RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	CRB1	P82279	1406 aa		12.05	□□□□□ -0.48
PCDH15-223	ENST00000495484	NGLY1	Q96IV0	654 aa		12.04	□□□□□ -0.48
PCDH15-223	ENST00000495484	FAM208A	Q9UK61	1670 aa	Known RBP	12.04	□□□□□ -0.48
PCDH15-223	ENST00000495484	AKAP4	Q5JQC9	854 aa		12.04	□□□□□ -0.48
PCDH15-223	ENST00000495484	C1orf141	Q5JVX7	400 aa		12.04	□□□□□ -0.48
PCDH15-223	ENST00000495484	TRMT2A	Q8IZ69	625 aa	Known RBP	12.04	□□□□□ -0.48
PCDH15-223	ENST00000495484	CDCA7L	Q96GN5	454 aa		12.04	□□□□□ -0.48
PCDH15-223	ENST00000495484	IL2RB	P14784	551 aa		12.03	□□□□□ -0.48
PCDH15-223	ENST00000495484	MEX3C	Q5U5Q3	659 aa	Known RBP	12.03	□□□□□ -0.48
PCDH15-223	ENST00000495484	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.03	□□□□□ -0.48
PCDH15-223	ENST00000495484	THRAP3	Q9Y2W1	955 aa	Known RBP	12.03	□□□□□ -0.48
PCDH15-223	ENST00000495484	GNAI1	P63096	354 aa		12.02	□□□□□ -0.48
PCDH15-223	ENST00000495484	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.02	□□□□□ -0.48
PCDH15-223	ENST00000495484	UNC5CL	Q8IV45	518 aa		12.02	□□□□□ -0.48
PCDH15-223	ENST00000495484	C8orf37	Q96NL8	207 aa		12.02	□□□□□ -0.48
PCDH15-223	ENST00000495484	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.02	□□□□□ -0.48
PCDH15-223	ENST00000495484	MAP3K5	Q99683	1374 aa		12.02	□□□□□ -0.49
PCDH15-223	ENST00000495484	DUSP27	Q5VZP5	1158 aa		12.02	□□□□□ -0.49
PCDH15-223	ENST00000495484	IFT57	Q9NWB7	429 aa		12.02	□□□□□ -0.49
PCDH15-223	ENST00000495484	SLIT2	O94813	1529 aa		12.01	□□□□□ -0.49
PCDH15-223	ENST00000495484	FBXO41	Q8TF61	875 aa		12.01	□□□□□ -0.49
PCDH15-223	ENST00000495484	HSP90AB1	P08238	724 aa	Known RBP	12	□□□□□ -0.49
PCDH15-223	ENST00000495484	IFNL2	Q8IZJ0	200 aa		12	□□□□□ -0.49
PCDH15-223	ENST00000495484	ZCRB1	Q8TBF4	217 aa	Known RBP	12	□□□□□ -0.49
PCDH15-223	ENST00000495484	CFAP44	Q96MT7	982 aa		12	□□□□□ -0.49
PCDH15-223	ENST00000495484	RGPD5	Q99666	1765 aa		12	□□□□□ -0.49
PCDH15-223	ENST00000495484	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12	□□□□□ -0.49
PCDH15-223	ENST00000495484	USP35	Q9P2H5	1018 aa		12	□□□□□ -0.49
PCDH15-223	ENST00000495484	OVOS2	A0A0G2JMS6	1433 aa		11.99	□□□□□ -0.49
PCDH15-223	ENST00000495484	VPS72	Q15906	364 aa		11.99	□□□□□ -0.49
PCDH15-223	ENST00000495484	MCM10	Q7L590	875 aa		11.99	□□□□□ -0.49
PCDH15-223	ENST00000495484	BABAM1	Q9NWV8	329 aa		11.99	□□□□□ -0.49
PCDH15-223	ENST00000495484	CCDC9	Q9Y3X0	531 aa	Known RBP	11.99	□□□□□ -0.49
PCDH15-223	ENST00000495484	SPATA31A1	Q5TZJ5	1347 aa		11.99	□□□□□ -0.49
PCDH15-223	ENST00000495484	SPATA31A5	Q5VU36	1347 aa		11.99	□□□□□ -0.49
PCDH15-223	ENST00000495484	SPATA31A7	Q8IWB4	1347 aa		11.99	□□□□□ -0.49
PCDH15-223	ENST00000495484	MEGF6	O75095	1541 aa		11.98	□□□□□ -0.49
PCDH15-223	ENST00000495484	CT47B1	P0C2W7	299 aa	Predicted RBP	11.98	□□□□□ -0.49
PCDH15-223	ENST00000495484	ZNF853	P0CG23	659 aa		11.98	□□□□□ -0.49
PCDH15-223	ENST00000495484	DCTN1	Q14203	1278 aa		11.98	□□□□□ -0.49
PCDH15-223	ENST00000495484	USP21	Q9UK80	565 aa		11.98	□□□□□ -0.49
PCDH15-223	ENST00000495484	PCDH11X	Q9BZA7	1347 aa		11.98	□□□□□ -0.49
PCDH15-223	ENST00000495484	PCDH11Y	Q9BZA8	1340 aa		11.98	□□□□□ -0.49
PCDH15-223	ENST00000495484	PHKG2	P15735	406 aa		11.97	□□□□□ -0.49
PCDH15-223	ENST00000495484	BARGIN	Q6ZT62	677 aa		11.97	□□□□□ -0.49
PCDH15-223	ENST00000495484	IL17RE	Q8NFR9	667 aa		11.97	□□□□□ -0.49
PCDH15-223	ENST00000495484	THUMPD2	Q9BTF0	503 aa	Known RBP	11.97	□□□□□ -0.49
PCDH15-223	ENST00000495484	LAS1L	Q9Y4W2	734 aa	Known RBP	11.97	□□□□□ -0.49
PCDH15-223	ENST00000495484	LRP6	O75581	1613 aa		11.97	□□□□□ -0.49
PCDH15-223	ENST00000495484	CHL1	O00533	1208 aa		11.97	□□□□□ -0.49
PCDH15-223	ENST00000495484	TAF7	Q15545	349 aa	Predicted RBP	11.97	□□□□□ -0.49
PCDH15-223	ENST00000495484	DCAF5	Q96JK2	942 aa		11.97	□□□□□ -0.49
PCDH15-223	ENST00000495484	RGPD2	P0DJD1	1756 aa		11.96	□□□□□ -0.49
PCDH15-223	ENST00000495484	BCL9L	Q86UU0	1499 aa		11.96	□□□□□ -0.49
PCDH15-223	ENST00000495484	CEMIP	Q8WUJ3	1361 aa		11.96	□□□□□ -0.49
PCDH15-223	ENST00000495484	FANCI	Q9NVI1	1328 aa		11.96	□□□□□ -0.49
PCDH15-223	ENST00000495484	EXOC5	O00471	708 aa		11.96	□□□□□ -0.49
PCDH15-223	ENST00000495484	RNMT	O43148	476 aa	Known RBP	11.96	□□□□□ -0.49
PCDH15-223	ENST00000495484	TEF	Q10587	303 aa		11.96	□□□□□ -0.49
PCDH15-223	ENST00000495484	RCAN3	Q9UKA8	241 aa		11.96	□□□□□ -0.49
PCDH15-223	ENST00000495484	NWD2	Q9ULI1	1742 aa		11.96	□□□□□ -0.5
PCDH15-223	ENST00000495484	CYP27B1	O15528	508 aa		11.95	□□□□□ -0.5
PCDH15-223	ENST00000495484	MPRIP	Q6WCQ1	1025 aa		11.95	□□□□□ -0.5
PCDH15-223	ENST00000495484	DISP2	A7MBM2	1401 aa		11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	AFF2	P51816	1311 aa		11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	PLCH1	Q4KWH8	1693 aa		11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	NKX1-1	Q15270	411 aa	Predicted RBP	11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	TSR2	Q969E8	191 aa	Known RBP	11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	ZNF428	Q96B54	188 aa		11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	LGR6	Q9HBX8	967 aa		11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	MBIP	Q9NS73	344 aa		11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	TSPYL4	Q9UJ04	414 aa		11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	TRPC5	Q9UL62	973 aa	Predicted RBP	11.94	□□□□□ -0.5
PCDH15-223	ENST00000495484	DDX54	Q8TDD1	881 aa	Known RBP	11.93	□□□□□ -0.5
PCDH15-223	ENST00000495484	ERVV-2	B6SEH9	535 aa		11.93	□□□□□ -0.5
PCDH15-223	ENST00000495484	EXOSC9	Q06265	439 aa	Known RBP	11.93	□□□□□ -0.5
PCDH15-223	ENST00000495484	DDB1	Q16531	1140 aa		11.93	□□□□□ -0.5
PCDH15-223	ENST00000495484	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.93	□□□□□ -0.5
PCDH15-223	ENST00000495484	NRAP	Q86VF7	1730 aa		11.92	□□□□□ -0.5
PCDH15-223	ENST00000495484	PARP4	Q9UKK3	1724 aa	Known RBP	11.92	□□□□□ -0.5
PCDH15-223	ENST00000495484	CHMP4A	Q9BY43	222 aa		11.92	□□□□□ -0.5
PCDH15-223	ENST00000495484	BTBD11	A6QL63	1104 aa		11.91	□□□□□ -0.5
PCDH15-223	ENST00000495484	GJD4	Q96KN9	370 aa	Predicted RBP	11.91	□□□□□ -0.5
PCDH15-223	ENST00000495484	SLC52A2	Q9HAB3	445 aa		11.91	□□□□□ -0.5
PCDH15-223	ENST00000495484	SOS1	Q07889	1333 aa	Predicted RBP	11.91	□□□□□ -0.5
PCDH15-223	ENST00000495484	NEFL	P07196	543 aa		11.91	□□□□□ -0.5
PCDH15-223	ENST00000495484	CABP4	P57796	275 aa		11.91	□□□□□ -0.5
PCDH15-223	ENST00000495484	ZNF772	Q68DY9	489 aa	Predicted RBP	11.91	□□□□□ -0.5
PCDH15-223	ENST00000495484	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.91	□□□□□ -0.5
PCDH15-223	ENST00000495484	PKD1L3	Q7Z443	1732 aa		11.9	□□□□□ -0.5
PCDH15-223	ENST00000495484	FAM98C	Q17RN3	349 aa	Known RBP	11.9	□□□□□ -0.5
PCDH15-223	ENST00000495484	DLG5	Q8TDM6	1919 aa		11.89	□□□□□ -0.51
PCDH15-223	ENST00000495484	TNS2	Q63HR2	1409 aa		11.89	□□□□□ -0.51
PCDH15-223	ENST00000495484	QTRT2	Q9H974	415 aa	Known RBP	11.89	□□□□□ -0.51
PCDH15-223	ENST00000495484	MIS18A	Q9NYP9	233 aa		11.89	□□□□□ -0.51
PCDH15-223	ENST00000495484	RNF123	Q5XPI4	1314 aa		11.89	□□□□□ -0.51
PCDH15-223	ENST00000495484	KDM6A	O15550	1401 aa	Predicted RBP	11.89	□□□□□ -0.51
PCDH15-223	ENST00000495484	ATRN	O75882	1429 aa		11.89	□□□□□ -0.51
PCDH15-223	ENST00000495484	ONECUT3	O60422	494 aa	Predicted RBP	11.89	□□□□□ -0.51
PCDH15-223	ENST00000495484	RARS	P54136	660 aa	Known RBP	11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms