RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.58■■□□□ 1.05
TNRC18-210ENST00000497663 TMEM106CQ9BVX2 250 aa21.58■■□□□ 1.05
TNRC18-210ENST00000497663 STK24Q9Y6E0 443 aa21.58■■□□□ 1.05
TNRC18-210ENST00000497663 NFAT5O94916 1531 aa21.58■■□□□ 1.04
TNRC18-210ENST00000497663 LRP5O75197 1615 aa21.58■■□□□ 1.04
TNRC18-210ENST00000497663 PARP4Q9UKK3 1724 aaKnown RBP21.58■■□□□ 1.04
TNRC18-210ENST00000497663 NME9Q86XW9 330 aa21.57■■□□□ 1.04
TNRC18-210ENST00000497663 SLC12A5Q9H2X9 1139 aa21.57■■□□□ 1.04
TNRC18-210ENST00000497663 LRRC37A3O60309 1634 aa21.56■■□□□ 1.04
TNRC18-210ENST00000497663 PEAK1Q9H792 1746 aa21.56■■□□□ 1.04
TNRC18-210ENST00000497663 RGPD5Q99666 1765 aa21.56■■□□□ 1.04
TNRC18-210ENST00000497663 WDR17Q8IZU2 1322 aa21.55■■□□□ 1.04
TNRC18-210ENST00000497663 MARCH10Q8NA82 808 aaPredicted RBP21.55■■□□□ 1.04
TNRC18-210ENST00000497663 SBNO2Q9Y2G9 1366 aa21.55■■□□□ 1.04
TNRC18-210ENST00000497663 TTC21AQ8NDW8 1320 aa21.54■■□□□ 1.04
TNRC18-210ENST00000497663 TMC1Q8TDI8 760 aa21.53■■□□□ 1.04
TNRC18-210ENST00000497663 MON2Q7Z3U7 1717 aa21.52■■□□□ 1.04
TNRC18-210ENST00000497663 BMP2KQ9NSY1 1161 aaPredicted RBP21.52■■□□□ 1.04
TNRC18-210ENST00000497663 RREB1Q92766 1687 aa21.52■■□□□ 1.04
TNRC18-210ENST00000497663 NUP188Q5SRE5 1749 aa21.52■■□□□ 1.03
TNRC18-210ENST00000497663 TONSLQ96HA7 1378 aa21.51■■□□□ 1.03
TNRC18-210ENST00000497663 DDB1Q16531 1140 aa21.51■■□□□ 1.03
TNRC18-210ENST00000497663 KCNH5Q8NCM2 988 aa21.51■■□□□ 1.03
TNRC18-210ENST00000497663 DCBLD2Q96PD2 775 aa21.51■■□□□ 1.03
TNRC18-210ENST00000497663 TTLL13PA6NNM8 815 aa21.5■■□□□ 1.03
TNRC18-210ENST00000497663 USP31Q70CQ4 1352 aa21.49■■□□□ 1.03
TNRC18-210ENST00000497663 OVOS2A0A0G2JMS6 1433 aa21.49■■□□□ 1.03
TNRC18-210ENST00000497663 OVOS2A0A0J9YW53 1432 aa21.49■■□□□ 1.03
TNRC18-210ENST00000497663 OVOS2Q6IE36 1432 aa21.49■■□□□ 1.03
TNRC18-210ENST00000497663 CSB-PGBD3P0DP91 1061 aa21.49■■□□□ 1.03
TNRC18-210ENST00000497663 TESK2Q96S53 571 aa21.49■■□□□ 1.03
TNRC18-210ENST00000497663 CARD10Q9BWT7 1032 aa21.49■■□□□ 1.03
TNRC18-210ENST00000497663 WNK3Q9BYP7 1800 aa21.48■■□□□ 1.03
TNRC18-210ENST00000497663 A0A1W2PP64 1363 aa21.48■■□□□ 1.03
TNRC18-210ENST00000497663 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
TNRC18-210ENST00000497663 ST20-MTHFSA0A0A6YYL1 179 aa21.46■■□□□ 1.03
TNRC18-210ENST00000497663 FBLN1P23142 703 aa21.46■■□□□ 1.03
TNRC18-210ENST00000497663 ANO8Q9HCE9 1232 aaPredicted RBP21.46■■□□□ 1.03
TNRC18-210ENST00000497663 SBF2Q86WG5 1849 aa21.45■■□□□ 1.03
TNRC18-210ENST00000497663 PDGFDQ9GZP0 370 aaPredicted RBP21.45■■□□□ 1.02
TNRC18-210ENST00000497663 GOLGA2Q08379 1002 aa21.44■■□□□ 1.02
TNRC18-210ENST00000497663 BBXQ8WY36 941 aaPredicted RBP21.44■■□□□ 1.02
TNRC18-210ENST00000497663 KCNQ2O43526 872 aa21.43■■□□□ 1.02
TNRC18-210ENST00000497663 ERBB3P21860 1342 aa21.42■■□□□ 1.02
TNRC18-210ENST00000497663 USP54Q70EL1 1684 aa21.42■■□□□ 1.02
TNRC18-210ENST00000497663 ATMINO43313 823 aaPredicted RBP21.41■■□□□ 1.02
TNRC18-210ENST00000497663 ASTLQ6HA08 431 aaPredicted RBP21.41■■□□□ 1.02
TNRC18-210ENST00000497663 HDGFL2Q7Z4V5 671 aaPredicted RBP21.41■■□□□ 1.02
TNRC18-210ENST00000497663 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
TNRC18-210ENST00000497663 NLRP2Q9NX02 1062 aa21.4■■□□□ 1.02
TNRC18-210ENST00000497663 PLSCR1O15162 318 aa21.39■■□□□ 1.01
TNRC18-210ENST00000497663 ANKRD24Q8TF21 1146 aa21.39■■□□□ 1.01
TNRC18-210ENST00000497663 CDCA7Q9BWT1 371 aaPredicted RBP21.39■■□□□ 1.01
TNRC18-210ENST00000497663 BCL9O00512 1426 aa21.38■■□□□ 1.01
TNRC18-210ENST00000497663 EXOC5O00471 708 aa21.38■■□□□ 1.01
TNRC18-210ENST00000497663 NBPF14Q5TI25 921 aa21.38■■□□□ 1.01
TNRC18-210ENST00000497663 ACSBG1Q96GR2 724 aa21.38■■□□□ 1.01
TNRC18-210ENST00000497663 TRIM35Q9UPQ4 493 aa21.38■■□□□ 1.01
TNRC18-210ENST00000497663 LTN1O94822 1766 aa21.38■■□□□ 1.01
TNRC18-210ENST00000497663 CCDC7Q96M83 1385 aa21.37■■□□□ 1.01
TNRC18-210ENST00000497663 ATN1P54259 1190 aaPredicted RBP21.37■■□□□ 1.01
TNRC18-210ENST00000497663 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.37■■□□□ 1.01
TNRC18-210ENST00000497663 ABCC6O95255 1503 aa21.37■■□□□ 1.01
TNRC18-210ENST00000497663 TNS2Q63HR2 1409 aa21.37■■□□□ 1.01
TNRC18-210ENST00000497663 TRIM26Q12899 539 aaPredicted RBP21.36■■□□□ 1.01
TNRC18-210ENST00000497663 LTV1Q96GA3 475 aaPredicted RBP21.36■■□□□ 1.01
TNRC18-210ENST00000497663 TERF2IPQ9NYB0 399 aa21.36■■□□□ 1.01
TNRC18-210ENST00000497663 PUS7Q96PZ0 661 aaKnown RBP21.35■■□□□ 1.01
TNRC18-210ENST00000497663 C11orf95C9JLR9 678 aaPredicted RBP21.33■■□□□ 1.01
TNRC18-210ENST00000497663 MKRN3Q13064 507 aaKnown RBP21.33■■□□□ 1.01
TNRC18-210ENST00000497663 TXNRD1Q16881 649 aa21.33■■□□□ 1.01
TNRC18-210ENST00000497663 MAP3K19Q56UN5 1328 aa21.32■■□□□ 1
TNRC18-210ENST00000497663 IL2RBP14784 551 aa21.32■■□□□ 1
TNRC18-210ENST00000497663 IP6K1Q92551 441 aa21.32■■□□□ 1
TNRC18-210ENST00000497663 RGPD3A6NKT7 1758 aaPredicted RBP21.32■■□□□ 1
TNRC18-210ENST00000497663 RGPD4Q7Z3J3 1758 aa21.32■■□□□ 1
TNRC18-210ENST00000497663 EFCAB3Q8N7B9 438 aa21.31■■□□□ 1
TNRC18-210ENST00000497663 USP47Q96K76 1375 aa21.3■■□□□ 1
TNRC18-210ENST00000497663 CASZ1Q86V15 1759 aa21.29■■□□□ 1
TNRC18-210ENST00000497663 ZBTB7AO95365 584 aa21.29■■□□□ 1
TNRC18-210ENST00000497663 HOXC9P31274 260 aa21.28■■□□□ 1
TNRC18-210ENST00000497663 RRS1Q15050 365 aaKnown RBP21.28■■□□□ 1
TNRC18-210ENST00000497663 GGNBP2Q9H3C7 697 aa21.28■■□□□ 1
TNRC18-210ENST00000497663 SPON1Q9HCB6 807 aa21.28■■□□□ 1
TNRC18-210ENST00000497663 FYB1O15117 783 aa21.27■■□□□ 1
TNRC18-210ENST00000497663 NHSQ6T4R5 1651 aa21.27■■□□□ 1
TNRC18-210ENST00000497663 ANKRD36BQ8N2N9 1353 aa21.26■□□□□ 0.99
TNRC18-210ENST00000497663 COG3Q96JB2 828 aa21.26■□□□□ 0.99
TNRC18-210ENST00000497663 NINLQ9Y2I6 1382 aa21.25■□□□□ 0.99
TNRC18-210ENST00000497663 NKX1-1Q15270 411 aaPredicted RBP21.25■□□□□ 0.99
TNRC18-210ENST00000497663 DDX54Q8TDD1 881 aaKnown RBP21.25■□□□□ 0.99
TNRC18-210ENST00000497663 PTGER2P43116 358 aa21.24■□□□□ 0.99
TNRC18-210ENST00000497663 SLC15A2Q16348 729 aa21.24■□□□□ 0.99
TNRC18-210ENST00000497663 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
TNRC18-210ENST00000497663 RGPD2P0DJD1 1756 aa21.23■□□□□ 0.99
TNRC18-210ENST00000497663 POTEIP0CG38 1075 aa21.23■□□□□ 0.99
TNRC18-210ENST00000497663 ZNF827Q17R98 1081 aa21.23■□□□□ 0.99
TNRC18-210ENST00000497663 USHBP1Q8N6Y0 703 aa21.23■□□□□ 0.99
TNRC18-210ENST00000497663 CARD14Q9BXL6 1004 aa21.23■□□□□ 0.99
TNRC18-210ENST00000497663 FAM208AQ9UK61 1670 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms