RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.23
YIPF3-209ENST00000500090 PARD3Q8TEW0 1356 aa16.51■□□□□ 0.23
YIPF3-209ENST00000500090 TRIM37O94972 964 aa16.5■□□□□ 0.23
YIPF3-209ENST00000500090 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
YIPF3-209ENST00000500090 BAG6P46379 1132 aa16.49■□□□□ 0.23
YIPF3-209ENST00000500090 SPG7Q9UQ90 795 aa16.49■□□□□ 0.23
YIPF3-209ENST00000500090 BCL11BQ9C0K0 894 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-209ENST00000500090 PCDH11XQ9BZA7 1347 aa16.47■□□□□ 0.23
YIPF3-209ENST00000500090 PCDH11YQ9BZA8 1340 aa16.47■□□□□ 0.23
YIPF3-209ENST00000500090 SULT6B1Q6IMI4 303 aa16.47■□□□□ 0.23
YIPF3-209ENST00000500090 RGPD1P0DJD0 1748 aa16.47■□□□□ 0.23
YIPF3-209ENST00000500090 AMOTQ4VCS5 1084 aa16.46■□□□□ 0.23
YIPF3-209ENST00000500090 NUDCQ9Y266 331 aa16.46■□□□□ 0.23
YIPF3-209ENST00000500090 KDRP35968 1356 aa16.46■□□□□ 0.23
YIPF3-209ENST00000500090 APBA3O96018 575 aa16.45■□□□□ 0.22
YIPF3-209ENST00000500090 PLEKHO1Q53GL0 409 aaPredicted RBP16.45■□□□□ 0.22
YIPF3-209ENST00000500090 KAT6BQ8WYB5 2073 aa16.45■□□□□ 0.22
YIPF3-209ENST00000500090 COL3A1P02461 1466 aaPredicted RBP16.44■□□□□ 0.22
YIPF3-209ENST00000500090 DEFB132Q7Z7B7 95 aa16.44■□□□□ 0.22
YIPF3-209ENST00000500090 AEBP1Q8IUX7 1158 aa16.44■□□□□ 0.22
YIPF3-209ENST00000500090 SBF2Q86WG5 1849 aa16.43■□□□□ 0.22
YIPF3-209ENST00000500090 U2SURPO15042 1029 aaKnown RBP16.43■□□□□ 0.22
YIPF3-209ENST00000500090 CYP27B1O15528 508 aa16.43■□□□□ 0.22
YIPF3-209ENST00000500090 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
YIPF3-209ENST00000500090 PLSCR1O15162 318 aa16.42■□□□□ 0.22
YIPF3-209ENST00000500090 NKX1-1Q15270 411 aaPredicted RBP16.42■□□□□ 0.22
YIPF3-209ENST00000500090 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
YIPF3-209ENST00000500090 KCNQ2O43526 872 aa16.41■□□□□ 0.22
YIPF3-209ENST00000500090 HMOX1P09601 288 aa16.41■□□□□ 0.22
YIPF3-209ENST00000500090 EN1Q05925 392 aaPredicted RBP16.41■□□□□ 0.22
YIPF3-209ENST00000500090 ACSBG1Q96GR2 724 aa16.41■□□□□ 0.22
YIPF3-209ENST00000500090 SHANK3Q9BYB0 1731 aa16.41■□□□□ 0.22
YIPF3-209ENST00000500090 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
YIPF3-209ENST00000500090 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
YIPF3-209ENST00000500090 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
YIPF3-209ENST00000500090 PHKG2P15735 406 aa16.4■□□□□ 0.22
YIPF3-209ENST00000500090 CAMKK2Q96RR4 588 aa16.4■□□□□ 0.22
YIPF3-209ENST00000500090 PRKRIP1Q9H875 184 aaPredicted RBP16.4■□□□□ 0.22
YIPF3-209ENST00000500090 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
YIPF3-209ENST00000500090 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
YIPF3-209ENST00000500090 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
YIPF3-209ENST00000500090 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
YIPF3-209ENST00000500090 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
YIPF3-209ENST00000500090 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
YIPF3-209ENST00000500090 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
YIPF3-209ENST00000500090 FCHSD2O94868 740 aa16.37■□□□□ 0.21
YIPF3-209ENST00000500090 EZH2Q15910 746 aaKnown RBP16.37■□□□□ 0.21
YIPF3-209ENST00000500090 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
YIPF3-209ENST00000500090 DCAF5Q96JK2 942 aa16.36■□□□□ 0.21
YIPF3-209ENST00000500090 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
