RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 TRIM37O94972 964 aa21.9■■□□□ 1.1
YIF1A-209ENST00000494836 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
YIF1A-209ENST00000494836 DIAPH1O60610 1272 aaKnown RBP21.89■■□□□ 1.09
YIF1A-209ENST00000494836 DDX54Q8TDD1 881 aaKnown RBP21.89■■□□□ 1.09
YIF1A-209ENST00000494836 PKD1L3Q7Z443 1732 aa21.89■■□□□ 1.09
YIF1A-209ENST00000494836 SBF2Q86WG5 1849 aa21.88■■□□□ 1.09
YIF1A-209ENST00000494836 CFAP53Q96M91 514 aa21.88■■□□□ 1.09
YIF1A-209ENST00000494836 PLEKHG2Q9H7P9 1386 aa21.87■■□□□ 1.09
YIF1A-209ENST00000494836 PCDH11XQ9BZA7 1347 aa21.86■■□□□ 1.09
YIF1A-209ENST00000494836 PCDH11YQ9BZA8 1340 aa21.86■■□□□ 1.09
YIF1A-209ENST00000494836 BAG6P46379 1132 aa21.85■■□□□ 1.09
YIF1A-209ENST00000494836 RALBP1Q15311 655 aa21.85■■□□□ 1.09
YIF1A-209ENST00000494836 SULT6B1Q6IMI4 303 aa21.85■■□□□ 1.09
YIF1A-209ENST00000494836 AEBP1Q8IUX7 1158 aa21.85■■□□□ 1.09
YIF1A-209ENST00000494836 KDRP35968 1356 aa21.85■■□□□ 1.09
YIF1A-209ENST00000494836 DEFB132Q7Z7B7 95 aa21.84■■□□□ 1.09
YIF1A-209ENST00000494836 SPG7Q9UQ90 795 aa21.84■■□□□ 1.09
YIF1A-209ENST00000494836 NHSQ6T4R5 1651 aa21.83■■□□□ 1.09
YIF1A-209ENST00000494836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.83■■□□□ 1.09
YIF1A-209ENST00000494836 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
YIF1A-209ENST00000494836 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
YIF1A-209ENST00000494836 APBA3O96018 575 aa21.81■■□□□ 1.08
YIF1A-209ENST00000494836 ACSBG1Q96GR2 724 aa21.81■■□□□ 1.08
YIF1A-209ENST00000494836 DOT1LQ8TEK3 1739 aa21.8■■□□□ 1.08
YIF1A-209ENST00000494836 CYP27B1O15528 508 aa21.8■■□□□ 1.08
YIF1A-209ENST00000494836 HMOX1P09601 288 aa21.79■■□□□ 1.08
YIF1A-209ENST00000494836 KCNQ2O43526 872 aa21.78■■□□□ 1.08
YIF1A-209ENST00000494836 EN1Q05925 392 aaPredicted RBP21.78■■□□□ 1.08
YIF1A-209ENST00000494836 PLEKHO1Q53GL0 409 aaPredicted RBP21.78■■□□□ 1.08
YIF1A-209ENST00000494836 PTF1AQ7RTS3 328 aa21.78■■□□□ 1.08
YIF1A-209ENST00000494836 NUDCQ9Y266 331 aa21.78■■□□□ 1.08
YIF1A-209ENST00000494836 MYBBP1AQ9BQG0 1328 aaKnown RBP21.78■■□□□ 1.08
YIF1A-209ENST00000494836 AMOTQ4VCS5 1084 aa21.77■■□□□ 1.08
YIF1A-209ENST00000494836 KAT6BQ8WYB5 2073 aa21.76■■□□□ 1.07
YIF1A-209ENST00000494836 IFNL2Q8IZJ0 200 aa21.76■■□□□ 1.07
YIF1A-209ENST00000494836 RGPD3A6NKT7 1758 aaPredicted RBP21.75■■□□□ 1.07
YIF1A-209ENST00000494836 RGPD4Q7Z3J3 1758 aa21.75■■□□□ 1.07
YIF1A-209ENST00000494836 PHKG2P15735 406 aa21.75■■□□□ 1.07
YIF1A-209ENST00000494836 SYTL4Q96C24 671 aaPredicted RBP21.75■■□□□ 1.07
YIF1A-209ENST00000494836 PRKRIP1Q9H875 184 aaPredicted RBP21.75■■□□□ 1.07
YIF1A-209ENST00000494836 BTAF1O14981 1849 aa21.74■■□□□ 1.07
YIF1A-209ENST00000494836 ZNF530Q6P9A1 599 aaPredicted RBP21.74■■□□□ 1.07
YIF1A-209ENST00000494836 CAMKK2Q96RR4 588 aa21.74■■□□□ 1.07
YIF1A-209ENST00000494836 TOGARAM1Q9Y4F4 1720 aa21.73■■□□□ 1.07
YIF1A-209ENST00000494836 PRIM1P49642 420 aaKnown RBP21.73■■□□□ 1.07
YIF1A-209ENST00000494836 NKX1-1Q15270 411 aaPredicted RBP21.73■■□□□ 1.07
YIF1A-209ENST00000494836 EZH2Q15910 746 aaKnown RBP21.73■■□□□ 1.07
YIF1A-209ENST00000494836 PLSCR1O15162 318 aa21.72■■□□□ 1.07
YIF1A-209ENST00000494836 U2AF1L5P0DN76 240 aaPredicted RBP21.72■■□□□ 1.07
YIF1A-209ENST00000494836 U2AF1Q01081 240 aaKnown RBP eCLIP21.72■■□□□ 1.07
YIF1A-209ENST00000494836 RREB1Q92766 1687 aa21.71■■□□□ 1.07
YIF1A-209ENST00000494836 HSP90AB1P08238 724 aaKnown RBP21.7■■□□□ 1.06
YIF1A-209ENST00000494836 C1orf141Q5JVX7 400 aa21.7■■□□□ 1.06
YIF1A-209ENST00000494836 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
YIF1A-209ENST00000494836 ITGB4P16144 1822 aa21.67■■□□□ 1.06
YIF1A-209ENST00000494836 PRKAR2BP31323 418 aa21.67■■□□□ 1.06
YIF1A-209ENST00000494836 DCAF5Q96JK2 942 aa21.67■■□□□ 1.06
YIF1A-209ENST00000494836 NUP188Q5SRE5 1749 aa21.66■■□□□ 1.06
YIF1A-209ENST00000494836 FCHSD2O94868 740 aa21.66■■□□□ 1.06
YIF1A-209ENST00000494836 MPRIPQ6WCQ1 1025 aa21.66■■□□□ 1.06
YIF1A-209ENST00000494836 KDM6AO15550 1401 aaPredicted RBP21.65■■□□□ 1.06
YIF1A-209ENST00000494836 MTHFSDQ2M296 383 aaKnown RBP21.65■■□□□ 1.06
YIF1A-209ENST00000494836 AKAP4Q5JQC9 854 aa21.65■■□□□ 1.06
YIF1A-209ENST00000494836 TMOD3Q9NYL9 352 aa21.64■■□□□ 1.05
YIF1A-209ENST00000494836 ANP32CO43423 234 aa21.63■■□□□ 1.05
YIF1A-209ENST00000494836 TXNRD1Q16881 649 aa21.63■■□□□ 1.05
YIF1A-209ENST00000494836 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
YIF1A-209ENST00000494836 ERVV-2B6SEH9 535 aa21.62■■□□□ 1.05
YIF1A-209ENST00000494836 PROM2Q8N271 834 aa21.61■■□□□ 1.05
YIF1A-209ENST00000494836 PIGBQ92521 554 aa21.61■■□□□ 1.05
YIF1A-209ENST00000494836 PHACTR3Q96KR7 559 aa21.61■■□□□ 1.05
YIF1A-209ENST00000494836 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
YIF1A-209ENST00000494836 LY75O60449 1722 aa21.6■■□□□ 1.05
YIF1A-209ENST00000494836 MAP3K5Q99683 1374 aa21.6■■□□□ 1.05
YIF1A-209ENST00000494836 NEFMP07197 916 aa21.59■■□□□ 1.05
YIF1A-209ENST00000494836 PALLDQ8WX93 1383 aa21.59■■□□□ 1.05
YIF1A-209ENST00000494836 CABP4P57796 275 aa21.58■■□□□ 1.05
YIF1A-209ENST00000494836 NBPF14Q5TI25 921 aa21.58■■□□□ 1.05
YIF1A-209ENST00000494836 SMARCC1Q92922 1105 aaPredicted RBP21.58■■□□□ 1.05
YIF1A-209ENST00000494836 PNNQ9H307 717 aaKnown RBP21.58■■□□□ 1.05
YIF1A-209ENST00000494836 ADAMTS7Q9UKP4 1686 aa21.58■■□□□ 1.05
YIF1A-209ENST00000494836 WDR43Q15061 677 aaKnown RBP eCLIP21.57■■□□□ 1.04
YIF1A-209ENST00000494836 SLC27A3Q5K4L6 730 aa21.57■■□□□ 1.04
YIF1A-209ENST00000494836 VIRMAQ69YN4 1812 aaKnown RBP21.57■■□□□ 1.04
YIF1A-209ENST00000494836 GNAT3A8MTJ3 354 aa21.56■■□□□ 1.04
YIF1A-209ENST00000494836 RNMTO43148 476 aaKnown RBP21.56■■□□□ 1.04
YIF1A-209ENST00000494836 MRC1P22897 1456 aa21.56■■□□□ 1.04
YIF1A-209ENST00000494836 LGR6Q9HBX8 967 aa21.55■■□□□ 1.04
YIF1A-209ENST00000494836 CCNL1Q9UK58 526 aaPredicted RBP21.55■■□□□ 1.04
YIF1A-209ENST00000494836 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
YIF1A-209ENST00000494836 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
YIF1A-209ENST00000494836 R3HDM1Q15032 1099 aaKnown RBP21.54■■□□□ 1.04
YIF1A-209ENST00000494836 NFATC2IPQ8NCF5 419 aa21.54■■□□□ 1.04
YIF1A-209ENST00000494836 PLEKHF1Q96S99 279 aa21.54■■□□□ 1.04
YIF1A-209ENST00000494836 LRRC4BQ9NT99 713 aa21.54■■□□□ 1.04
YIF1A-209ENST00000494836 ASAP1Q9ULH1 1129 aa21.54■■□□□ 1.04
YIF1A-209ENST00000494836 PSDA5PKW4 1024 aaPredicted RBP21.53■■□□□ 1.04
YIF1A-209ENST00000494836 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
YIF1A-209ENST00000494836 ANO8Q9HCE9 1232 aaPredicted RBP21.53■■□□□ 1.04
YIF1A-209ENST00000494836 ATG3Q9NT62 314 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms