RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 NFAT5O94916 1531 aa21.55■■□□□ 1.04
CHMP2B-205ENST00000494980 SYTL4Q96C24 671 aaPredicted RBP21.55■■□□□ 1.04
CHMP2B-205ENST00000494980 PKD1L3Q7Z443 1732 aa21.54■■□□□ 1.04
CHMP2B-205ENST00000494980 NLRP2Q9NX02 1062 aa21.53■■□□□ 1.04
CHMP2B-205ENST00000494980 NSD2O96028 1365 aa21.52■■□□□ 1.04
CHMP2B-205ENST00000494980 KCNH5Q8NCM2 988 aa21.52■■□□□ 1.04
CHMP2B-205ENST00000494980 TNRC6CQ9HCJ0 1690 aaKnown RBP21.51■■□□□ 1.03
CHMP2B-205ENST00000494980 TAF1LQ8IZX4 1826 aa21.51■■□□□ 1.03
CHMP2B-205ENST00000494980 N4BP2Q86UW6 1770 aaPredicted RBP21.51■■□□□ 1.03
CHMP2B-205ENST00000494980 KCPQ6ZWJ8 1503 aa21.5■■□□□ 1.03
CHMP2B-205ENST00000494980 PRIM1P49642 420 aaKnown RBP21.5■■□□□ 1.03
CHMP2B-205ENST00000494980 SRPK2P78362 688 aaKnown RBP21.5■■□□□ 1.03
CHMP2B-205ENST00000494980 ANKRD36BQ8N2N9 1353 aa21.49■■□□□ 1.03
CHMP2B-205ENST00000494980 KIAA1551Q9HCM1 1747 aa21.49■■□□□ 1.03
CHMP2B-205ENST00000494980 DDX54Q8TDD1 881 aaKnown RBP21.49■■□□□ 1.03
CHMP2B-205ENST00000494980 KDM2AQ9Y2K7 1162 aa21.49■■□□□ 1.03
CHMP2B-205ENST00000494980 ERBB3P21860 1342 aa21.49■■□□□ 1.03
CHMP2B-205ENST00000494980 PLEKHG2Q9H7P9 1386 aa21.48■■□□□ 1.03
CHMP2B-205ENST00000494980 C10orf71Q711Q0 1435 aa21.47■■□□□ 1.03
CHMP2B-205ENST00000494980 TOGARAM1Q9Y4F4 1720 aa21.47■■□□□ 1.03
CHMP2B-205ENST00000494980 SMC1BQ8NDV3 1235 aa21.47■■□□□ 1.03
CHMP2B-205ENST00000494980 LTN1O94822 1766 aa21.46■■□□□ 1.03
CHMP2B-205ENST00000494980 FLAD1Q8NFF5 587 aa21.46■■□□□ 1.03
CHMP2B-205ENST00000494980 CABP2Q9NPB3 220 aa21.46■■□□□ 1.03
CHMP2B-205ENST00000494980 KIF13BQ9NQT8 1826 aa21.45■■□□□ 1.03
CHMP2B-205ENST00000494980 PXDNLA1KZ92 1463 aa21.45■■□□□ 1.03
CHMP2B-205ENST00000494980 ARHGAP27Q6ZUM4 889 aa21.45■■□□□ 1.02
CHMP2B-205ENST00000494980 KIAA1210Q9ULL0 1709 aa21.44■■□□□ 1.02
CHMP2B-205ENST00000494980 CABP1Q9NZU7 370 aa21.44■■□□□ 1.02
CHMP2B-205ENST00000494980 BCS1LQ9Y276 419 aa21.44■■□□□ 1.02
CHMP2B-205ENST00000494980 UBR3Q6ZT12 1888 aa21.43■■□□□ 1.02
CHMP2B-205ENST00000494980 KDM2BQ8NHM5 1336 aa21.43■■□□□ 1.02
CHMP2B-205ENST00000494980 C9orf131Q5VYM1 1079 aa21.42■■□□□ 1.02
CHMP2B-205ENST00000494980 DCAF11Q8TEB1 546 aa21.42■■□□□ 1.02
CHMP2B-205ENST00000494980 USP47Q96K76 1375 aa21.42■■□□□ 1.02
CHMP2B-205ENST00000494980 RRAGCQ9HB90 399 aa21.42■■□□□ 1.02
CHMP2B-205ENST00000494980 BRCA1P38398 1863 aaKnown RBP21.41■■□□□ 1.02
CHMP2B-205ENST00000494980 C4BP0C0L5 1744 aa21.41■■□□□ 1.02
CHMP2B-205ENST00000494980 TTC21BQ7Z4L5 1316 aa21.39■■□□□ 1.01
CHMP2B-205ENST00000494980 ARFGEF1Q9Y6D6 1849 aa21.39■■□□□ 1.01
CHMP2B-205ENST00000494980 AMIGO3Q86WK7 504 aa21.38■■□□□ 1.01
CHMP2B-205ENST00000494980 ANKRD24Q8TF21 1146 aa21.38■■□□□ 1.01
CHMP2B-205ENST00000494980 FOXN1O15353 648 aa21.37■■□□□ 1.01
CHMP2B-205ENST00000494980 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
CHMP2B-205ENST00000494980 PHF14O94880 888 aa21.36■■□□□ 1.01
CHMP2B-205ENST00000494980 PRDM10Q9NQV6 1147 aa21.36■■□□□ 1.01
CHMP2B-205ENST00000494980 PDE4DIPQ5VU43 2346 aa21.35■■□□□ 1.01
CHMP2B-205ENST00000494980 TNRC18O15417 2968 aaPredicted RBP21.35■■□□□ 1.01
CHMP2B-205ENST00000494980 FAM208AQ9UK61 1670 aaKnown RBP21.34■■□□□ 1.01
CHMP2B-205ENST00000494980 MLLT1Q03111 559 aaPredicted RBP21.34■■□□□ 1.01
CHMP2B-205ENST00000494980 AK7Q96M32 723 aa21.34■■□□□ 1.01
CHMP2B-205ENST00000494980 SBF1O95248 1867 aa21.34■■□□□ 1.01
CHMP2B-205ENST00000494980 A0A0G2JLW4 131 aa21.33■■□□□ 1.01
CHMP2B-205ENST00000494980 FCHSD2O94868 740 aa21.33■■□□□ 1.01
CHMP2B-205ENST00000494980 TTC21AQ8NDW8 1320 aa21.32■■□□□ 1
CHMP2B-205ENST00000494980 ABHD8Q96I13 439 aa21.32■■□□□ 1
CHMP2B-205ENST00000494980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.31■■□□□ 1
CHMP2B-205ENST00000494980 RNF181Q9P0P0 153 aa21.31■■□□□ 1
CHMP2B-205ENST00000494980 NSD3Q9BZ95 1437 aa21.29■■□□□ 1
CHMP2B-205ENST00000494980 PALLDQ8WX93 1383 aa21.29■■□□□ 1
CHMP2B-205ENST00000494980 TGFB2P61812 414 aa21.29■■□□□ 1
CHMP2B-205ENST00000494980 MKRN1Q9UHC7 482 aaKnown RBP21.29■■□□□ 1
CHMP2B-205ENST00000494980 CENPJQ9HC77 1338 aaPredicted RBP21.28■■□□□ 1
CHMP2B-205ENST00000494980 MMP10P09238 476 aa21.27■■□□□ 1
CHMP2B-205ENST00000494980 HMGB2P26583 209 aaKnown RBP21.27■■□□□ 1
CHMP2B-205ENST00000494980 CTCFP49711 727 aaPredicted RBP21.27■■□□□ 1
CHMP2B-205ENST00000494980 STAC3Q96MF2 364 aa21.27■■□□□ 1
CHMP2B-205ENST00000494980 DPEP1P16444 411 aa21.26■□□□□ 0.99
CHMP2B-205ENST00000494980 RGPD2P0DJD1 1756 aa21.25■□□□□ 0.99
CHMP2B-205ENST00000494980 MON2Q7Z3U7 1717 aa21.25■□□□□ 0.99
CHMP2B-205ENST00000494980 SSFA2P28290 1259 aa21.24■□□□□ 0.99
CHMP2B-205ENST00000494980 ZCRB1Q8TBF4 217 aaKnown RBP21.24■□□□□ 0.99
CHMP2B-205ENST00000494980 AIDAQ96BJ3 306 aa21.24■□□□□ 0.99
CHMP2B-205ENST00000494980 ZNF692Q9BU19 519 aaPredicted RBP21.24■□□□□ 0.99
CHMP2B-205ENST00000494980 MEGF6O75095 1541 aa21.24■□□□□ 0.99
CHMP2B-205ENST00000494980 LBX1P52954 281 aa21.21■□□□□ 0.99
CHMP2B-205ENST00000494980 LTV1Q96GA3 475 aaPredicted RBP21.21■□□□□ 0.99
CHMP2B-205ENST00000494980 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
CHMP2B-205ENST00000494980 ITGB4P16144 1822 aa21.2■□□□□ 0.98
CHMP2B-205ENST00000494980 VEGFAP15692 232 aaPredicted RBP21.2■□□□□ 0.98
CHMP2B-205ENST00000494980 RGS19P49795 217 aa21.2■□□□□ 0.98
CHMP2B-205ENST00000494980 CREBZFQ9NS37 354 aa21.2■□□□□ 0.98
CHMP2B-205ENST00000494980 C4AP0C0L4 1744 aa21.2■□□□□ 0.98
CHMP2B-205ENST00000494980 USP31Q70CQ4 1352 aa21.2■□□□□ 0.98
CHMP2B-205ENST00000494980 CCDC85CA6NKD9 419 aa21.19■□□□□ 0.98
CHMP2B-205ENST00000494980 DCAF5Q96JK2 942 aa21.19■□□□□ 0.98
CHMP2B-205ENST00000494980 MAP2P11137 1827 aaKnown RBP21.18■□□□□ 0.98
CHMP2B-205ENST00000494980 TIAM2Q8IVF5 1701 aa21.18■□□□□ 0.98
CHMP2B-205ENST00000494980 NBPF1Q3BBV0 1214 aa21.17■□□□□ 0.98
CHMP2B-205ENST00000494980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.17■□□□□ 0.982e-7■■■■□ 24.8
CHMP2B-205ENST00000494980 CNTNAP1P78357 1384 aa21.17■□□□□ 0.98
CHMP2B-205ENST00000494980 VIRMAQ69YN4 1812 aaKnown RBP21.17■□□□□ 0.98
CHMP2B-205ENST00000494980 KCNA3P22001 575 aa21.16■□□□□ 0.98
CHMP2B-205ENST00000494980 ZC3H4Q9UPT8 1303 aaKnown RBP21.15■□□□□ 0.98
CHMP2B-205ENST00000494980 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
CHMP2B-205ENST00000494980 NME9Q86XW9 330 aa21.15■□□□□ 0.98
CHMP2B-205ENST00000494980 CCDC87Q9NVE4 849 aa21.15■□□□□ 0.98
CHMP2B-205ENST00000494980 GNPATO15228 680 aa21.14■□□□□ 0.97
CHMP2B-205ENST00000494980 DALRD3Q5D0E6 543 aaKnown RBP21.14■□□□□ 0.97
CHMP2B-205ENST00000494980 LINC00116Q8NCU8 138 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms