RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 RNF20Q5VTR2 975 aa9.48□□□□□ -0.89
SRRM1-218ENST00000494934 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
SRRM1-218ENST00000494934 AVPP01185 164 aa9.47□□□□□ -0.89
SRRM1-218ENST00000494934 ADD1P35611 737 aaKnown RBP9.47□□□□□ -0.89
SRRM1-218ENST00000494934 ERVK-9P63128 1117 aa9.47□□□□□ -0.89
SRRM1-218ENST00000494934 NCOA4Q13772 614 aa9.47□□□□□ -0.89
SRRM1-218ENST00000494934 ELOAQ14241 798 aaKnown RBP9.47□□□□□ -0.89
SRRM1-218ENST00000494934 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
SRRM1-218ENST00000494934 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
SRRM1-218ENST00000494934 PCDHB11Q9Y5F2 797 aa9.47□□□□□ -0.89
SRRM1-218ENST00000494934 MFAP1P55081 439 aaKnown RBP9.46□□□□□ -0.9
SRRM1-218ENST00000494934 MAP7D1Q3KQU3 841 aa9.46□□□□□ -0.9
SRRM1-218ENST00000494934 KDF1Q8NAX2 398 aaPredicted RBP9.46□□□□□ -0.9
SRRM1-218ENST00000494934 SLAIN2Q9P270 581 aa9.46□□□□□ -0.9
SRRM1-218ENST00000494934 NOVA2Q9UNW9 492 aaKnown RBP9.46□□□□□ -0.9
SRRM1-218ENST00000494934 DOLKQ9UPQ8 538 aa9.46□□□□□ -0.9
SRRM1-218ENST00000494934 IVNS1ABPQ9Y6Y0 642 aa9.46□□□□□ -0.9
SRRM1-218ENST00000494934 FAM187AA6NFU0 413 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L15C9J2P7 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L10C9JJH3 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L13C9JLJ4 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L12C9JPN9 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L11C9JVI0 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L21D6R901 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L18D6R9N7 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L22D6RA61 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L17D6RBQ6 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L19D6RCP7 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L20D6RJB6 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
SRRM1-218ENST00000494934 USP17L24Q0WX57 530 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 CCDC125Q86Z20 511 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 RGS22Q8NE09 1264 aa9.45□□□□□ -0.9
SRRM1-218ENST00000494934 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
SRRM1-218ENST00000494934 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
SRRM1-218ENST00000494934 LCE2BO14633 110 aa9.44□□□□□ -0.9
SRRM1-218ENST00000494934 OSBPL3Q9H4L5 887 aa9.44□□□□□ -0.9
SRRM1-218ENST00000494934 CYLDQ9NQC7 956 aa9.44□□□□□ -0.9
SRRM1-218ENST00000494934 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
SRRM1-218ENST00000494934 DGAT1O75907 488 aa9.43□□□□□ -0.9
SRRM1-218ENST00000494934 ZIC2O95409 532 aaPredicted RBP9.43□□□□□ -0.9
SRRM1-218ENST00000494934 WDR4P57081 412 aaKnown RBP9.43□□□□□ -0.9
SRRM1-218ENST00000494934 CBLBQ13191 982 aa9.43□□□□□ -0.9
SRRM1-218ENST00000494934 PTK7Q13308 1070 aa9.43□□□□□ -0.9
SRRM1-218ENST00000494934 Q6ZVU0 165 aa9.43□□□□□ -0.9
SRRM1-218ENST00000494934 PATL2C9JE40 543 aaKnown RBP9.42□□□□□ -0.9
SRRM1-218ENST00000494934 OXLD1Q5BKU9 147 aa9.42□□□□□ -0.9
SRRM1-218ENST00000494934 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
SRRM1-218ENST00000494934 PHLDB3Q6NSJ2 640 aa9.42□□□□□ -0.9
SRRM1-218ENST00000494934 MTMR7Q9Y216 660 aa9.42□□□□□ -0.9
SRRM1-218ENST00000494934 PCDHGA11Q9Y5H2 935 aa9.42□□□□□ -0.9
SRRM1-218ENST00000494934 DKK1O94907 266 aa9.41□□□□□ -0.9
SRRM1-218ENST00000494934 RANGAP1P46060 587 aaPredicted RBP9.41□□□□□ -0.9
SRRM1-218ENST00000494934 IRX2Q9BZI1 471 aaPredicted RBP9.41□□□□□ -0.9
SRRM1-218ENST00000494934 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.9
SRRM1-218ENST00000494934 LZTS3O60299 673 aaPredicted RBP9.4□□□□□ -0.9
SRRM1-218ENST00000494934 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
SRRM1-218ENST00000494934 CLDN10P78369 228 aa9.4□□□□□ -0.9
SRRM1-218ENST00000494934 MYT1Q01538 1121 aa9.4□□□□□ -0.9
SRRM1-218ENST00000494934 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.9
SRRM1-218ENST00000494934 PGPEP1Q9NXJ5 209 aa9.4□□□□□ -0.9
SRRM1-218ENST00000494934 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
SRRM1-218ENST00000494934 STAU1O95793 577 aaKnown RBP9.39□□□□□ -0.91
SRRM1-218ENST00000494934 RASA1P20936 1047 aa9.39□□□□□ -0.91
SRRM1-218ENST00000494934 LAPTM4AQ15012 233 aa9.39□□□□□ -0.91
SRRM1-218ENST00000494934 EML3Q32P44 896 aa9.39□□□□□ -0.91
SRRM1-218ENST00000494934 CRIPAKQ8N1N5 446 aa9.39□□□□□ -0.91
SRRM1-218ENST00000494934 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
SRRM1-218ENST00000494934 USP4Q13107 963 aa9.38□□□□□ -0.91
SRRM1-218ENST00000494934 FOXD4L5Q5VV16 416 aaPredicted RBP9.38□□□□□ -0.91
SRRM1-218ENST00000494934 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
SRRM1-218ENST00000494934 FOXD4L4Q8WXT5 416 aaPredicted RBP9.38□□□□□ -0.91
SRRM1-218ENST00000494934 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
SRRM1-218ENST00000494934 PKDCCQ504Y2 493 aa9.37□□□□□ -0.91
SRRM1-218ENST00000494934 OGFOD1Q8N543 542 aa9.37□□□□□ -0.91
SRRM1-218ENST00000494934 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
SRRM1-218ENST00000494934 AGBL1Q96MI9 1066 aa9.37□□□□□ -0.91
SRRM1-218ENST00000494934 DACH1Q9UI36 760 aa9.37□□□□□ -0.91
SRRM1-218ENST00000494934 GNEQ9Y223 722 aaKnown RBP9.37□□□□□ -0.91
SRRM1-218ENST00000494934 ST8SIA5O15466 376 aa9.36□□□□□ -0.91
SRRM1-218ENST00000494934 ADH1AP07327 375 aa9.36□□□□□ -0.91
SRRM1-218ENST00000494934 DPYDQ12882 1025 aa9.36□□□□□ -0.91
SRRM1-218ENST00000494934 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
SRRM1-218ENST00000494934 SND1Q7KZF4 910 aaKnown RBP eCLIP9.36□□□□□ -0.91
SRRM1-218ENST00000494934 TRIM46Q7Z4K8 759 aa9.36□□□□□ -0.91
SRRM1-218ENST00000494934 ANKMY2Q8IV38 441 aa9.36□□□□□ -0.91
SRRM1-218ENST00000494934 AAASQ9NRG9 546 aa9.36□□□□□ -0.91
SRRM1-218ENST00000494934 NOD1Q9Y239 953 aa9.36□□□□□ -0.91
SRRM1-218ENST00000494934 SCNN1DP51172 638 aa9.35□□□□□ -0.91
SRRM1-218ENST00000494934 GTF2IP78347 998 aa9.35□□□□□ -0.91
SRRM1-218ENST00000494934 TXNDC2Q86VQ3 553 aa9.35□□□□□ -0.91
SRRM1-218ENST00000494934 SSFA2P28290 1259 aa9.34□□□□□ -0.91
SRRM1-218ENST00000494934 CTC1Q2NKJ3 1217 aa9.34□□□□□ -0.91
SRRM1-218ENST00000494934 CLP1Q92989 425 aaKnown RBP9.34□□□□□ -0.91
SRRM1-218ENST00000494934 ZNF428Q96B54 188 aa9.34□□□□□ -0.91
SRRM1-218ENST00000494934 TMEM229AB2RXF0 380 aa9.33□□□□□ -0.92
SRRM1-218ENST00000494934 MYCP01106 439 aaPredicted RBP9.33□□□□□ -0.92
SRRM1-218ENST00000494934 SCNN1AP37088 669 aa9.33□□□□□ -0.92
SRRM1-218ENST00000494934 B4GALNT3Q6L9W6 998 aa9.33□□□□□ -0.92
SRRM1-218ENST00000494934 FAM200AQ8TCP9 573 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms