RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 ANO8Q9HCE9 1232 aaPredicted RBP23.37■■□□□ 1.33
CDKN2A-209ENST00000498628 SYTL4Q96C24 671 aaPredicted RBP23.36■■□□□ 1.33
CDKN2A-209ENST00000498628 USHBP1Q8N6Y0 703 aa23.35■■□□□ 1.33
CDKN2A-209ENST00000498628 EMILIN1Q9Y6C2 1016 aa23.35■■□□□ 1.33
CDKN2A-209ENST00000498628 PRIM1P49642 420 aaKnown RBP23.33■■□□□ 1.33
CDKN2A-209ENST00000498628 SLC27A3Q5K4L6 730 aa23.33■■□□□ 1.33
CDKN2A-209ENST00000498628 PANK3Q9H999 370 aa23.33■■□□□ 1.33
CDKN2A-209ENST00000498628 KAT6BQ8WYB5 2073 aa23.32■■□□□ 1.32
CDKN2A-209ENST00000498628 MEGF6O75095 1541 aa23.32■■□□□ 1.32
CDKN2A-209ENST00000498628 WASHC2AQ641Q2 1341 aa23.32■■□□□ 1.32
CDKN2A-209ENST00000498628 PCDH11XQ9BZA7 1347 aa23.31■■□□□ 1.32
CDKN2A-209ENST00000498628 PCDH11YQ9BZA8 1340 aa23.31■■□□□ 1.32
CDKN2A-209ENST00000498628 RGPD2P0DJD1 1756 aa23.3■■□□□ 1.32
CDKN2A-209ENST00000498628 HMGB2P26583 209 aaKnown RBP23.3■■□□□ 1.32
CDKN2A-209ENST00000498628 DCAF8L1A6NGE4 600 aa23.29■■□□□ 1.32
CDKN2A-209ENST00000498628 BTAF1O14981 1849 aa23.29■■□□□ 1.32
CDKN2A-209ENST00000498628 POLKQ9UBT6 870 aa23.28■■□□□ 1.32
CDKN2A-209ENST00000498628 NSD2O96028 1365 aa23.27■■□□□ 1.32
CDKN2A-209ENST00000498628 ZBTB7AO95365 584 aa23.27■■□□□ 1.32
CDKN2A-209ENST00000498628 TNNT2P45379 298 aaPredicted RBP23.27■■□□□ 1.32
CDKN2A-209ENST00000498628 SPG7Q9UQ90 795 aa23.26■■□□□ 1.31
CDKN2A-209ENST00000498628 MTFR1LQ9H019 292 aa23.25■■□□□ 1.31
CDKN2A-209ENST00000498628 KNSTRNQ9Y448 316 aa23.25■■□□□ 1.31
CDKN2A-209ENST00000498628 LRRC4BQ9NT99 713 aa23.24■■□□□ 1.31
CDKN2A-209ENST00000498628 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
CDKN2A-209ENST00000498628 MORC1Q86VD1 984 aa23.23■■□□□ 1.31
CDKN2A-209ENST00000498628 EYA1Q99502 592 aa23.23■■□□□ 1.31
CDKN2A-209ENST00000498628 PDGFDQ9GZP0 370 aaPredicted RBP23.23■■□□□ 1.31
CDKN2A-209ENST00000498628 MAP2P11137 1827 aaKnown RBP23.22■■□□□ 1.31
CDKN2A-209ENST00000498628 CASZ1Q86V15 1759 aa23.22■■□□□ 1.31
CDKN2A-209ENST00000498628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.21■■□□□ 1.31
CDKN2A-209ENST00000498628 CCNL1Q9UK58 526 aaPredicted RBP23.21■■□□□ 1.31
CDKN2A-209ENST00000498628 DOT1LQ8TEK3 1739 aa23.2■■□□□ 1.3
CDKN2A-209ENST00000498628 TFCP2L1Q9NZI6 479 aa23.2■■□□□ 1.3
CDKN2A-209ENST00000498628 SHANK3Q9BYB0 1731 aa23.19■■□□□ 1.3
CDKN2A-209ENST00000498628 ZNF827Q17R98 1081 aa23.19■■□□□ 1.3
CDKN2A-209ENST00000498628 SLC16A10Q8TF71 515 aa23.19■■□□□ 1.3
CDKN2A-209ENST00000498628 AKT1S1Q96B36 256 aa23.19■■□□□ 1.3
CDKN2A-209ENST00000498628 ANKRD26Q9UPS8 1709 aa23.19■■□□□ 1.3
CDKN2A-209ENST00000498628 NCAPD2Q15021 1401 aa23.18■■□□□ 1.3
CDKN2A-209ENST00000498628 CYP27B1O15528 508 aa23.18■■□□□ 1.3
CDKN2A-209ENST00000498628 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
CDKN2A-209ENST00000498628 MPRIPQ6WCQ1 1025 aa23.18■■□□□ 1.3
CDKN2A-209ENST00000498628 SMARCC1Q92922 1105 aaPredicted RBP23.18■■□□□ 1.3
CDKN2A-209ENST00000498628 PAPPAQ13219 1627 aa23.17■■□□□ 1.3
CDKN2A-209ENST00000498628 PTGER2P43116 358 aa23.16■■□□□ 1.3
CDKN2A-209ENST00000498628 NKX1-1Q15270 411 aaPredicted RBP23.16■■□□□ 1.3
CDKN2A-209ENST00000498628 IFNL2Q8IZJ0 200 aa23.16■■□□□ 1.3
CDKN2A-209ENST00000498628 PLEKHG2Q9H7P9 1386 aa23.14■■□□□ 1.3
CDKN2A-209ENST00000498628 KIF7Q2M1P5 1343 aa23.14■■□□□ 1.3
CDKN2A-209ENST00000498628 POLD1P28340 1107 aa23.13■■□□□ 1.29
CDKN2A-209ENST00000498628 KCNQ4P56696 695 aa23.13■■□□□ 1.29
CDKN2A-209ENST00000498628 ARXQ96QS3 562 aa23.12■■□□□ 1.29
CDKN2A-209ENST00000498628 LY75O60449 1722 aa23.11■■□□□ 1.29
CDKN2A-209ENST00000498628 PKD1L3Q7Z443 1732 aa23.11■■□□□ 1.29
CDKN2A-209ENST00000498628 PLEKHO1Q53GL0 409 aaPredicted RBP23.11■■□□□ 1.29
CDKN2A-209ENST00000498628 PALLDQ8WX93 1383 aa23.11■■□□□ 1.29
CDKN2A-209ENST00000498628 IGSF1Q8N6C5 1336 aa23.1■■□□□ 1.29
CDKN2A-209ENST00000498628 MSH5O43196 834 aa23.1■■□□□ 1.29
CDKN2A-209ENST00000498628 HSP90AB1P08238 724 aaKnown RBP23.1■■□□□ 1.29
CDKN2A-209ENST00000498628 PHKG2P15735 406 aa23.1■■□□□ 1.29
CDKN2A-209ENST00000498628 TMOD3Q9NYL9 352 aa23.1■■□□□ 1.29
CDKN2A-209ENST00000498628 PNPLA7Q6ZV29 1317 aa23.09■■□□□ 1.29
CDKN2A-209ENST00000498628 AMOTQ4VCS5 1084 aa23.09■■□□□ 1.29
CDKN2A-209ENST00000498628 FLAD1Q8NFF5 587 aa23.09■■□□□ 1.29
CDKN2A-209ENST00000498628 SGIP1Q9BQI5 828 aa23.09■■□□□ 1.29
CDKN2A-209ENST00000498628 FHDC1Q9C0D6 1143 aaPredicted RBP23.09■■□□□ 1.29
CDKN2A-209ENST00000498628 PIGBQ92521 554 aa23.08■■□□□ 1.29
CDKN2A-209ENST00000498628 SYT17Q9BSW7 474 aa23.08■■□□□ 1.29
CDKN2A-209ENST00000498628 AMER1Q5JTC6 1135 aaPredicted RBP23.07■■□□□ 1.28
CDKN2A-209ENST00000498628 QSER1Q2KHR3 1735 aa23.06■■□□□ 1.28
CDKN2A-209ENST00000498628 ERVV-2B6SEH9 535 aa23.03■■□□□ 1.28
CDKN2A-209ENST00000498628 DCAF5Q96JK2 942 aa23.03■■□□□ 1.28
CDKN2A-209ENST00000498628 AK7Q96M32 723 aa23.03■■□□□ 1.28
CDKN2A-209ENST00000498628 YY1P25490 414 aa23.02■■□□□ 1.28
CDKN2A-209ENST00000498628 C1orf141Q5JVX7 400 aa23.02■■□□□ 1.28
CDKN2A-209ENST00000498628 SULT6B1Q6IMI4 303 aa23.02■■□□□ 1.28
CDKN2A-209ENST00000498628 ZNF530Q6P9A1 599 aaPredicted RBP23.02■■□□□ 1.28
CDKN2A-209ENST00000498628 COL23A1Q86Y22 540 aaPredicted RBP23.02■■□□□ 1.28
CDKN2A-209ENST00000498628 LOC102724428A0A0B4J2F2 783 aa23.01■■□□□ 1.27
CDKN2A-209ENST00000498628 SIK1P57059 783 aa23.01■■□□□ 1.27
CDKN2A-209ENST00000498628 ITGB4P16144 1822 aa23.01■■□□□ 1.27
CDKN2A-209ENST00000498628 MAP3K5Q99683 1374 aa23.01■■□□□ 1.27
CDKN2A-209ENST00000498628 PER1O15534 1290 aaPredicted RBP23■■□□□ 1.27
CDKN2A-209ENST00000498628 IL13P35225 146 aa23■■□□□ 1.27
CDKN2A-209ENST00000498628 MTHFSP49914 203 aa23■■□□□ 1.27
CDKN2A-209ENST00000498628 KLHL34Q8N239 644 aa23■■□□□ 1.27
CDKN2A-209ENST00000498628 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
CDKN2A-209ENST00000498628 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
CDKN2A-209ENST00000498628 ATP6V1AP38606 617 aa22.98■■□□□ 1.27
CDKN2A-209ENST00000498628 CABP4P57796 275 aa22.98■■□□□ 1.27
CDKN2A-209ENST00000498628 ASAP1Q9ULH1 1129 aa22.98■■□□□ 1.27
CDKN2A-209ENST00000498628 C5P01031 1676 aa22.97■■□□□ 1.27
CDKN2A-209ENST00000498628 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
CDKN2A-209ENST00000498628 ATG3Q9NT62 314 aa22.97■■□□□ 1.27
CDKN2A-209ENST00000498628 DIAPH1O60610 1272 aaKnown RBP22.95■■□□□ 1.26
CDKN2A-209ENST00000498628 NPC1L1Q9UHC9 1359 aa22.95■■□□□ 1.26
CDKN2A-209ENST00000498628 KDRP35968 1356 aa22.94■■□□□ 1.26
CDKN2A-209ENST00000498628 SSFA2P28290 1259 aa22.94■■□□□ 1.26
CDKN2A-209ENST00000498628 TUBGCP6Q96RT7 1819 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms