RNA–Protein interactions for RNA: ENST00000495581.1

SMIM29-208, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 911 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-208ENST00000495581 APBA3O96018 575 aa28.26■■■□□ 2.11
SMIM29-208ENST00000495581 BCL11BQ9C0K0 894 aaPredicted RBP28.26■■■□□ 2.11
SMIM29-208ENST00000495581 CFAP53Q96M91 514 aa28.25■■■□□ 2.11
SMIM29-208ENST00000495581 SPG7Q9UQ90 795 aa28.25■■■□□ 2.11
SMIM29-208ENST00000495581 PCDH11XQ9BZA7 1347 aa28.24■■■□□ 2.11
SMIM29-208ENST00000495581 PCDH11YQ9BZA8 1340 aa28.24■■■□□ 2.11
SMIM29-208ENST00000495581 PPP2R1AP30153 589 aa28.24■■■□□ 2.11
SMIM29-208ENST00000495581 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.24■■■□□ 2.11
SMIM29-208ENST00000495581 PLEKHG2Q9H7P9 1386 aa28.23■■■□□ 2.11
SMIM29-208ENST00000495581 TNS1Q9HBL0 1735 aaKnown RBP28.21■■■□□ 2.11
SMIM29-208ENST00000495581 ZNF316A6NFI3 1004 aaPredicted RBP28.21■■■□□ 2.11
SMIM29-208ENST00000495581 EN1Q05925 392 aaPredicted RBP28.21■■■□□ 2.11
SMIM29-208ENST00000495581 SULT6B1Q6IMI4 303 aa28.2■■■□□ 2.1
SMIM29-208ENST00000495581 PARD3Q8TEW0 1356 aa28.2■■■□□ 2.1
SMIM29-208ENST00000495581 SBF2Q86WG5 1849 aa28.2■■■□□ 2.1
SMIM29-208ENST00000495581 RALBP1Q15311 655 aa28.18■■■□□ 2.1
SMIM29-208ENST00000495581 ACSBG1Q96GR2 724 aa28.18■■■□□ 2.1
SMIM29-208ENST00000495581 AEBP1Q8IUX7 1158 aa28.17■■■□□ 2.1
SMIM29-208ENST00000495581 KDRP35968 1356 aa28.16■■■□□ 2.1
SMIM29-208ENST00000495581 PLEKHO1Q53GL0 409 aaPredicted RBP28.16■■■□□ 2.1
SMIM29-208ENST00000495581 CAMKK2Q96RR4 588 aa28.16■■■□□ 2.1
SMIM29-208ENST00000495581 SHANK3Q9BYB0 1731 aa28.15■■■□□ 2.1
SMIM29-208ENST00000495581 PLSCR1O15162 318 aa28.15■■■□□ 2.1
SMIM29-208ENST00000495581 CYP27B1O15528 508 aa28.15■■■□□ 2.1
SMIM29-208ENST00000495581 KCNQ2O43526 872 aa28.15■■■□□ 2.1
SMIM29-208ENST00000495581 AMOTQ4VCS5 1084 aa28.15■■■□□ 2.1
SMIM29-208ENST00000495581 PKD1L3Q7Z443 1732 aa28.15■■■□□ 2.1
SMIM29-208ENST00000495581 EZH2Q15910 746 aaKnown RBP28.14■■■□□ 2.1
SMIM29-208ENST00000495581 PTF1AQ7RTS3 328 aa28.14■■■□□ 2.1
SMIM29-208ENST00000495581 NUDCQ9Y266 331 aa28.14■■■□□ 2.1
SMIM29-208ENST00000495581 COL3A1P02461 1466 aaPredicted RBP28.14■■■□□ 2.09
SMIM29-208ENST00000495581 U2SURPO15042 1029 aaKnown RBP28.13■■■□□ 2.09
SMIM29-208ENST00000495581 IFNL2Q8IZJ0 200 aa28.13■■■□□ 2.09
SMIM29-208ENST00000495581 NHSQ6T4R5 1651 aa28.12■■■□□ 2.09
SMIM29-208ENST00000495581 SYTL4Q96C24 671 aaPredicted RBP28.11■■■□□ 2.09
SMIM29-208ENST00000495581 KAT6BQ8WYB5 2073 aa28.11■■■□□ 2.09
SMIM29-208ENST00000495581 HMOX1P09601 288 aa28.1■■■□□ 2.09
SMIM29-208ENST00000495581 PRIM1P49642 420 aaKnown RBP28.1■■■□□ 2.09
SMIM29-208ENST00000495581 NKX1-1Q15270 411 aaPredicted RBP28.1■■■□□ 2.09
SMIM29-208ENST00000495581 PHKG2P15735 406 aa28.08■■■□□ 2.09
SMIM29-208ENST00000495581 HSP90AB1P08238 724 aaKnown RBP28.07■■■□□ 2.08
SMIM29-208ENST00000495581 ZNF530Q6P9A1 599 aaPredicted RBP28.07■■■□□ 2.08
SMIM29-208ENST00000495581 C1orf141Q5JVX7 400 aa28.05■■■□□ 2.08
SMIM29-208ENST00000495581 RGPD3A6NKT7 1758 aaPredicted RBP28.04■■■□□ 2.08
SMIM29-208ENST00000495581 RGPD4Q7Z3J3 1758 aa28.04■■■□□ 2.08
SMIM29-208ENST00000495581 DOT1LQ8TEK3 1739 aa28.04■■■□□ 2.08
SMIM29-208ENST00000495581 MYBBP1AQ9BQG0 1328 aaKnown RBP28.03■■■□□ 2.08
SMIM29-208ENST00000495581 U2AF1L5P0DN76 240 aaPredicted RBP28.02■■■□□ 2.08
SMIM29-208ENST00000495581 U2AF1Q01081 240 aaKnown RBP eCLIP28.02■■■□□ 2.08
SMIM29-208ENST00000495581 NBPF14Q5TI25 921 aa28.01■■■□□ 2.07
SMIM29-208ENST00000495581 DCAF5Q96JK2 942 aa28.01■■■□□ 2.07
SMIM29-208ENST00000495581 BTAF1O14981 1849 aa28.01■■■□□ 2.07
SMIM29-208ENST00000495581 TXNRD1Q16881 649 aa28■■■□□ 2.07
SMIM29-208ENST00000495581 MPRIPQ6WCQ1 1025 aa28■■■□□ 2.07
SMIM29-208ENST00000495581 PRKRIP1Q9H875 184 aaPredicted RBP27.99■■■□□ 2.07
SMIM29-208ENST00000495581 PROM2Q8N271 834 aa27.98■■■□□ 2.07
SMIM29-208ENST00000495581 RREB1Q92766 1687 aa27.97■■■□□ 2.07
SMIM29-208ENST00000495581 FCHSD2O94868 740 aa27.97■■■□□ 2.07
SMIM29-208ENST00000495581 AKAP4Q5JQC9 854 aa27.97■■■□□ 2.07
SMIM29-208ENST00000495581 TMOD3Q9NYL9 352 aa27.97■■■□□ 2.07
SMIM29-208ENST00000495581 ERVV-2B6SEH9 535 aa27.96■■■□□ 2.07
SMIM29-208ENST00000495581 MTHFSDQ2M296 383 aaKnown RBP27.95■■■□□ 2.06
SMIM29-208ENST00000495581 RSPH6AQ9H0K4 717 aa27.95■■■□□ 2.06
SMIM29-208ENST00000495581 PRKAR2BP31323 418 aa27.94■■■□□ 2.06
SMIM29-208ENST00000495581 SLC27A3Q5K4L6 730 aa27.94■■■□□ 2.06
SMIM29-208ENST00000495581 GAS2L2Q8NHY3 880 aa27.94■■■□□ 2.06
SMIM29-208ENST00000495581 PIGBQ92521 554 aa27.94■■■□□ 2.06
SMIM29-208ENST00000495581 SMARCC1Q92922 1105 aaPredicted RBP27.93■■■□□ 2.06
SMIM29-208ENST00000495581 NUP188Q5SRE5 1749 aa27.92■■■□□ 2.06
SMIM29-208ENST00000495581 TOGARAM1Q9Y4F4 1720 aa27.92■■■□□ 2.06
SMIM29-208ENST00000495581 NEFMP07197 916 aa27.9■■■□□ 2.06
SMIM29-208ENST00000495581 HMGB2P26583 209 aaKnown RBP27.9■■■□□ 2.06
SMIM29-208ENST00000495581 CABP4P57796 275 aa27.9■■■□□ 2.06
SMIM29-208ENST00000495581 PNNQ9H307 717 aaKnown RBP27.9■■■□□ 2.06
SMIM29-208ENST00000495581 KDM6AO15550 1401 aaPredicted RBP27.9■■■□□ 2.06
SMIM29-208ENST00000495581 ITGB4P16144 1822 aa27.9■■■□□ 2.06
SMIM29-208ENST00000495581 R3HDM1Q15032 1099 aaKnown RBP27.89■■■□□ 2.06
SMIM29-208ENST00000495581 PSDA5PKW4 1024 aaPredicted RBP27.88■■■□□ 2.05
SMIM29-208ENST00000495581 PHACTR3Q96KR7 559 aa27.88■■■□□ 2.05
SMIM29-208ENST00000495581 PALLDQ8WX93 1383 aa27.87■■■□□ 2.05
SMIM29-208ENST00000495581 STK32BQ9NY57 414 aa27.87■■■□□ 2.05
SMIM29-208ENST00000495581 CCNL1Q9UK58 526 aaPredicted RBP27.87■■■□□ 2.05
SMIM29-208ENST00000495581 GNAT3A8MTJ3 354 aa27.85■■■□□ 2.05
SMIM29-208ENST00000495581 ANP32CO43423 234 aa27.85■■■□□ 2.05
SMIM29-208ENST00000495581 LRRC4BQ9NT99 713 aa27.85■■■□□ 2.05
SMIM29-208ENST00000495581 RNMTO43148 476 aaKnown RBP27.84■■■□□ 2.05
SMIM29-208ENST00000495581 MAP3K5Q99683 1374 aa27.84■■■□□ 2.05
SMIM29-208ENST00000495581 NFATC2IPQ8NCF5 419 aa27.83■■■□□ 2.05
SMIM29-208ENST00000495581 LGR6Q9HBX8 967 aa27.83■■■□□ 2.05
SMIM29-208ENST00000495581 ASAP1Q9ULH1 1129 aa27.83■■■□□ 2.05
SMIM29-208ENST00000495581 LY75O60449 1722 aa27.83■■■□□ 2.05
SMIM29-208ENST00000495581 SLC15A2Q16348 729 aa27.82■■■□□ 2.04
SMIM29-208ENST00000495581 ANO8Q9HCE9 1232 aaPredicted RBP27.82■■■□□ 2.04
SMIM29-208ENST00000495581 WDR43Q15061 677 aaKnown RBP eCLIP27.81■■■□□ 2.04
SMIM29-208ENST00000495581 SLC52A2Q9HAB3 445 aa27.81■■■□□ 2.04
SMIM29-208ENST00000495581 ATG3Q9NT62 314 aa27.81■■■□□ 2.04
SMIM29-208ENST00000495581 SCN11AQ9UI33 1791 aa27.8■■■□□ 2.04
SMIM29-208ENST00000495581 MAPK8IP3Q9UPT6 1336 aa27.79■■■□□ 2.04
SMIM29-208ENST00000495581 KCNQ4P56696 695 aa27.79■■■□□ 2.04
SMIM29-208ENST00000495581 LOC102724428A0A0B4J2F2 783 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms