RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
CHCHD3-206ENST00000496427 CAMKK2Q96RR4 588 aa10.23□□□□□ -0.77
CHCHD3-206ENST00000496427 POTEB3A0JP26 581 aa10.22□□□□□ -0.77
CHCHD3-206ENST00000496427 APBA3O96018 575 aa10.22□□□□□ -0.77
CHCHD3-206ENST00000496427 DOK7Q18PE1 504 aa10.22□□□□□ -0.77
CHCHD3-206ENST00000496427 POTEBQ6S5H4 581 aa10.22□□□□□ -0.77
CHCHD3-206ENST00000496427 ZNF710Q8N1W2 664 aa10.22□□□□□ -0.77
CHCHD3-206ENST00000496427 MYOM1P52179 1685 aa10.22□□□□□ -0.77
CHCHD3-206ENST00000496427 COL18A1P39060 1754 aa10.21□□□□□ -0.77
CHCHD3-206ENST00000496427 HOXB1P14653 301 aaPredicted RBP10.21□□□□□ -0.77
CHCHD3-206ENST00000496427 DCAF11Q8TEB1 546 aa10.21□□□□□ -0.77
CHCHD3-206ENST00000496427 NUDT16Q96DE0 195 aaKnown RBP10.21□□□□□ -0.77
CHCHD3-206ENST00000496427 PIK3C2AO00443 1686 aa10.21□□□□□ -0.78
CHCHD3-206ENST00000496427 HOXB3P14651 431 aaPredicted RBP10.2□□□□□ -0.78
CHCHD3-206ENST00000496427 FAM196AQ6ZSG2 479 aa10.2□□□□□ -0.78
CHCHD3-206ENST00000496427 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
CHCHD3-206ENST00000496427 COL5A2P05997 1499 aaPredicted RBP10.19□□□□□ -0.78
CHCHD3-206ENST00000496427 ACEP12821 1306 aa10.19□□□□□ -0.78
CHCHD3-206ENST00000496427 RIMBP2O15034 1052 aa10.19□□□□□ -0.78
CHCHD3-206ENST00000496427 LARP1Q6PKG0 1096 aaKnown RBP10.19□□□□□ -0.78
CHCHD3-206ENST00000496427 POLR3AO14802 1390 aaPredicted RBP10.18□□□□□ -0.78
CHCHD3-206ENST00000496427 PARD3Q8TEW0 1356 aa10.18□□□□□ -0.78
CHCHD3-206ENST00000496427 CHD4Q14839 1912 aa10.18□□□□□ -0.78
CHCHD3-206ENST00000496427 SLC24A1O60721 1099 aa10.18□□□□□ -0.78
CHCHD3-206ENST00000496427 ZBTB7CA1YPR0 619 aa10.17□□□□□ -0.78
CHCHD3-206ENST00000496427 EVA1CP58658 441 aa10.17□□□□□ -0.78
CHCHD3-206ENST00000496427 PDE3BQ13370 1112 aa10.17□□□□□ -0.78
CHCHD3-206ENST00000496427 CDK19Q9BWU1 502 aa10.17□□□□□ -0.78
CHCHD3-206ENST00000496427 KAT6BQ8WYB5 2073 aa10.16□□□□□ -0.78
CHCHD3-206ENST00000496427 USP19O94966 1318 aa10.16□□□□□ -0.78
CHCHD3-206ENST00000496427 YY1P25490 414 aa10.16□□□□□ -0.78
CHCHD3-206ENST00000496427 BARGINQ6ZT62 677 aa10.16□□□□□ -0.78
CHCHD3-206ENST00000496427 SLIT3O75094 1523 aa10.16□□□□□ -0.78
CHCHD3-206ENST00000496427 PPIP5K1Q6PFW1 1433 aa10.16□□□□□ -0.78
CHCHD3-206ENST00000496427 CPDO75976 1380 aa10.15□□□□□ -0.78
CHCHD3-206ENST00000496427 NBPF8Q3BBV2 869 aa10.15□□□□□ -0.78
CHCHD3-206ENST00000496427 TCP11L2Q8N4U5 519 aa10.15□□□□□ -0.78
CHCHD3-206ENST00000496427 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
CHCHD3-206ENST00000496427 LTN1O94822 1766 aa10.15□□□□□ -0.78
CHCHD3-206ENST00000496427 OVOS2A0A0G2JMS6 1433 aa10.15□□□□□ -0.79
CHCHD3-206ENST00000496427 OVOS2A0A0J9YW53 1432 aa10.15□□□□□ -0.79
CHCHD3-206ENST00000496427 OVOS2Q6IE36 1432 aa10.15□□□□□ -0.79
CHCHD3-206ENST00000496427 ERBB3P21860 1342 aa10.14□□□□□ -0.79
CHCHD3-206ENST00000496427 NBPF14Q5TI25 921 aa10.14□□□□□ -0.79
CHCHD3-206ENST00000496427 ANO8Q9HCE9 1232 aaPredicted RBP10.14□□□□□ -0.79
CHCHD3-206ENST00000496427 PPP1R1BQ9UD71 204 aaPredicted RBP10.14□□□□□ -0.79
CHCHD3-206ENST00000496427 CRB1P82279 1406 aa10.14□□□□□ -0.79
CHCHD3-206ENST00000496427 TUBGCP6Q96RT7 1819 aa10.14□□□□□ -0.79
CHCHD3-206ENST00000496427 NHSQ6T4R5 1651 aa10.13□□□□□ -0.79
CHCHD3-206ENST00000496427 BTAF1O14981 1849 aa10.13□□□□□ -0.79
CHCHD3-206ENST00000496427 PTF1AQ7RTS3 328 aa10.13□□□□□ -0.79
CHCHD3-206ENST00000496427 ZSWIM6Q9HCJ5 1215 aa10.13□□□□□ -0.79
CHCHD3-206ENST00000496427 MON2Q7Z3U7 1717 aa10.13□□□□□ -0.79
CHCHD3-206ENST00000496427 TRPM1Q7Z4N2 1603 aa10.12□□□□□ -0.79
CHCHD3-206ENST00000496427 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
CHCHD3-206ENST00000496427 KCNQ2O43526 872 aa10.12□□□□□ -0.79
CHCHD3-206ENST00000496427 PDGFDQ9GZP0 370 aaPredicted RBP10.12□□□□□ -0.79
CHCHD3-206ENST00000496427 SPON1Q9HCB6 807 aa10.12□□□□□ -0.79
CHCHD3-206ENST00000496427 NINLQ9Y2I6 1382 aa10.12□□□□□ -0.79
CHCHD3-206ENST00000496427 USP6P35125 1406 aa10.11□□□□□ -0.79
CHCHD3-206ENST00000496427 GCP02774 474 aa10.11□□□□□ -0.79
CHCHD3-206ENST00000496427 NBPF1Q3BBV0 1214 aa10.11□□□□□ -0.79
CHCHD3-206ENST00000496427 EFCAB3Q8N7B9 438 aa10.11□□□□□ -0.79
CHCHD3-206ENST00000496427 THRAP3Q9Y2W1 955 aaKnown RBP10.11□□□□□ -0.79
CHCHD3-206ENST00000496427 SRPK2P78362 688 aaKnown RBP10.1□□□□□ -0.79
CHCHD3-206ENST00000496427 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
CHCHD3-206ENST00000496427 PAPPAQ13219 1627 aa10.1□□□□□ -0.79
CHCHD3-206ENST00000496427 CPSF1Q10570 1443 aaKnown RBP10.09□□□□□ -0.79
CHCHD3-206ENST00000496427 USP54Q70EL1 1684 aa10.09□□□□□ -0.79
CHCHD3-206ENST00000496427 RGPD2P0DJD1 1756 aa10.09□□□□□ -0.79
CHCHD3-206ENST00000496427 UTRNP46939 3433 aa10.08□□□□□ -0.8
CHCHD3-206ENST00000496427 NFAT5O94916 1531 aa10.08□□□□□ -0.8
CHCHD3-206ENST00000496427 QSER1Q2KHR3 1735 aa10.08□□□□□ -0.8
CHCHD3-206ENST00000496427 SOX12O15370 315 aa10.08□□□□□ -0.8
CHCHD3-206ENST00000496427 ZBTB7AO95365 584 aa10.08□□□□□ -0.8
CHCHD3-206ENST00000496427 DDB1Q16531 1140 aa10.08□□□□□ -0.8
CHCHD3-206ENST00000496427 TOM1L2Q6ZVM7 507 aa10.08□□□□□ -0.8
CHCHD3-206ENST00000496427 AATKQ6ZMQ8 1374 aa10.08□□□□□ -0.8
CHCHD3-206ENST00000496427 CENPJQ9HC77 1338 aaPredicted RBP10.07□□□□□ -0.8
CHCHD3-206ENST00000496427 NLRP6P59044 892 aa10.07□□□□□ -0.8
CHCHD3-206ENST00000496427 MARCH10Q8NA82 808 aaPredicted RBP10.07□□□□□ -0.8
CHCHD3-206ENST00000496427 STAC3Q96MF2 364 aa10.07□□□□□ -0.8
CHCHD3-206ENST00000496427 AXIN2Q9Y2T1 843 aa10.07□□□□□ -0.8
CHCHD3-206ENST00000496427 MICALL2Q8IY33 904 aa10.06□□□□□ -0.8
CHCHD3-206ENST00000496427 BCL11BQ9C0K0 894 aaPredicted RBP10.06□□□□□ -0.8
CHCHD3-206ENST00000496427 CABP1Q9NZU7 370 aa10.06□□□□□ -0.8
CHCHD3-206ENST00000496427 DOT1LQ8TEK3 1739 aa10.06□□□□□ -0.8
CHCHD3-206ENST00000496427 WDR17Q8IZU2 1322 aa10.06□□□□□ -0.8
CHCHD3-206ENST00000496427 COL24A1Q17RW2 1714 aa10.05□□□□□ -0.8
CHCHD3-206ENST00000496427 SHANK3Q9BYB0 1731 aa10.05□□□□□ -0.8
CHCHD3-206ENST00000496427 PLSCR1O15162 318 aa10.05□□□□□ -0.8
CHCHD3-206ENST00000496427 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
CHCHD3-206ENST00000496427 ABCC6O95255 1503 aa10.05□□□□□ -0.8
CHCHD3-206ENST00000496427 TNS2Q63HR2 1409 aa10.05□□□□□ -0.8
CHCHD3-206ENST00000496427 BRD4O60885 1362 aaPredicted RBP10.04□□□□□ -0.8
CHCHD3-206ENST00000496427 PTGER2P43116 358 aa10.04□□□□□ -0.8
CHCHD3-206ENST00000496427 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
CHCHD3-206ENST00000496427 ZNF687Q8N1G0 1237 aa10.04□□□□□ -0.8
CHCHD3-206ENST00000496427 BCL9O00512 1426 aa10.03□□□□□ -0.8
CHCHD3-206ENST00000496427 LY75O60449 1722 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms