RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 NBPF4Q96M43 638 aa23.38■■□□□ 1.33
AP004609.1-201ENST00000498872 DOT1LQ8TEK3 1739 aa23.38■■□□□ 1.33
AP004609.1-201ENST00000498872 HSP90AB2PQ58FF8 381 aa23.37■■□□□ 1.33
AP004609.1-201ENST00000498872 SPON1Q9HCB6 807 aa23.37■■□□□ 1.33
AP004609.1-201ENST00000498872 SMG6Q86US8 1419 aaKnown RBP23.36■■□□□ 1.33
AP004609.1-201ENST00000498872 EMILIN1Q9Y6C2 1016 aa23.35■■□□□ 1.33
AP004609.1-201ENST00000498872 SYTL4Q96C24 671 aaPredicted RBP23.34■■□□□ 1.33
AP004609.1-201ENST00000498872 STK32BQ9NY57 414 aa23.34■■□□□ 1.33
AP004609.1-201ENST00000498872 ZCRB1Q8TBF4 217 aaKnown RBP23.33■■□□□ 1.33
AP004609.1-201ENST00000498872 FLT4P35916 1363 aa23.33■■□□□ 1.33
AP004609.1-201ENST00000498872 MAP2P11137 1827 aaKnown RBP23.33■■□□□ 1.33
AP004609.1-201ENST00000498872 PPM1GO15355 546 aaPredicted RBP23.33■■□□□ 1.32
AP004609.1-201ENST00000498872 SLC15A2Q16348 729 aa23.33■■□□□ 1.32
AP004609.1-201ENST00000498872 PPP1R1BQ9UD71 204 aaPredicted RBP23.33■■□□□ 1.32
AP004609.1-201ENST00000498872 INSRP06213 1382 aa23.33■■□□□ 1.32
AP004609.1-201ENST00000498872 ZBTB7AO95365 584 aa23.32■■□□□ 1.32
AP004609.1-201ENST00000498872 PAPPAQ13219 1627 aa23.31■■□□□ 1.32
AP004609.1-201ENST00000498872 PRIM1P49642 420 aaKnown RBP23.3■■□□□ 1.32
AP004609.1-201ENST00000498872 ANKRD26Q9UPS8 1709 aa23.3■■□□□ 1.32
AP004609.1-201ENST00000498872 RAPGEF4Q8WZA2 1011 aa23.3■■□□□ 1.32
AP004609.1-201ENST00000498872 LRRC4BQ9NT99 713 aa23.3■■□□□ 1.32
AP004609.1-201ENST00000498872 CGNL1Q0VF96 1302 aa23.29■■□□□ 1.32
AP004609.1-201ENST00000498872 YTHDC1Q96MU7 727 aaKnown RBP23.28■■□□□ 1.32
AP004609.1-201ENST00000498872 ATF5Q9Y2D1 282 aaPredicted RBP23.28■■□□□ 1.32
AP004609.1-201ENST00000498872 WASHC2AQ641Q2 1341 aa23.28■■□□□ 1.32
AP004609.1-201ENST00000498872 KIF24Q5T7B8 1368 aa23.27■■□□□ 1.32
AP004609.1-201ENST00000498872 KCNQ4P56696 695 aa23.27■■□□□ 1.32
AP004609.1-201ENST00000498872 TATP17735 454 aaPredicted RBP23.26■■□□□ 1.31
AP004609.1-201ENST00000498872 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
AP004609.1-201ENST00000498872 NSD2O96028 1365 aa23.25■■□□□ 1.31
AP004609.1-201ENST00000498872 ZNF827Q17R98 1081 aa23.25■■□□□ 1.31
AP004609.1-201ENST00000498872 LY75O60449 1722 aa23.24■■□□□ 1.31
AP004609.1-201ENST00000498872 PANK3Q9H999 370 aa23.22■■□□□ 1.31
AP004609.1-201ENST00000498872 PTGER2P43116 358 aa23.22■■□□□ 1.31
AP004609.1-201ENST00000498872 TUBGCP6Q96RT7 1819 aa23.21■■□□□ 1.31
AP004609.1-201ENST00000498872 POLKQ9UBT6 870 aa23.21■■□□□ 1.31
AP004609.1-201ENST00000498872 PCDH11XQ9BZA7 1347 aa23.2■■□□□ 1.3
AP004609.1-201ENST00000498872 PCDH11YQ9BZA8 1340 aa23.2■■□□□ 1.3
AP004609.1-201ENST00000498872 ANP32CO43423 234 aa23.2■■□□□ 1.3
AP004609.1-201ENST00000498872 PKD1L3Q7Z443 1732 aa23.2■■□□□ 1.3
AP004609.1-201ENST00000498872 TOGARAM1Q9Y4F4 1720 aa23.19■■□□□ 1.3
AP004609.1-201ENST00000498872 SLC27A3Q5K4L6 730 aa23.19■■□□□ 1.3
AP004609.1-201ENST00000498872 CYP27B1O15528 508 aa23.18■■□□□ 1.3
AP004609.1-201ENST00000498872 MTFR1LQ9H019 292 aa23.18■■□□□ 1.3
AP004609.1-201ENST00000498872 ITGB4P16144 1822 aa23.18■■□□□ 1.3
AP004609.1-201ENST00000498872 AKT1S1Q96B36 256 aa23.17■■□□□ 1.3
AP004609.1-201ENST00000498872 EYA1Q99502 592 aa23.17■■□□□ 1.3
AP004609.1-201ENST00000498872 CCNL1Q9UK58 526 aaPredicted RBP23.15■■□□□ 1.3
AP004609.1-201ENST00000498872 NCAPD2Q15021 1401 aa23.15■■□□□ 1.3
AP004609.1-201ENST00000498872 QSER1Q2KHR3 1735 aa23.15■■□□□ 1.3
AP004609.1-201ENST00000498872 CCER2I3L3R5 266 aa23.15■■□□□ 1.3
AP004609.1-201ENST00000498872 MPRIPQ6WCQ1 1025 aa23.15■■□□□ 1.3
AP004609.1-201ENST00000498872 KIF7Q2M1P5 1343 aa23.14■■□□□ 1.3
AP004609.1-201ENST00000498872 TFCP2L1Q9NZI6 479 aa23.14■■□□□ 1.29
AP004609.1-201ENST00000498872 EIF4A2Q14240 407 aaKnown RBP23.13■■□□□ 1.29
AP004609.1-201ENST00000498872 SGIP1Q9BQI5 828 aa23.13■■□□□ 1.29
AP004609.1-201ENST00000498872 PNPLA7Q6ZV29 1317 aa23.13■■□□□ 1.29
AP004609.1-201ENST00000498872 FHDC1Q9C0D6 1143 aaPredicted RBP23.12■■□□□ 1.29
AP004609.1-201ENST00000498872 C5P01031 1676 aa23.11■■□□□ 1.29
AP004609.1-201ENST00000498872 SPG7Q9UQ90 795 aa23.11■■□□□ 1.29
AP004609.1-201ENST00000498872 TAF1LQ8IZX4 1826 aa23.09■■□□□ 1.29
AP004609.1-201ENST00000498872 PALLDQ8WX93 1383 aa23.09■■□□□ 1.29
AP004609.1-201ENST00000498872 MORC1Q86VD1 984 aa23.08■■□□□ 1.29
AP004609.1-201ENST00000498872 SYT17Q9BSW7 474 aa23.08■■□□□ 1.29
AP004609.1-201ENST00000498872 UTRNP46939 3433 aa23.08■■□□□ 1.29
AP004609.1-201ENST00000498872 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.28
AP004609.1-201ENST00000498872 ARXQ96QS3 562 aa23.08■■□□□ 1.28
AP004609.1-201ENST00000498872 KNSTRNQ9Y448 316 aa23.07■■□□□ 1.28
AP004609.1-201ENST00000498872 MSH5O43196 834 aa23.06■■□□□ 1.28
AP004609.1-201ENST00000498872 PIGBQ92521 554 aa23.05■■□□□ 1.28
AP004609.1-201ENST00000498872 NKX1-1Q15270 411 aaPredicted RBP23.04■■□□□ 1.28
AP004609.1-201ENST00000498872 KLHL34Q8N239 644 aa23.04■■□□□ 1.28
AP004609.1-201ENST00000498872 SLC16A10Q8TF71 515 aa23.04■■□□□ 1.28
AP004609.1-201ENST00000498872 IGSF1Q8N6C5 1336 aa23.04■■□□□ 1.28
AP004609.1-201ENST00000498872 COL24A1Q17RW2 1714 aa23.03■■□□□ 1.28
AP004609.1-201ENST00000498872 PHKG2P15735 406 aa23.03■■□□□ 1.28
AP004609.1-201ENST00000498872 YY1P25490 414 aa23.03■■□□□ 1.28
AP004609.1-201ENST00000498872 IFNL2Q8IZJ0 200 aa23.03■■□□□ 1.28
AP004609.1-201ENST00000498872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.03■■□□□ 1.28
AP004609.1-201ENST00000498872 COL23A1Q86Y22 540 aaPredicted RBP23.02■■□□□ 1.28
AP004609.1-201ENST00000498872 C4BP0C0L5 1744 aa23.01■■□□□ 1.27
AP004609.1-201ENST00000498872 TMOD3Q9NYL9 352 aa23■■□□□ 1.27
AP004609.1-201ENST00000498872 POLD1P28340 1107 aa23■■□□□ 1.27
AP004609.1-201ENST00000498872 AEBP1Q8IUX7 1158 aa23■■□□□ 1.27
AP004609.1-201ENST00000498872 SMARCC1Q92922 1105 aaPredicted RBP23■■□□□ 1.27
AP004609.1-201ENST00000498872 AMER1Q5JTC6 1135 aaPredicted RBP22.99■■□□□ 1.27
AP004609.1-201ENST00000498872 GOLGB1Q14789 3259 aaKnown RBP22.99■■□□□ 1.27
AP004609.1-201ENST00000498872 MSL1Q68DK7 614 aa22.98■■□□□ 1.27
AP004609.1-201ENST00000498872 ASAP1Q9ULH1 1129 aa22.98■■□□□ 1.27
AP004609.1-201ENST00000498872 SMIM5Q71RC9 77 aa22.97■■□□□ 1.27
AP004609.1-201ENST00000498872 UBR3Q6ZT12 1888 aa22.96■■□□□ 1.27
AP004609.1-201ENST00000498872 CNGB1Q14028 1251 aaPredicted RBP22.96■■□□□ 1.27
AP004609.1-201ENST00000498872 AMIGO3Q86WK7 504 aa22.96■■□□□ 1.27
AP004609.1-201ENST00000498872 AK7Q96M32 723 aa22.95■■□□□ 1.26
AP004609.1-201ENST00000498872 LOC102724428A0A0B4J2F2 783 aa22.94■■□□□ 1.26
AP004609.1-201ENST00000498872 PHF14O94880 888 aa22.94■■□□□ 1.26
AP004609.1-201ENST00000498872 SIK1P57059 783 aa22.94■■□□□ 1.26
AP004609.1-201ENST00000498872 CC2D1BQ5T0F9 858 aaKnown RBP22.94■■□□□ 1.26
AP004609.1-201ENST00000498872 SULT6B1Q6IMI4 303 aa22.94■■□□□ 1.26
AP004609.1-201ENST00000498872 MAP3K5Q99683 1374 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms