RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 NCAPD2Q15021 1401 aa29.71■■■□□ 2.35
UBE2D3-214ENST00000503282 IGSF1Q8N6C5 1336 aa29.7■■■□□ 2.34
UBE2D3-214ENST00000503282 SBF2Q86WG5 1849 aa29.69■■■□□ 2.34
UBE2D3-214ENST00000503282 IL13P35225 146 aa29.68■■■□□ 2.34
UBE2D3-214ENST00000503282 ACSBG1Q96GR2 724 aa29.68■■■□□ 2.34
UBE2D3-214ENST00000503282 SPG7Q9UQ90 795 aa29.66■■■□□ 2.34
UBE2D3-214ENST00000503282 PCDH11XQ9BZA7 1347 aa29.66■■■□□ 2.34
UBE2D3-214ENST00000503282 PCDH11YQ9BZA8 1340 aa29.66■■■□□ 2.34
UBE2D3-214ENST00000503282 DIAPH1O60610 1272 aaKnown RBP29.65■■■□□ 2.34
UBE2D3-214ENST00000503282 EZH2Q15910 746 aaKnown RBP29.65■■■□□ 2.34
UBE2D3-214ENST00000503282 PTF1AQ7RTS3 328 aa29.65■■■□□ 2.34
UBE2D3-214ENST00000503282 KCNQ2O43526 872 aa29.64■■■□□ 2.34
UBE2D3-214ENST00000503282 CAMKK2Q96RR4 588 aa29.64■■■□□ 2.34
UBE2D3-214ENST00000503282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.63■■■□□ 2.33
UBE2D3-214ENST00000503282 PPP2R1AP30153 589 aa29.62■■■□□ 2.33
UBE2D3-214ENST00000503282 SULT6B1Q6IMI4 303 aa29.62■■■□□ 2.33
UBE2D3-214ENST00000503282 SHANK3Q9BYB0 1731 aa29.62■■■□□ 2.33
UBE2D3-214ENST00000503282 CFAP53Q96M91 514 aa29.61■■■□□ 2.33
UBE2D3-214ENST00000503282 PARD3Q8TEW0 1356 aa29.61■■■□□ 2.33
UBE2D3-214ENST00000503282 PLSCR1O15162 318 aa29.6■■■□□ 2.33
UBE2D3-214ENST00000503282 CYP27B1O15528 508 aa29.59■■■□□ 2.33
UBE2D3-214ENST00000503282 AEBP1Q8IUX7 1158 aa29.59■■■□□ 2.33
UBE2D3-214ENST00000503282 KAT6BQ8WYB5 2073 aa29.59■■■□□ 2.33
UBE2D3-214ENST00000503282 SYTL4Q96C24 671 aaPredicted RBP29.58■■■□□ 2.33
UBE2D3-214ENST00000503282 NHSQ6T4R5 1651 aa29.57■■■□□ 2.32
UBE2D3-214ENST00000503282 PLEKHG2Q9H7P9 1386 aa29.57■■■□□ 2.32
UBE2D3-214ENST00000503282 PLEKHO1Q53GL0 409 aaPredicted RBP29.57■■■□□ 2.32
UBE2D3-214ENST00000503282 PKD1L3Q7Z443 1732 aa29.57■■■□□ 2.32
UBE2D3-214ENST00000503282 PRIM1P49642 420 aaKnown RBP29.56■■■□□ 2.32
UBE2D3-214ENST00000503282 AMOTQ4VCS5 1084 aa29.55■■■□□ 2.32
UBE2D3-214ENST00000503282 IFNL2Q8IZJ0 200 aa29.55■■■□□ 2.32
UBE2D3-214ENST00000503282 KDRP35968 1356 aa29.54■■■□□ 2.32
UBE2D3-214ENST00000503282 U2SURPO15042 1029 aaKnown RBP29.54■■■□□ 2.32
UBE2D3-214ENST00000503282 ZNF316A6NFI3 1004 aaPredicted RBP29.53■■■□□ 2.32
UBE2D3-214ENST00000503282 HMOX1P09601 288 aa29.53■■■□□ 2.32
UBE2D3-214ENST00000503282 COL3A1P02461 1466 aaPredicted RBP29.52■■■□□ 2.32
UBE2D3-214ENST00000503282 PHKG2P15735 406 aa29.51■■■□□ 2.31
UBE2D3-214ENST00000503282 NKX1-1Q15270 411 aaPredicted RBP29.51■■■□□ 2.31
UBE2D3-214ENST00000503282 RALBP1Q15311 655 aa29.51■■■□□ 2.31
UBE2D3-214ENST00000503282 NUDCQ9Y266 331 aa29.51■■■□□ 2.31
UBE2D3-214ENST00000503282 DOT1LQ8TEK3 1739 aa29.5■■■□□ 2.31
UBE2D3-214ENST00000503282 RGPD3A6NKT7 1758 aaPredicted RBP29.48■■■□□ 2.31
UBE2D3-214ENST00000503282 RGPD4Q7Z3J3 1758 aa29.48■■■□□ 2.31
UBE2D3-214ENST00000503282 BTAF1O14981 1849 aa29.48■■■□□ 2.31
UBE2D3-214ENST00000503282 NBPF14Q5TI25 921 aa29.47■■■□□ 2.31
UBE2D3-214ENST00000503282 ZNF530Q6P9A1 599 aaPredicted RBP29.47■■■□□ 2.31
UBE2D3-214ENST00000503282 TXNRD1Q16881 649 aa29.46■■■□□ 2.31
UBE2D3-214ENST00000503282 PROM2Q8N271 834 aa29.46■■■□□ 2.31
UBE2D3-214ENST00000503282 RREB1Q92766 1687 aa29.45■■■□□ 2.31
UBE2D3-214ENST00000503282 HSP90AB1P08238 724 aaKnown RBP29.45■■■□□ 2.31
UBE2D3-214ENST00000503282 C1orf141Q5JVX7 400 aa29.45■■■□□ 2.31
UBE2D3-214ENST00000503282 MPRIPQ6WCQ1 1025 aa29.45■■■□□ 2.31
UBE2D3-214ENST00000503282 DCAF5Q96JK2 942 aa29.41■■■□□ 2.3
UBE2D3-214ENST00000503282 NUP188Q5SRE5 1749 aa29.4■■■□□ 2.3
UBE2D3-214ENST00000503282 PSDA5PKW4 1024 aaPredicted RBP29.4■■■□□ 2.3
UBE2D3-214ENST00000503282 U2AF1L5P0DN76 240 aaPredicted RBP29.4■■■□□ 2.3
UBE2D3-214ENST00000503282 U2AF1Q01081 240 aaKnown RBP eCLIP29.4■■■□□ 2.32e-12■□□□□ 11.1
UBE2D3-214ENST00000503282 R3HDM1Q15032 1099 aaKnown RBP29.39■■■□□ 2.3
UBE2D3-214ENST00000503282 TMOD3Q9NYL9 352 aa29.38■■■□□ 2.29
UBE2D3-214ENST00000503282 TOGARAM1Q9Y4F4 1720 aa29.37■■■□□ 2.29
UBE2D3-214ENST00000503282 AKAP4Q5JQC9 854 aa29.37■■■□□ 2.29
UBE2D3-214ENST00000503282 PIGBQ92521 554 aa29.37■■■□□ 2.29
UBE2D3-214ENST00000503282 MYBBP1AQ9BQG0 1328 aaKnown RBP29.37■■■□□ 2.29
UBE2D3-214ENST00000503282 ERVV-2B6SEH9 535 aa29.36■■■□□ 2.29
UBE2D3-214ENST00000503282 MTHFSDQ2M296 383 aaKnown RBP29.36■■■□□ 2.29
UBE2D3-214ENST00000503282 SLC27A3Q5K4L6 730 aa29.36■■■□□ 2.29
UBE2D3-214ENST00000503282 ITGB4P16144 1822 aa29.36■■■□□ 2.29
UBE2D3-214ENST00000503282 PRKAR2BP31323 418 aa29.34■■■□□ 2.29
UBE2D3-214ENST00000503282 SMARCC1Q92922 1105 aaPredicted RBP29.34■■■□□ 2.29
UBE2D3-214ENST00000503282 RSPH6AQ9H0K4 717 aa29.34■■■□□ 2.29
UBE2D3-214ENST00000503282 PRKRIP1Q9H875 184 aaPredicted RBP29.34■■■□□ 2.29
UBE2D3-214ENST00000503282 FCHSD2O94868 740 aa29.33■■■□□ 2.29
UBE2D3-214ENST00000503282 CABP4P57796 275 aa29.32■■■□□ 2.28
UBE2D3-214ENST00000503282 LRRC4BQ9NT99 713 aa29.32■■■□□ 2.28
UBE2D3-214ENST00000503282 GAS2L2Q8NHY3 880 aa29.31■■■□□ 2.28
UBE2D3-214ENST00000503282 STK32BQ9NY57 414 aa29.31■■■□□ 2.28
UBE2D3-214ENST00000503282 KDM6AO15550 1401 aaPredicted RBP29.3■■■□□ 2.28
UBE2D3-214ENST00000503282 CCNL1Q9UK58 526 aaPredicted RBP29.3■■■□□ 2.28
UBE2D3-214ENST00000503282 PALLDQ8WX93 1383 aa29.29■■■□□ 2.28
UBE2D3-214ENST00000503282 ANO8Q9HCE9 1232 aaPredicted RBP29.29■■■□□ 2.28
UBE2D3-214ENST00000503282 KCNQ4P56696 695 aa29.28■■■□□ 2.28
UBE2D3-214ENST00000503282 PHACTR3Q96KR7 559 aa29.28■■■□□ 2.28
UBE2D3-214ENST00000503282 LY75O60449 1722 aa29.28■■■□□ 2.28
UBE2D3-214ENST00000503282 SLC15A2Q16348 729 aa29.27■■■□□ 2.28
UBE2D3-214ENST00000503282 ASAP1Q9ULH1 1129 aa29.27■■■□□ 2.28
UBE2D3-214ENST00000503282 NFATC2IPQ8NCF5 419 aa29.26■■■□□ 2.27
UBE2D3-214ENST00000503282 LGR6Q9HBX8 967 aa29.26■■■□□ 2.27
UBE2D3-214ENST00000503282 RNMTO43148 476 aaKnown RBP29.25■■■□□ 2.27
UBE2D3-214ENST00000503282 NEFMP07197 916 aa29.25■■■□□ 2.27
UBE2D3-214ENST00000503282 HMGB2P26583 209 aaKnown RBP29.25■■■□□ 2.27
UBE2D3-214ENST00000503282 ATG3Q9NT62 314 aa29.25■■■□□ 2.27
UBE2D3-214ENST00000503282 GNAT3A8MTJ3 354 aa29.24■■■□□ 2.27
UBE2D3-214ENST00000503282 PNNQ9H307 717 aaKnown RBP29.24■■■□□ 2.27
UBE2D3-214ENST00000503282 SCN11AQ9UI33 1791 aa29.22■■■□□ 2.27
UBE2D3-214ENST00000503282 SLC52A2Q9HAB3 445 aa29.21■■■□□ 2.27
UBE2D3-214ENST00000503282 MAP3K5Q99683 1374 aa29.21■■■□□ 2.27
UBE2D3-214ENST00000503282 LOC102724428A0A0B4J2F2 783 aa29.19■■■□□ 2.26
UBE2D3-214ENST00000503282 SIK1P57059 783 aa29.19■■■□□ 2.26
UBE2D3-214ENST00000503282 AKT1S1Q96B36 256 aa29.19■■■□□ 2.26
UBE2D3-214ENST00000503282 PAPPAQ13219 1627 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms