RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 DDX54Q8TDD1 881 aaKnown RBP22.47■■□□□ 1.19
CNOT3-207ENST00000496327 EP400Q96L91 3159 aa22.46■■□□□ 1.19
CNOT3-207ENST00000496327 TRIM37O94972 964 aa22.46■■□□□ 1.19
CNOT3-207ENST00000496327 SULT6B1Q6IMI4 303 aa22.45■■□□□ 1.18
CNOT3-207ENST00000496327 AEBP1Q8IUX7 1158 aa22.45■■□□□ 1.18
CNOT3-207ENST00000496327 PLEKHG2Q9H7P9 1386 aa22.45■■□□□ 1.18
CNOT3-207ENST00000496327 KDRP35968 1356 aa22.44■■□□□ 1.18
CNOT3-207ENST00000496327 PCDH11XQ9BZA7 1347 aa22.44■■□□□ 1.18
CNOT3-207ENST00000496327 PCDH11YQ9BZA8 1340 aa22.44■■□□□ 1.18
CNOT3-207ENST00000496327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.44■■□□□ 1.18
CNOT3-207ENST00000496327 SPG7Q9UQ90 795 aa22.44■■□□□ 1.18
CNOT3-207ENST00000496327 U2SURPO15042 1029 aaKnown RBP22.41■■□□□ 1.18
CNOT3-207ENST00000496327 BAG6P46379 1132 aa22.41■■□□□ 1.18
CNOT3-207ENST00000496327 NUDCQ9Y266 331 aa22.41■■□□□ 1.18
CNOT3-207ENST00000496327 RGPD1P0DJD0 1748 aa22.4■■□□□ 1.18
CNOT3-207ENST00000496327 MYBBP1AQ9BQG0 1328 aaKnown RBP22.4■■□□□ 1.18
CNOT3-207ENST00000496327 HMOX1P09601 288 aa22.39■■□□□ 1.17
CNOT3-207ENST00000496327 PLEKHO1Q53GL0 409 aaPredicted RBP22.39■■□□□ 1.17
CNOT3-207ENST00000496327 DEFB132Q7Z7B7 95 aa22.39■■□□□ 1.17
CNOT3-207ENST00000496327 BCL11BQ9C0K0 894 aaPredicted RBP22.39■■□□□ 1.17
CNOT3-207ENST00000496327 PRKRIP1Q9H875 184 aaPredicted RBP22.39■■□□□ 1.17
CNOT3-207ENST00000496327 CYP27B1O15528 508 aa22.38■■□□□ 1.17
CNOT3-207ENST00000496327 AMOTQ4VCS5 1084 aa22.38■■□□□ 1.17
CNOT3-207ENST00000496327 ACSBG1Q96GR2 724 aa22.38■■□□□ 1.17
CNOT3-207ENST00000496327 APBA3O96018 575 aa22.37■■□□□ 1.17
CNOT3-207ENST00000496327 PKD1L3Q7Z443 1732 aa22.36■■□□□ 1.17
CNOT3-207ENST00000496327 KCNQ2O43526 872 aa22.35■■□□□ 1.17
CNOT3-207ENST00000496327 IFNL2Q8IZJ0 200 aa22.35■■□□□ 1.17
CNOT3-207ENST00000496327 SHANK3Q9BYB0 1731 aa22.34■■□□□ 1.17
CNOT3-207ENST00000496327 PHKG2P15735 406 aa22.34■■□□□ 1.17
CNOT3-207ENST00000496327 PTF1AQ7RTS3 328 aa22.34■■□□□ 1.17
CNOT3-207ENST00000496327 U2AF1L5P0DN76 240 aaPredicted RBP22.33■■□□□ 1.17
CNOT3-207ENST00000496327 U2AF1Q01081 240 aaKnown RBP eCLIP22.33■■□□□ 1.17
CNOT3-207ENST00000496327 EN1Q05925 392 aaPredicted RBP22.33■■□□□ 1.17
CNOT3-207ENST00000496327 NKX1-1Q15270 411 aaPredicted RBP22.33■■□□□ 1.17
CNOT3-207ENST00000496327 ZNF530Q6P9A1 599 aaPredicted RBP22.33■■□□□ 1.17
CNOT3-207ENST00000496327 TNS1Q9HBL0 1735 aaKnown RBP22.33■■□□□ 1.17
CNOT3-207ENST00000496327 PRIM1P49642 420 aaKnown RBP22.31■■□□□ 1.16
CNOT3-207ENST00000496327 SYTL4Q96C24 671 aaPredicted RBP22.31■■□□□ 1.16
CNOT3-207ENST00000496327 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
CNOT3-207ENST00000496327 C1orf141Q5JVX7 400 aa22.3■■□□□ 1.16
CNOT3-207ENST00000496327 CAMKK2Q96RR4 588 aa22.3■■□□□ 1.16
CNOT3-207ENST00000496327 RSPH6AQ9H0K4 717 aa22.3■■□□□ 1.16
CNOT3-207ENST00000496327 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
CNOT3-207ENST00000496327 PLSCR1O15162 318 aa22.28■■□□□ 1.16
CNOT3-207ENST00000496327 ANP32CO43423 234 aa22.28■■□□□ 1.16
CNOT3-207ENST00000496327 PRKAR2BP31323 418 aa22.28■■□□□ 1.16
CNOT3-207ENST00000496327 EZH2Q15910 746 aaKnown RBP22.28■■□□□ 1.16
CNOT3-207ENST00000496327 SBF2Q86WG5 1849 aa22.27■■□□□ 1.16
CNOT3-207ENST00000496327 FCHSD2O94868 740 aa22.27■■□□□ 1.16
CNOT3-207ENST00000496327 MTHFSDQ2M296 383 aaKnown RBP22.26■■□□□ 1.15
CNOT3-207ENST00000496327 AKAP4Q5JQC9 854 aa22.25■■□□□ 1.15
CNOT3-207ENST00000496327 GAS2L2Q8NHY3 880 aa22.25■■□□□ 1.15
CNOT3-207ENST00000496327 DCAF5Q96JK2 942 aa22.25■■□□□ 1.15
CNOT3-207ENST00000496327 DOT1LQ8TEK3 1739 aa22.24■■□□□ 1.15
CNOT3-207ENST00000496327 MPRIPQ6WCQ1 1025 aa22.23■■□□□ 1.15
CNOT3-207ENST00000496327 ERVV-2B6SEH9 535 aa22.22■■□□□ 1.15
CNOT3-207ENST00000496327 KDM6AO15550 1401 aaPredicted RBP22.22■■□□□ 1.15
CNOT3-207ENST00000496327 PHACTR3Q96KR7 559 aa22.21■■□□□ 1.15
CNOT3-207ENST00000496327 TMOD3Q9NYL9 352 aa22.21■■□□□ 1.15
CNOT3-207ENST00000496327 NEFMP07197 916 aa22.2■■□□□ 1.14
CNOT3-207ENST00000496327 TXNRD1Q16881 649 aa22.2■■□□□ 1.14
CNOT3-207ENST00000496327 PIGBQ92521 554 aa22.2■■□□□ 1.14
CNOT3-207ENST00000496327 PNNQ9H307 717 aaKnown RBP22.2■■□□□ 1.14
CNOT3-207ENST00000496327 WDR43Q15061 677 aaKnown RBP eCLIP22.19■■□□□ 1.14
CNOT3-207ENST00000496327 TOGARAM1Q9Y4F4 1720 aa22.19■■□□□ 1.14
CNOT3-207ENST00000496327 MAP3K5Q99683 1374 aa22.18■■□□□ 1.14
CNOT3-207ENST00000496327 CABP4P57796 275 aa22.18■■□□□ 1.14
CNOT3-207ENST00000496327 PROM2Q8N271 834 aa22.18■■□□□ 1.14
CNOT3-207ENST00000496327 BTAF1O14981 1849 aa22.17■■□□□ 1.14
CNOT3-207ENST00000496327 RGPD3A6NKT7 1758 aaPredicted RBP22.17■■□□□ 1.14
CNOT3-207ENST00000496327 RGPD4Q7Z3J3 1758 aa22.17■■□□□ 1.14
CNOT3-207ENST00000496327 GNAT3A8MTJ3 354 aa22.16■■□□□ 1.14
CNOT3-207ENST00000496327 RNMTO43148 476 aaKnown RBP22.16■■□□□ 1.14
CNOT3-207ENST00000496327 SMARCC1Q92922 1105 aaPredicted RBP22.16■■□□□ 1.14
CNOT3-207ENST00000496327 PLEKHF1Q96S99 279 aa22.16■■□□□ 1.14
CNOT3-207ENST00000496327 MAPK8IP3Q9UPT6 1336 aa22.15■■□□□ 1.14
CNOT3-207ENST00000496327 SLC27A3Q5K4L6 730 aa22.15■■□□□ 1.14
CNOT3-207ENST00000496327 PALLDQ8WX93 1383 aa22.14■■□□□ 1.14
CNOT3-207ENST00000496327 NBPF14Q5TI25 921 aa22.14■■□□□ 1.13
CNOT3-207ENST00000496327 LGR6Q9HBX8 967 aa22.14■■□□□ 1.13
CNOT3-207ENST00000496327 RREB1Q92766 1687 aa22.14■■□□□ 1.13
CNOT3-207ENST00000496327 KAT6BQ8WYB5 2073 aa22.12■■□□□ 1.13
CNOT3-207ENST00000496327 SLC52A2Q9HAB3 445 aa22.12■■□□□ 1.13
CNOT3-207ENST00000496327 CCDC184Q52MB2 194 aa22.11■■□□□ 1.13
CNOT3-207ENST00000496327 NFATC2IPQ8NCF5 419 aa22.11■■□□□ 1.13
CNOT3-207ENST00000496327 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
CNOT3-207ENST00000496327 CCNL1Q9UK58 526 aaPredicted RBP22.11■■□□□ 1.13
CNOT3-207ENST00000496327 ASAP1Q9ULH1 1129 aa22.11■■□□□ 1.13
CNOT3-207ENST00000496327 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
CNOT3-207ENST00000496327 MRC1P22897 1456 aa22.1■■□□□ 1.13
CNOT3-207ENST00000496327 NFE2L2Q16236 605 aa22.1■■□□□ 1.13
CNOT3-207ENST00000496327 IL17REQ8NFR9 667 aa22.1■■□□□ 1.13
CNOT3-207ENST00000496327 RTF1Q92541 710 aaKnown RBP22.1■■□□□ 1.13
CNOT3-207ENST00000496327 MRS2Q9HD23 443 aa22.1■■□□□ 1.13
CNOT3-207ENST00000496327 LRRC4BQ9NT99 713 aa22.1■■□□□ 1.13
CNOT3-207ENST00000496327 NUP188Q5SRE5 1749 aa22.09■■□□□ 1.13
CNOT3-207ENST00000496327 HTATSF1O43719 755 aaKnown RBP22.09■■□□□ 1.13
CNOT3-207ENST00000496327 ANO8Q9HCE9 1232 aaPredicted RBP22.08■■□□□ 1.13
CNOT3-207ENST00000496327 ITGB4P16144 1822 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms