RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 ZCRB1Q8TBF4 217 aaKnown RBP17.97■□□□□ 0.47
FN1-226ENST00000496542 NBPF4Q96M43 638 aa17.97■□□□□ 0.47
FN1-226ENST00000496542 PAPPAQ13219 1627 aa17.97■□□□□ 0.47
FN1-226ENST00000496542 INSRP06213 1382 aa17.96■□□□□ 0.47
FN1-226ENST00000496542 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
FN1-226ENST00000496542 SYTL4Q96C24 671 aaPredicted RBP17.96■□□□□ 0.47
FN1-226ENST00000496542 RAPGEF4Q8WZA2 1011 aa17.94■□□□□ 0.46
FN1-226ENST00000496542 EMILIN1Q9Y6C2 1016 aa17.94■□□□□ 0.46
FN1-226ENST00000496542 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
FN1-226ENST00000496542 PRIM1P49642 420 aaKnown RBP17.93■□□□□ 0.46
FN1-226ENST00000496542 ATF5Q9Y2D1 282 aaPredicted RBP17.93■□□□□ 0.46
FN1-226ENST00000496542 CGNL1Q0VF96 1302 aa17.93■□□□□ 0.46
FN1-226ENST00000496542 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
FN1-226ENST00000496542 TATP17735 454 aaPredicted RBP17.92■□□□□ 0.46
FN1-226ENST00000496542 EIF4G2P78344 907 aaKnown RBP eCLIP17.92■□□□□ 0.46
FN1-226ENST00000496542 LRRC4BQ9NT99 713 aa17.92■□□□□ 0.46
FN1-226ENST00000496542 MAP2P11137 1827 aaKnown RBP17.91■□□□□ 0.46
FN1-226ENST00000496542 HSPA5P11021 654 aaKnown RBP17.91■□□□□ 0.46
FN1-226ENST00000496542 ZNF827Q17R98 1081 aa17.91■□□□□ 0.46
FN1-226ENST00000496542 ANKRD26Q9UPS8 1709 aa17.91■□□□□ 0.46
FN1-226ENST00000496542 NSD2O96028 1365 aa17.91■□□□□ 0.46
FN1-226ENST00000496542 PTGER2P43116 358 aa17.89■□□□□ 0.45
FN1-226ENST00000496542 SLC27A3Q5K4L6 730 aa17.89■□□□□ 0.45
FN1-226ENST00000496542 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
FN1-226ENST00000496542 KCNQ4P56696 695 aa17.88■□□□□ 0.45
FN1-226ENST00000496542 LY75O60449 1722 aa17.88■□□□□ 0.45
FN1-226ENST00000496542 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
FN1-226ENST00000496542 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
FN1-226ENST00000496542 TUBGCP6Q96RT7 1819 aa17.86■□□□□ 0.45
FN1-226ENST00000496542 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
FN1-226ENST00000496542 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
FN1-226ENST00000496542 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
FN1-226ENST00000496542 PKD1L3Q7Z443 1732 aa17.86■□□□□ 0.45
FN1-226ENST00000496542 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
FN1-226ENST00000496542 WASHC2AQ641Q2 1341 aa17.85■□□□□ 0.45
FN1-226ENST00000496542 NCAPD2Q15021 1401 aa17.84■□□□□ 0.45
FN1-226ENST00000496542 POLKQ9UBT6 870 aa17.84■□□□□ 0.45
FN1-226ENST00000496542 CCNL1Q9UK58 526 aaPredicted RBP17.84■□□□□ 0.45
FN1-226ENST00000496542 TOGARAM1Q9Y4F4 1720 aa17.84■□□□□ 0.45
FN1-226ENST00000496542 CYP27B1O15528 508 aa17.83■□□□□ 0.44
FN1-226ENST00000496542 SGIP1Q9BQI5 828 aa17.83■□□□□ 0.44
FN1-226ENST00000496542 PANK3Q9H999 370 aa17.83■□□□□ 0.44
FN1-226ENST00000496542 TFCP2L1Q9NZI6 479 aa17.83■□□□□ 0.44
FN1-226ENST00000496542 EYA1Q99502 592 aa17.82■□□□□ 0.44
FN1-226ENST00000496542 FHDC1Q9C0D6 1143 aaPredicted RBP17.82■□□□□ 0.44
FN1-226ENST00000496542 ITGB4P16144 1822 aa17.82■□□□□ 0.44
FN1-226ENST00000496542 PNPLA7Q6ZV29 1317 aa17.81■□□□□ 0.44
FN1-226ENST00000496542 MPRIPQ6WCQ1 1025 aa17.8■□□□□ 0.44
FN1-226ENST00000496542 ARXQ96QS3 562 aa17.8■□□□□ 0.44
FN1-226ENST00000496542 PALLDQ8WX93 1383 aa17.79■□□□□ 0.44
FN1-226ENST00000496542 YY1P25490 414 aa17.79■□□□□ 0.44
FN1-226ENST00000496542 EIF4A2Q14240 407 aaKnown RBP17.79■□□□□ 0.44
FN1-226ENST00000496542 SYT17Q9BSW7 474 aa17.79■□□□□ 0.44
FN1-226ENST00000496542 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
FN1-226ENST00000496542 C5P01031 1676 aa17.79■□□□□ 0.44
FN1-226ENST00000496542 SLC16A10Q8TF71 515 aa17.78■□□□□ 0.44
FN1-226ENST00000496542 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.43
FN1-226ENST00000496542 MSH5O43196 834 aa17.76■□□□□ 0.43
FN1-226ENST00000496542 POLD1P28340 1107 aa17.76■□□□□ 0.43
FN1-226ENST00000496542 COL24A1Q17RW2 1714 aa17.75■□□□□ 0.43
FN1-226ENST00000496542 MORC1Q86VD1 984 aa17.75■□□□□ 0.43
FN1-226ENST00000496542 KLHL34Q8N239 644 aa17.75■□□□□ 0.43
FN1-226ENST00000496542 NKX1-1Q15270 411 aaPredicted RBP17.74■□□□□ 0.43
FN1-226ENST00000496542 PIGBQ92521 554 aa17.74■□□□□ 0.43
FN1-226ENST00000496542 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
FN1-226ENST00000496542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.74■□□□□ 0.43
FN1-226ENST00000496542 MAP3K5Q99683 1374 aa17.74■□□□□ 0.43
FN1-226ENST00000496542 UTRNP46939 3433 aa17.73■□□□□ 0.43
FN1-226ENST00000496542 KNSTRNQ9Y448 316 aa17.73■□□□□ 0.43
FN1-226ENST00000496542 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
FN1-226ENST00000496542 PHKG2P15735 406 aa17.72■□□□□ 0.43
FN1-226ENST00000496542 COL23A1Q86Y22 540 aaPredicted RBP17.72■□□□□ 0.43
FN1-226ENST00000496542 IFNL2Q8IZJ0 200 aa17.72■□□□□ 0.43
FN1-226ENST00000496542 TMOD3Q9NYL9 352 aa17.72■□□□□ 0.43
FN1-226ENST00000496542 C4BP0C0L5 1744 aa17.72■□□□□ 0.43
FN1-226ENST00000496542 KIF7Q2M1P5 1343 aa17.71■□□□□ 0.42
FN1-226ENST00000496542 HMGB2P26583 209 aaKnown RBP17.7■□□□□ 0.42
FN1-226ENST00000496542 MSL1Q68DK7 614 aa17.7■□□□□ 0.42
FN1-226ENST00000496542 PLEKHG2Q9H7P9 1386 aa17.69■□□□□ 0.42
FN1-226ENST00000496542 AK7Q96M32 723 aa17.69■□□□□ 0.42
FN1-226ENST00000496542 CHD4Q14839 1912 aa17.68■□□□□ 0.42
FN1-226ENST00000496542 UBR3Q6ZT12 1888 aa17.68■□□□□ 0.42
FN1-226ENST00000496542 ASAP1Q9ULH1 1129 aa17.68■□□□□ 0.42
FN1-226ENST00000496542 LOC102724428A0A0B4J2F2 783 aa17.67■□□□□ 0.42
FN1-226ENST00000496542 SIK1P57059 783 aa17.67■□□□□ 0.42
FN1-226ENST00000496542 AEBP1Q8IUX7 1158 aa17.67■□□□□ 0.42
FN1-226ENST00000496542 FLAD1Q8NFF5 587 aa17.67■□□□□ 0.42
FN1-226ENST00000496542 PHF14O94880 888 aa17.66■□□□□ 0.42
FN1-226ENST00000496542 GPR162Q16538 588 aa17.66■□□□□ 0.42
FN1-226ENST00000496542 PLEKHO1Q53GL0 409 aaPredicted RBP17.66■□□□□ 0.42
FN1-226ENST00000496542 AMER1Q5JTC6 1135 aaPredicted RBP17.66■□□□□ 0.42
FN1-226ENST00000496542 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
FN1-226ENST00000496542 AMIGO3Q86WK7 504 aa17.65■□□□□ 0.42
FN1-226ENST00000496542 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
FN1-226ENST00000496542 LINC00116Q8NCU8 138 aa17.65■□□□□ 0.42
FN1-226ENST00000496542 NLGN2Q8NFZ4 835 aa17.65■□□□□ 0.42
FN1-226ENST00000496542 GOLGB1Q14789 3259 aaKnown RBP17.64■□□□□ 0.42
FN1-226ENST00000496542 HSP90AB1P08238 724 aaKnown RBP17.64■□□□□ 0.41
FN1-226ENST00000496542 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
FN1-226ENST00000496542 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms