RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 MPHOSPH10O00566 681 aaKnown RBP13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 NACAP1Q9BZK3 213 aa13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 CEP131Q9UPN4 1083 aa13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 NCAPGQ9BPX3 1015 aa13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 IQCGQ9H095 443 aaKnown RBP13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 CFAP58Q5T655 872 aa13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 DNAJC2Q99543 621 aaKnown RBP13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 KIF20AO95235 890 aa13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 KIAA1524Q8TCG1 905 aa13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 ME1P48163 572 aa13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 ZBTB17Q13105 803 aa13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 TDRD9Q8NDG6 1382 aaKnown RBP13.03□□□□□ -0.32
AC055713.1-201ENST00000498967 AIMP1Q12904 312 aaKnown RBP13.02□□□□□ -0.32
AC055713.1-201ENST00000498967 FKBP15Q5T1M5 1219 aa13.02□□□□□ -0.32
AC055713.1-201ENST00000498967 WDR63Q8IWG1 891 aa13.02□□□□□ -0.32
AC055713.1-201ENST00000498967 SEPT14Q6ZU15 432 aa13.02□□□□□ -0.32
AC055713.1-201ENST00000498967 PPFIBP2Q8ND30 876 aa13.02□□□□□ -0.32
AC055713.1-201ENST00000498967 GOPCQ9HD26 462 aa13.02□□□□□ -0.32
AC055713.1-201ENST00000498967 GOLGA4Q13439 2230 aaKnown RBP13.02□□□□□ -0.32
AC055713.1-201ENST00000498967 MGEA5O60502 916 aa13.02□□□□□ -0.32
AC055713.1-201ENST00000498967 VIMP08670 466 aaKnown RBP13.02□□□□□ -0.32
AC055713.1-201ENST00000498967 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 L3MBTL2Q969R5 705 aa13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 WDR33Q9C0J8 1336 aaKnown RBP13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 SPC24Q8NBT2 197 aa13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 SFPQP23246 707 aaKnown RBP eCLIP13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 GTF2A1P52655 376 aaPredicted RBP13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 SH2D4BQ5SQS7 431 aa13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 FAM177A1Q8N128 213 aaPredicted RBP13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 TPD52P55327 224 aaPredicted RBP13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 GBP7Q8N8V2 638 aaPredicted RBP13.02□□□□□ -0.33
AC055713.1-201ENST00000498967 CCDC155Q8N6L0 562 aa13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 ODF2LQ9ULJ1 636 aa13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 TUBB4BP68371 445 aa13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 WASF1Q92558 559 aa13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 MRPS9P82933 396 aaKnown RBP13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 RNF168Q8IYW5 571 aaPredicted RBP13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 ALS2CR12Q96Q35 445 aa13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 CEP120Q8N960 986 aa13.01□□□□□ -0.33
AC055713.1-201ENST00000498967 CDC45O75419 566 aa13□□□□□ -0.33
AC055713.1-201ENST00000498967 KIF4BQ2VIQ3 1234 aa13□□□□□ -0.33
AC055713.1-201ENST00000498967 PTPN14Q15678 1187 aa13□□□□□ -0.33
AC055713.1-201ENST00000498967 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
AC055713.1-201ENST00000498967 RBM25P49756 843 aaKnown RBP13□□□□□ -0.33
AC055713.1-201ENST00000498967 CASQ1P31415 396 aa13□□□□□ -0.33
AC055713.1-201ENST00000498967 IFI16Q16666 785 aaKnown RBP13□□□□□ -0.33
AC055713.1-201ENST00000498967 KIF5BP33176 963 aa13□□□□□ -0.33
AC055713.1-201ENST00000498967 CKAP4Q07065 602 aaKnown RBP13□□□□□ -0.33
AC055713.1-201ENST00000498967 FOXD1Q16676 465 aa13□□□□□ -0.33
AC055713.1-201ENST00000498967 RAB34Q9BZG1 259 aa13□□□□□ -0.33
AC055713.1-201ENST00000498967 EHBP1Q8NDI1 1231 aa13□□□□□ -0.33
AC055713.1-201ENST00000498967 RAB3IPQ96QF0 476 aaPredicted RBP13□□□□□ -0.33
AC055713.1-201ENST00000498967 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
AC055713.1-201ENST00000498967 UPF3BQ9BZI7 483 aaKnown RBP12.99□□□□□ -0.33
AC055713.1-201ENST00000498967 ZNF287Q9HBT7 754 aa12.99□□□□□ -0.33
AC055713.1-201ENST00000498967 LUC7L2Q9Y383 392 aaKnown RBP12.99□□□□□ -0.33
AC055713.1-201ENST00000498967 RFC1P35251 1148 aaPredicted RBP12.99□□□□□ -0.33
AC055713.1-201ENST00000498967 PSMC4P43686 418 aa12.99□□□□□ -0.33
AC055713.1-201ENST00000498967 TSG101Q99816 390 aa12.99□□□□□ -0.33
AC055713.1-201ENST00000498967 SEPT8Q92599 483 aa12.99□□□□□ -0.33
AC055713.1-201ENST00000498967 DIAPH1O60610 1272 aaKnown RBP12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 VCX3BQ9H321 246 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 COG3Q96JB2 828 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 A0A1W2PRG0 241 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 TTC36A6NLP5 189 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 NDC80O14777 642 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 MXRA7P84157 204 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 CACNA2D4Q7Z3S7 1137 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 CCDC144AA2RUR9 1427 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 CTNNBL1Q8WYA6 563 aaPredicted RBP12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 NEMFO60524 1076 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 CCDC172P0C7W6 258 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 FOSBP53539 338 aa12.98□□□□□ -0.33
AC055713.1-201ENST00000498967 FKBP5Q13451 457 aaPredicted RBP12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 HLTFQ14527 1009 aaKnown RBP eCLIP12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 CCDC178Q5BJE1 867 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 RSRC1Q96IZ7 334 aaKnown RBP12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 MSL1Q68DK7 614 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 WASHC2CQ9Y4E1 1318 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 RBM10P98175 930 aaKnown RBP12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 NEUROD6Q96NK8 337 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 SNX16P57768 344 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 CBX1P83916 185 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 SATB1Q01826 763 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
AC055713.1-201ENST00000498967 ATP2A1O14983 1001 aa12.96□□□□□ -0.33
AC055713.1-201ENST00000498967 ATP2B1P20020 1258 aa12.96□□□□□ -0.33
AC055713.1-201ENST00000498967 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms