RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 RANBP17Q9H2T7 1088 aaKnown RBP11.49□□□□□ -0.57
RPSA-209ENST00000495394 GNL3LQ9NVN8 582 aaKnown RBP11.48□□□□□ -0.57
RPSA-209ENST00000495394 HFM1A2PYH4 1435 aa11.48□□□□□ -0.57
RPSA-209ENST00000495394 CCDC194A0A1B0GVG4 234 aa11.48□□□□□ -0.57
RPSA-209ENST00000495394 SF3B2Q13435 895 aaKnown RBP11.48□□□□□ -0.57
RPSA-209ENST00000495394 ACRBPQ8NEB7 543 aa11.48□□□□□ -0.57
RPSA-209ENST00000495394 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
RPSA-209ENST00000495394 RNF17Q9BXT8 1623 aaKnown RBP11.47□□□□□ -0.57
RPSA-209ENST00000495394 WDHD1O75717 1129 aaPredicted RBP11.47□□□□□ -0.57
RPSA-209ENST00000495394 PARNO95453 639 aaKnown RBP11.47□□□□□ -0.57
RPSA-209ENST00000495394 ZNF853P0CG23 659 aa11.47□□□□□ -0.57
RPSA-209ENST00000495394 NRBP1Q9UHY1 535 aa11.47□□□□□ -0.57
RPSA-209ENST00000495394 FER1L4A9Z1Z3 1794 aa11.47□□□□□ -0.57
RPSA-209ENST00000495394 CTAGE5O15320 804 aa11.47□□□□□ -0.57
RPSA-209ENST00000495394 HSPA2P54652 639 aa11.47□□□□□ -0.57
RPSA-209ENST00000495394 PPP4CP60510 307 aa11.47□□□□□ -0.57
RPSA-209ENST00000495394 ARPC5LQ9BPX5 153 aa11.47□□□□□ -0.57
RPSA-209ENST00000495394 RRP7BPQ9NSQ0 103 aa11.47□□□□□ -0.57
RPSA-209ENST00000495394 PUF60Q9UHX1 559 aaKnown RBP11.47□□□□□ -0.57
RPSA-209ENST00000495394 PDZRN3Q9UPQ7 1066 aa11.47□□□□□ -0.57
RPSA-209ENST00000495394 CTDP1Q9Y5B0 961 aaPredicted RBP11.47□□□□□ -0.57
RPSA-209ENST00000495394 DEPDC5O75140 1603 aa11.46□□□□□ -0.57
RPSA-209ENST00000495394 CFAP69A5D8W1 941 aa11.46□□□□□ -0.57
RPSA-209ENST00000495394 PAX7P23759 505 aa11.46□□□□□ -0.57
RPSA-209ENST00000495394 DMRT2Q9Y5R5 561 aa11.46□□□□□ -0.57
RPSA-209ENST00000495394 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
RPSA-209ENST00000495394 EIF3JO75822 258 aaKnown RBP11.45□□□□□ -0.58
RPSA-209ENST00000495394 NAT1P18440 290 aa11.45□□□□□ -0.58
RPSA-209ENST00000495394 PEX19P40855 299 aa11.45□□□□□ -0.58
RPSA-209ENST00000495394 CCT2P78371 535 aaKnown RBP11.45□□□□□ -0.58
RPSA-209ENST00000495394 KIAA1522Q9P206 1035 aaPredicted RBP11.45□□□□□ -0.58
RPSA-209ENST00000495394 SF3A1Q15459 793 aaKnown RBP11.45□□□□□ -0.58
RPSA-209ENST00000495394 C11orf96Q7Z7L8 435 aa11.45□□□□□ -0.58
RPSA-209ENST00000495394 NCAPGQ9BPX3 1015 aa11.45□□□□□ -0.58
RPSA-209ENST00000495394 FBXO9Q9UK97 447 aaPredicted RBP11.45□□□□□ -0.58
RPSA-209ENST00000495394 ANKRD50Q9ULJ7 1429 aa11.45□□□□□ -0.58
RPSA-209ENST00000495394 CFAP65Q6ZU64 1925 aaKnown RBP11.44□□□□□ -0.58
RPSA-209ENST00000495394 KLHL33A6NCF5 533 aa11.44□□□□□ -0.58
RPSA-209ENST00000495394 KIF1CO43896 1103 aaKnown RBP11.44□□□□□ -0.58
RPSA-209ENST00000495394 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
RPSA-209ENST00000495394 HSP90AB2PQ58FF8 381 aa11.44□□□□□ -0.58
RPSA-209ENST00000495394 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
RPSA-209ENST00000495394 PPP1R1BQ9UD71 204 aaPredicted RBP11.44□□□□□ -0.58
RPSA-209ENST00000495394 FAM135AQ9P2D6 1515 aa11.44□□□□□ -0.58
RPSA-209ENST00000495394 ZC3H13Q5T200 1668 aaKnown RBP11.44□□□□□ -0.58
RPSA-209ENST00000495394 NEFHP12036 1026 aa11.44□□□□□ -0.58
RPSA-209ENST00000495394 MIER1Q8N108 512 aa11.44□□□□□ -0.58
RPSA-209ENST00000495394 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
RPSA-209ENST00000495394 PHF8Q9UPP1 1060 aa11.44□□□□□ -0.58
RPSA-209ENST00000495394 MROH1Q8NDA8 1641 aa11.43□□□□□ -0.58
RPSA-209ENST00000495394 PRDM15P57071 1507 aaPredicted RBP11.43□□□□□ -0.58
RPSA-209ENST00000495394 NAIPQ13075 1403 aa11.43□□□□□ -0.58
RPSA-209ENST00000495394 PPP1R12AO14974 1030 aaPredicted RBP11.43□□□□□ -0.58
RPSA-209ENST00000495394 PREX1Q8TCU6 1659 aa11.43□□□□□ -0.58
RPSA-209ENST00000495394 UNC13BO14795 1591 aa11.43□□□□□ -0.58
RPSA-209ENST00000495394 IQSEC2Q5JU85 1478 aa11.42□□□□□ -0.58
RPSA-209ENST00000495394 PES1O00541 588 aaKnown RBP11.42□□□□□ -0.58
RPSA-209ENST00000495394 KIF3BO15066 747 aa11.42□□□□□ -0.58
RPSA-209ENST00000495394 IPO7O95373 1038 aaKnown RBP11.42□□□□□ -0.58
RPSA-209ENST00000495394 C4orf46Q504U0 113 aa11.42□□□□□ -0.58
RPSA-209ENST00000495394 ICE2Q659A1 982 aa11.42□□□□□ -0.58
RPSA-209ENST00000495394 LSM14AQ8ND56 463 aaKnown RBP11.42□□□□□ -0.58
RPSA-209ENST00000495394 MROH2AA6NES4 1674 aa11.42□□□□□ -0.58
RPSA-209ENST00000495394 PSMC1P62191 440 aaKnown RBP11.42□□□□□ -0.58
RPSA-209ENST00000495394 TSR1Q2NL82 804 aaKnown RBP11.42□□□□□ -0.58
RPSA-209ENST00000495394 IPO9Q96P70 1041 aaKnown RBP11.42□□□□□ -0.58
RPSA-209ENST00000495394 DONSONQ9NYP3 566 aa11.42□□□□□ -0.58
RPSA-209ENST00000495394 A6NJR5 290 aa11.41□□□□□ -0.58
RPSA-209ENST00000495394 FLT3P36888 993 aa11.41□□□□□ -0.58
RPSA-209ENST00000495394 TERF1P54274 439 aa11.41□□□□□ -0.58
RPSA-209ENST00000495394 NAP1L1P55209 391 aaKnown RBP11.41□□□□□ -0.58
RPSA-209ENST00000495394 HMGN5P82970 282 aaKnown RBP11.41□□□□□ -0.58
RPSA-209ENST00000495394 HS6ST3Q8IZP7 471 aa11.41□□□□□ -0.58
RPSA-209ENST00000495394 OGFOD1Q8N543 542 aa11.41□□□□□ -0.58
RPSA-209ENST00000495394 CWC25Q9NXE8 425 aaPredicted RBP11.41□□□□□ -0.58
RPSA-209ENST00000495394 WWC3Q9ULE0 1092 aa11.41□□□□□ -0.58
RPSA-209ENST00000495394 CLTCQ00610 1675 aaKnown RBP11.41□□□□□ -0.58
RPSA-209ENST00000495394 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.58
RPSA-209ENST00000495394 MLECQ14165 292 aa11.4□□□□□ -0.58
RPSA-209ENST00000495394 TTC30BQ8N4P2 665 aa11.4□□□□□ -0.58
RPSA-209ENST00000495394 CEP152O94986 1710 aa11.4□□□□□ -0.58
RPSA-209ENST00000495394 KIF3CO14782 793 aa11.4□□□□□ -0.58
RPSA-209ENST00000495394 SENP7Q9BQF6 1050 aa11.4□□□□□ -0.58
RPSA-209ENST00000495394 GABBR1Q9UBS5 961 aa11.4□□□□□ -0.58
RPSA-209ENST00000495394 TCF3P15923 654 aa11.39□□□□□ -0.59
RPSA-209ENST00000495394 GGT6Q6P531 493 aa11.39□□□□□ -0.59
RPSA-209ENST00000495394 CNTLNQ9NXG0 1405 aa11.39□□□□□ -0.59
RPSA-209ENST00000495394 CAPN2P17655 700 aa11.39□□□□□ -0.59
RPSA-209ENST00000495394 HDLBPQ00341 1268 aaKnown RBP11.39□□□□□ -0.59
RPSA-209ENST00000495394 VWDEQ8N2E2 1590 aa11.39□□□□□ -0.59
RPSA-209ENST00000495394 RBM46Q8TBY0 533 aaKnown RBP11.39□□□□□ -0.59
RPSA-209ENST00000495394 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
RPSA-209ENST00000495394 PNISRQ8TF01 805 aaKnown RBP11.38□□□□□ -0.59
RPSA-209ENST00000495394 CGNQ9P2M7 1197 aaKnown RBP11.38□□□□□ -0.59
RPSA-209ENST00000495394 IQGAP3Q86VI3 1631 aa11.38□□□□□ -0.59
RPSA-209ENST00000495394 CBFA2T2O43439 604 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 ABCD1P33897 745 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
RPSA-209ENST00000495394 FLIIQ13045 1269 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 SIN3AQ96ST3 1273 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms