RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, human

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KATNA1-208	ENST00000494504	MRPL50	Q8N5N7	158 aa	Known RBP	11	□□□□□ -0.65
KATNA1-208	ENST00000494504	PLCH1	Q4KWH8	1693 aa		11	□□□□□ -0.65
KATNA1-208	ENST00000494504	TNS1	Q9HBL0	1735 aa	Known RBP	11	□□□□□ -0.65
KATNA1-208	ENST00000494504		E9PCH4	1651 aa		10.99	□□□□□ -0.65
KATNA1-208	ENST00000494504	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.99	□□□□□ -0.65
KATNA1-208	ENST00000494504	MAP3K9	P80192	1104 aa		10.99	□□□□□ -0.65
KATNA1-208	ENST00000494504	THSD4	Q6ZMP0	1018 aa		10.99	□□□□□ -0.65
KATNA1-208	ENST00000494504	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.99	□□□□□ -0.65
KATNA1-208	ENST00000494504	PARD3	Q8TEW0	1356 aa		10.99	□□□□□ -0.65
KATNA1-208	ENST00000494504	GTPBP6	O43824	516 aa	Predicted RBP	10.98	□□□□□ -0.65
KATNA1-208	ENST00000494504	FAM50A	Q14320	339 aa	Known RBP	10.98	□□□□□ -0.65
KATNA1-208	ENST00000494504	WAPL	Q7Z5K2	1190 aa		10.98	□□□□□ -0.65
KATNA1-208	ENST00000494504	WNT2B	Q93097	391 aa		10.98	□□□□□ -0.65
KATNA1-208	ENST00000494504	NBPF3	Q9H094	633 aa		10.98	□□□□□ -0.65
KATNA1-208	ENST00000494504	PSME1	Q06323	249 aa		10.97	□□□□□ -0.65
KATNA1-208	ENST00000494504	ADAM33	Q9BZ11	813 aa		10.97	□□□□□ -0.65
KATNA1-208	ENST00000494504	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.97	□□□□□ -0.65
KATNA1-208	ENST00000494504	STK26	Q9P289	416 aa		10.97	□□□□□ -0.65
KATNA1-208	ENST00000494504	SPATA31A5	Q5VU36	1347 aa		10.97	□□□□□ -0.65
KATNA1-208	ENST00000494504	SPATA31A7	Q8IWB4	1347 aa		10.97	□□□□□ -0.65
KATNA1-208	ENST00000494504	HFM1	A2PYH4	1435 aa		10.97	□□□□□ -0.65
KATNA1-208	ENST00000494504	ADGRB2	O60241	1585 aa		10.97	□□□□□ -0.65
KATNA1-208	ENST00000494504	NWD2	Q9ULI1	1742 aa		10.96	□□□□□ -0.65
KATNA1-208	ENST00000494504	CCDC144A	A2RUR9	1427 aa		10.96	□□□□□ -0.65
KATNA1-208	ENST00000494504	NAIP	Q13075	1403 aa		10.96	□□□□□ -0.65
KATNA1-208	ENST00000494504	TNS3	Q68CZ2	1445 aa		10.96	□□□□□ -0.65
KATNA1-208	ENST00000494504	SYT17	Q9BSW7	474 aa		10.96	□□□□□ -0.65
KATNA1-208	ENST00000494504	NUP155	O75694	1391 aa		10.95	□□□□□ -0.66
KATNA1-208	ENST00000494504	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.95	□□□□□ -0.66
KATNA1-208	ENST00000494504	USP35	Q9P2H5	1018 aa		10.95	□□□□□ -0.66
KATNA1-208	ENST00000494504	NRK	Q7Z2Y5	1582 aa		10.94	□□□□□ -0.66
KATNA1-208	ENST00000494504	PDE3B	Q13370	1112 aa		10.94	□□□□□ -0.66
KATNA1-208	ENST00000494504	MFSD10	Q14728	455 aa		10.94	□□□□□ -0.66
KATNA1-208	ENST00000494504	STRN4	Q9NRL3	753 aa		10.94	□□□□□ -0.66
KATNA1-208	ENST00000494504	NUP188	Q5SRE5	1749 aa		10.94	□□□□□ -0.66
KATNA1-208	ENST00000494504	GPR162	Q16538	588 aa		10.93	□□□□□ -0.66
KATNA1-208	ENST00000494504	BBX	Q8WY36	941 aa	Predicted RBP	10.93	□□□□□ -0.66
KATNA1-208	ENST00000494504	IQGAP3	Q86VI3	1631 aa		10.93	□□□□□ -0.66
KATNA1-208	ENST00000494504	CDC42BPG	Q6DT37	1551 aa		10.92	□□□□□ -0.66
KATNA1-208	ENST00000494504	NEXMIF	Q5QGS0	1516 aa		10.92	□□□□□ -0.66
KATNA1-208	ENST00000494504	VPS8	Q8N3P4	1428 aa		10.92	□□□□□ -0.66
KATNA1-208	ENST00000494504	RREB1	Q92766	1687 aa		10.92	□□□□□ -0.66
KATNA1-208	ENST00000494504	PPP1R3G	B7ZBB8	358 aa		10.91	□□□□□ -0.66
KATNA1-208	ENST00000494504	RGS20	O76081	388 aa		10.91	□□□□□ -0.66
KATNA1-208	ENST00000494504	ARHGEF10	O15013	1369 aa		10.9	□□□□□ -0.66
KATNA1-208	ENST00000494504	PLEKHH1	Q9ULM0	1364 aa		10.9	□□□□□ -0.66
KATNA1-208	ENST00000494504	SPATA31A1	Q5TZJ5	1347 aa		10.9	□□□□□ -0.66
KATNA1-208	ENST00000494504	NRAP	Q86VF7	1730 aa		10.9	□□□□□ -0.66
KATNA1-208	ENST00000494504	MYOM1	P52179	1685 aa		10.9	□□□□□ -0.66
KATNA1-208	ENST00000494504	PMFBP1	Q8TBY8	1022 aa		10.9	□□□□□ -0.66
KATNA1-208	ENST00000494504	PRDM11	Q9NQV5	511 aa		10.9	□□□□□ -0.66
KATNA1-208	ENST00000494504	EMILIN3	Q9NT22	766 aa		10.9	□□□□□ -0.66
KATNA1-208	ENST00000494504	CHD4	Q14839	1912 aa		10.9	□□□□□ -0.67
KATNA1-208	ENST00000494504	THSD7A	Q9UPZ6	1657 aa		10.89	□□□□□ -0.67
KATNA1-208	ENST00000494504	CHRNA2	Q15822	529 aa		10.89	□□□□□ -0.67
KATNA1-208	ENST00000494504	PCDHGA10	Q9Y5H3	936 aa		10.89	□□□□□ -0.67
KATNA1-208	ENST00000494504	SBNO1	A3KN83	1393 aa		10.89	□□□□□ -0.67
KATNA1-208	ENST00000494504	FBXW7	Q969H0	707 aa		10.88	□□□□□ -0.67
KATNA1-208	ENST00000494504	RABGEF1	Q9UJ41	708 aa		10.87	□□□□□ -0.67
KATNA1-208	ENST00000494504	ABCA3	Q99758	1704 aa		10.87	□□□□□ -0.67
KATNA1-208	ENST00000494504	TECPR2	O15040	1411 aa		10.86	□□□□□ -0.67
KATNA1-208	ENST00000494504	PRAG1	Q86YV5	1406 aa		10.86	□□□□□ -0.67
KATNA1-208	ENST00000494504	HSPA6	P17066	643 aa		10.86	□□□□□ -0.67
KATNA1-208	ENST00000494504	TMEM132E	Q6IEE7	984 aa		10.86	□□□□□ -0.67
KATNA1-208	ENST00000494504	TYW1B	Q6NUM6	668 aa		10.86	□□□□□ -0.67
KATNA1-208	ENST00000494504	ANKK1	Q8NFD2	765 aa		10.86	□□□□□ -0.67
KATNA1-208	ENST00000494504	PHF14	O94880	888 aa		10.85	□□□□□ -0.67
KATNA1-208	ENST00000494504	EVA1C	P58658	441 aa		10.85	□□□□□ -0.67
KATNA1-208	ENST00000494504	PROX2	Q3B8N5	592 aa		10.85	□□□□□ -0.67
KATNA1-208	ENST00000494504	PTF1A	Q7RTS3	328 aa		10.85	□□□□□ -0.67
KATNA1-208	ENST00000494504	ARX	Q96QS3	562 aa		10.85	□□□□□ -0.67
KATNA1-208	ENST00000494504	KIF1A	Q12756	1690 aa		10.85	□□□□□ -0.67
KATNA1-208	ENST00000494504	COL14A1	Q05707	1796 aa	Known RBP	10.85	□□□□□ -0.67
KATNA1-208	ENST00000494504	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
KATNA1-208	ENST00000494504	STK32B	Q9NY57	414 aa		10.84	□□□□□ -0.67
KATNA1-208	ENST00000494504	CLTCL1	P53675	1640 aa		10.84	□□□□□ -0.67
KATNA1-208	ENST00000494504	RRBP1	Q9P2E9	1410 aa	Known RBP	10.84	□□□□□ -0.67
KATNA1-208	ENST00000494504	CASZ1	Q86V15	1759 aa		10.83	□□□□□ -0.68
KATNA1-208	ENST00000494504	COL9A1	P20849	921 aa		10.83	□□□□□ -0.68
KATNA1-208	ENST00000494504	ITGAE	P38570	1179 aa		10.83	□□□□□ -0.68
KATNA1-208	ENST00000494504	ZC3H6	P61129	1189 aa	Known RBP	10.83	□□□□□ -0.68
KATNA1-208	ENST00000494504	MTFR1L	Q9H019	292 aa		10.83	□□□□□ -0.68
KATNA1-208	ENST00000494504	DLC1	Q96QB1	1528 aa		10.83	□□□□□ -0.68
KATNA1-208	ENST00000494504	KIAA0232	Q92628	1395 aa		10.82	□□□□□ -0.68
KATNA1-208	ENST00000494504	FMN2	Q9NZ56	1722 aa		10.82	□□□□□ -0.68
KATNA1-208	ENST00000494504	PLSCR1	O15162	318 aa		10.82	□□□□□ -0.68
KATNA1-208	ENST00000494504	LARP1	Q6PKG0	1096 aa	Known RBP	10.82	□□□□□ -0.68
KATNA1-208	ENST00000494504	ZNF526	Q8TF50	670 aa	Predicted RBP	10.82	□□□□□ -0.68
KATNA1-208	ENST00000494504	NRXN1	Q9ULB1	1477 aa		10.81	□□□□□ -0.68
KATNA1-208	ENST00000494504	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.81	□□□□□ -0.68
KATNA1-208	ENST00000494504	BARGIN	Q6ZT62	677 aa		10.81	□□□□□ -0.68
KATNA1-208	ENST00000494504	LAPTM4B	Q86VI4	370 aa		10.81	□□□□□ -0.68
KATNA1-208	ENST00000494504	IRX2	Q9BZI1	471 aa	Predicted RBP	10.81	□□□□□ -0.68
KATNA1-208	ENST00000494504	SLC15A2	Q16348	729 aa		10.8	□□□□□ -0.68
KATNA1-208	ENST00000494504	TCP11L2	Q8N4U5	519 aa		10.8	□□□□□ -0.68
KATNA1-208	ENST00000494504	SPRYD3	Q8NCJ5	442 aa		10.8	□□□□□ -0.68
KATNA1-208	ENST00000494504	SHANK3	Q9BYB0	1731 aa		10.8	□□□□□ -0.68
KATNA1-208	ENST00000494504	RPGRIP1L	Q68CZ1	1315 aa		10.8	□□□□□ -0.68
KATNA1-208	ENST00000494504	ADGRF5	Q8IZF2	1346 aa		10.8	□□□□□ -0.68
KATNA1-208	ENST00000494504	RGPD8	O14715	1765 aa	Predicted RBP	10.8	□□□□□ -0.68

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