YIPF3-209ENST00000500090 ERVV-2B6SEH9 535 aa16.34■□□□□ 0.21
YIPF3-209ENST00000500090 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
YIPF3-209ENST00000500090 PNNQ9H307 717 aaKnown RBP16.34■□□□□ 0.21
YIPF3-209ENST00000500090 ANP32CO43423 234 aa16.33■□□□□ 0.2
YIPF3-209ENST00000500090 MPRIPQ6WCQ1 1025 aa16.33■□□□□ 0.2
YIPF3-209ENST00000500090 GAS2L2Q8NHY3 880 aa16.33■□□□□ 0.2
YIPF3-209ENST00000500090 RGPD3A6NKT7 1758 aaPredicted RBP16.33■□□□□ 0.2
YIPF3-209ENST00000500090 RGPD4Q7Z3J3 1758 aa16.33■□□□□ 0.2
YIPF3-209ENST00000500090 PRKAR2BP31323 418 aa16.32■□□□□ 0.2
YIPF3-209ENST00000500090 MTHFSDQ2M296 383 aaKnown RBP16.32■□□□□ 0.2
YIPF3-209ENST00000500090 DOT1LQ8TEK3 1739 aa16.32■□□□□ 0.2
YIPF3-209ENST00000500090 BTAF1O14981 1849 aa16.31■□□□□ 0.2
YIPF3-209ENST00000500090 NEFMP07197 916 aa16.31■□□□□ 0.2
YIPF3-209ENST00000500090 HMGB2P26583 209 aaKnown RBP16.31■□□□□ 0.2
YIPF3-209ENST00000500090 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
YIPF3-209ENST00000500090 PROM2Q8N271 834 aa16.31■□□□□ 0.2
YIPF3-209ENST00000500090 SMARCC1Q92922 1105 aaPredicted RBP16.31■□□□□ 0.2
YIPF3-209ENST00000500090 TMOD3Q9NYL9 352 aa16.31■□□□□ 0.2
YIPF3-209ENST00000500090 SLC27A3Q5K4L6 730 aa16.3■□□□□ 0.2
YIPF3-209ENST00000500090 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
YIPF3-209ENST00000500090 PIGBQ92521 554 aa16.3■□□□□ 0.2
YIPF3-209ENST00000500090 CABP4P57796 275 aa16.29■□□□□ 0.2
YIPF3-209ENST00000500090 PHACTR3Q96KR7 559 aa16.29■□□□□ 0.2
YIPF3-209ENST00000500090 ITGB4P16144 1822 aa16.28■□□□□ 0.2
YIPF3-209ENST00000500090 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
YIPF3-209ENST00000500090 RREB1Q92766 1687 aa16.27■□□□□ 0.2
YIPF3-209ENST00000500090 GNAT3A8MTJ3 354 aa16.27■□□□□ 0.2
YIPF3-209ENST00000500090 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
YIPF3-209ENST00000500090 TOGARAM1Q9Y4F4 1720 aa16.27■□□□□ 0.19
YIPF3-209ENST00000500090 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
YIPF3-209ENST00000500090 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
YIPF3-209ENST00000500090 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
YIPF3-209ENST00000500090 NFATC2IPQ8NCF5 419 aa16.25■□□□□ 0.19
YIPF3-209ENST00000500090 LGR6Q9HBX8 967 aa16.25■□□□□ 0.19
YIPF3-209ENST00000500090 PALLDQ8WX93 1383 aa16.25■□□□□ 0.19
YIPF3-209ENST00000500090 HTATSF1O43719 755 aaKnown RBP16.24■□□□□ 0.19
YIPF3-209ENST00000500090 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
YIPF3-209ENST00000500090 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
YIPF3-209ENST00000500090 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
YIPF3-209ENST00000500090 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
YIPF3-209ENST00000500090 NUP188Q5SRE5 1749 aa16.24■□□□□ 0.19
YIPF3-209ENST00000500090 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
YIPF3-209ENST00000500090 MAPK8IP3Q9UPT6 1336 aa16.23■□□□□ 0.19
YIPF3-209ENST00000500090 ATG3Q9NT62 314 aa16.23■□□□□ 0.19
YIPF3-209ENST00000500090 LRRC4BQ9NT99 713 aa16.23■□□□□ 0.19
YIPF3-209ENST00000500090 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
YIPF3-209ENST00000500090 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
YIPF3-209ENST00000500090 LY75O60449 1722 aa16.22■□□□□ 0.19
YIPF3-209ENST00000500090 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
YIPF3-209ENST00000500090 SIK1P57059 783 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms