RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
RNF8-208ENST00000498460 RAPGEF4Q8WZA2 1011 aa13.72□□□□□ -0.21
RNF8-208ENST00000498460 CARD14Q9BXL6 1004 aa13.72□□□□□ -0.21
RNF8-208ENST00000498460 LY75O60449 1722 aa13.72□□□□□ -0.21
RNF8-208ENST00000498460 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
RNF8-208ENST00000498460 MEGF6O75095 1541 aa13.71□□□□□ -0.21
RNF8-208ENST00000498460 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
RNF8-208ENST00000498460 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.21
RNF8-208ENST00000498460 PAPPAQ13219 1627 aa13.71□□□□□ -0.22
RNF8-208ENST00000498460 INSRP06213 1382 aa13.71□□□□□ -0.22
RNF8-208ENST00000498460 FLT4P35916 1363 aa13.71□□□□□ -0.22
RNF8-208ENST00000498460 QSER1Q2KHR3 1735 aa13.7□□□□□ -0.22
RNF8-208ENST00000498460 CGNL1Q0VF96 1302 aa13.7□□□□□ -0.22
RNF8-208ENST00000498460 ITGB4P16144 1822 aa13.7□□□□□ -0.22
RNF8-208ENST00000498460 TUBGCP6Q96RT7 1819 aa13.7□□□□□ -0.22
RNF8-208ENST00000498460 PPM1GO15355 546 aaPredicted RBP13.7□□□□□ -0.22
RNF8-208ENST00000498460 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
RNF8-208ENST00000498460 KIF24Q5T7B8 1368 aa13.7□□□□□ -0.22
RNF8-208ENST00000498460 UTRNP46939 3433 aa13.7□□□□□ -0.22
RNF8-208ENST00000498460 TATP17735 454 aaPredicted RBP13.69□□□□□ -0.22
RNF8-208ENST00000498460 SLC27A3Q5K4L6 730 aa13.69□□□□□ -0.22
RNF8-208ENST00000498460 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
RNF8-208ENST00000498460 MTFR1LQ9H019 292 aa13.69□□□□□ -0.22
RNF8-208ENST00000498460 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
RNF8-208ENST00000498460 PTGER2P43116 358 aa13.68□□□□□ -0.22
RNF8-208ENST00000498460 EMILIN1Q9Y6C2 1016 aa13.68□□□□□ -0.22
RNF8-208ENST00000498460 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
RNF8-208ENST00000498460 ZNF827Q17R98 1081 aa13.67□□□□□ -0.22
RNF8-208ENST00000498460 CHD4Q14839 1912 aa13.66□□□□□ -0.22
RNF8-208ENST00000498460 KCNQ4P56696 695 aa13.66□□□□□ -0.22
RNF8-208ENST00000498460 GOLGB1Q14789 3259 aaKnown RBP13.66□□□□□ -0.22
RNF8-208ENST00000498460 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
RNF8-208ENST00000498460 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
RNF8-208ENST00000498460 PKD1L3Q7Z443 1732 aa13.65□□□□□ -0.22
RNF8-208ENST00000498460 TAF1LQ8IZX4 1826 aa13.65□□□□□ -0.22
RNF8-208ENST00000498460 TFCP2L1Q9NZI6 479 aa13.65□□□□□ -0.22
RNF8-208ENST00000498460 NSD2O96028 1365 aa13.64□□□□□ -0.23
RNF8-208ENST00000498460 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
RNF8-208ENST00000498460 YY1P25490 414 aa13.64□□□□□ -0.23
RNF8-208ENST00000498460 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
RNF8-208ENST00000498460 FHDC1Q9C0D6 1143 aaPredicted RBP13.64□□□□□ -0.23
RNF8-208ENST00000498460 CCNL1Q9UK58 526 aaPredicted RBP13.64□□□□□ -0.23
RNF8-208ENST00000498460 C5P01031 1676 aa13.63□□□□□ -0.23
RNF8-208ENST00000498460 TNNT2P45379 298 aaPredicted RBP13.63□□□□□ -0.23
RNF8-208ENST00000498460 ARXQ96QS3 562 aa13.63□□□□□ -0.23
RNF8-208ENST00000498460 SYT17Q9BSW7 474 aa13.63□□□□□ -0.23
RNF8-208ENST00000498460 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
RNF8-208ENST00000498460 TOGARAM1Q9Y4F4 1720 aa13.62□□□□□ -0.23
RNF8-208ENST00000498460 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
RNF8-208ENST00000498460 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
RNF8-208ENST00000498460 SGIP1Q9BQI5 828 aa13.62□□□□□ -0.23
RNF8-208ENST00000498460 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
RNF8-208ENST00000498460 CYP27B1O15528 508 aa13.61□□□□□ -0.23
RNF8-208ENST00000498460 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
RNF8-208ENST00000498460 SPG7Q9UQ90 795 aa13.61□□□□□ -0.23
RNF8-208ENST00000498460 PNPLA7Q6ZV29 1317 aa13.61□□□□□ -0.23
RNF8-208ENST00000498460 MSH5O43196 834 aa13.6□□□□□ -0.23
RNF8-208ENST00000498460 POLD1P28340 1107 aa13.6□□□□□ -0.23
RNF8-208ENST00000498460 EYA1Q99502 592 aa13.6□□□□□ -0.23
RNF8-208ENST00000498460 PANK3Q9H999 370 aa13.6□□□□□ -0.23
RNF8-208ENST00000498460 HMGB2P26583 209 aaKnown RBP13.59□□□□□ -0.23
RNF8-208ENST00000498460 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
RNF8-208ENST00000498460 NCAPD2Q15021 1401 aa13.58□□□□□ -0.24
RNF8-208ENST00000498460 PALLDQ8WX93 1383 aa13.58□□□□□ -0.24
RNF8-208ENST00000498460 EIF4A2Q14240 407 aaKnown RBP13.57□□□□□ -0.24
RNF8-208ENST00000498460 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
RNF8-208ENST00000498460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.249e-7■■■□□ 14.8
RNF8-208ENST00000498460 UBR3Q6ZT12 1888 aa13.56□□□□□ -0.24
RNF8-208ENST00000498460 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
RNF8-208ENST00000498460 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
RNF8-208ENST00000498460 MORC1Q86VD1 984 aa13.55□□□□□ -0.24
RNF8-208ENST00000498460 COL23A1Q86Y22 540 aaPredicted RBP13.55□□□□□ -0.24
RNF8-208ENST00000498460 IFNL2Q8IZJ0 200 aa13.55□□□□□ -0.24
RNF8-208ENST00000498460 PIGBQ92521 554 aa13.55□□□□□ -0.24
RNF8-208ENST00000498460 KNSTRNQ9Y448 316 aa13.55□□□□□ -0.24
RNF8-208ENST00000498460 MAP3K5Q99683 1374 aa13.55□□□□□ -0.24
RNF8-208ENST00000498460 FLAD1Q8NFF5 587 aa13.54□□□□□ -0.24
RNF8-208ENST00000498460 TMOD3Q9NYL9 352 aa13.54□□□□□ -0.24
RNF8-208ENST00000498460 PHKG2P15735 406 aa13.53□□□□□ -0.24
RNF8-208ENST00000498460 GPR162Q16538 588 aa13.53□□□□□ -0.24
RNF8-208ENST00000498460 AK7Q96M32 723 aa13.53□□□□□ -0.24
RNF8-208ENST00000498460 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
RNF8-208ENST00000498460 MSL1Q68DK7 614 aa13.52□□□□□ -0.25
RNF8-208ENST00000498460 PELP1Q8IZL8 1130 aaKnown RBP13.52□□□□□ -0.25
RNF8-208ENST00000498460 IGSF1Q8N6C5 1336 aa13.51□□□□□ -0.25
RNF8-208ENST00000498460 LOC102724428A0A0B4J2F2 783 aa13.5□□□□□ -0.25
RNF8-208ENST00000498460 PHF14O94880 888 aa13.5□□□□□ -0.25
RNF8-208ENST00000498460 ADRA2BP18089 450 aa13.5□□□□□ -0.25
RNF8-208ENST00000498460 SIK1P57059 783 aa13.5□□□□□ -0.25
RNF8-208ENST00000498460 PLEKHO1Q53GL0 409 aaPredicted RBP13.5□□□□□ -0.25
RNF8-208ENST00000498460 ASAP1Q9ULH1 1129 aa13.5□□□□□ -0.25
RNF8-208ENST00000498460 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
RNF8-208ENST00000498460 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
RNF8-208ENST00000498460 ATP6V1AP38606 617 aa13.49□□□□□ -0.25
RNF8-208ENST00000498460 NLGN2Q8NFZ4 835 aa13.49□□□□□ -0.25
RNF8-208ENST00000498460 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
RNF8-208ENST00000498460 AMOTQ4VCS5 1084 aa13.48□□□□□ -0.25
RNF8-208ENST00000498460 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
RNF8-208ENST00000498460 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
RNF8-208ENST00000498460 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms