RNA–Protein interactions for RNA: ENST00000494445.1

EIF4A2-223, Transcript of eukaryotic translation initiation factor 4A2, human

TSL 2

Gene EIF4A2, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A2-223	ENST00000494445	C1QTNF8	P60827	252 aa		12.75	□□□□□ -0.37
EIF4A2-223	ENST00000494445	SLC16A10	Q8TF71	515 aa		12.75	□□□□□ -0.37
EIF4A2-223	ENST00000494445	IP6K1	Q92551	441 aa		12.75	□□□□□ -0.37
EIF4A2-223	ENST00000494445	CARD11	Q9BXL7	1154 aa		12.75	□□□□□ -0.37
EIF4A2-223	ENST00000494445	ANKRD36B	Q8N2N9	1353 aa		12.74	□□□□□ -0.37
EIF4A2-223	ENST00000494445	SENP3-EIF4A1	A0A087X0R7	540 aa		12.74	□□□□□ -0.37
EIF4A2-223	ENST00000494445	DDX54	Q8TDD1	881 aa	Known RBP	12.74	□□□□□ -0.37
EIF4A2-223	ENST00000494445	KAT6B	Q8WYB5	2073 aa		12.74	□□□□□ -0.37
EIF4A2-223	ENST00000494445	RGPD2	P0DJD1	1756 aa		12.74	□□□□□ -0.37
EIF4A2-223	ENST00000494445	GPR162	Q16538	588 aa		12.73	□□□□□ -0.37
EIF4A2-223	ENST00000494445	LTV1	Q96GA3	475 aa	Predicted RBP	12.73	□□□□□ -0.37
EIF4A2-223	ENST00000494445	TERF2IP	Q9NYB0	399 aa		12.73	□□□□□ -0.37
EIF4A2-223	ENST00000494445	MEGF6	O75095	1541 aa		12.72	□□□□□ -0.37
EIF4A2-223	ENST00000494445	POLD1	P28340	1107 aa		12.72	□□□□□ -0.37
EIF4A2-223	ENST00000494445	KCNQ4	P56696	695 aa		12.72	□□□□□ -0.37
EIF4A2-223	ENST00000494445	KLHL34	Q8N239	644 aa		12.72	□□□□□ -0.37
EIF4A2-223	ENST00000494445	PUS7	Q96PZ0	661 aa	Known RBP	12.72	□□□□□ -0.37
EIF4A2-223	ENST00000494445	MAP3K19	Q56UN5	1328 aa		12.71	□□□□□ -0.37
EIF4A2-223	ENST00000494445	PRIM1	P49642	420 aa	Known RBP	12.71	□□□□□ -0.37
EIF4A2-223	ENST00000494445	NLGN2	Q8NFZ4	835 aa		12.71	□□□□□ -0.37
EIF4A2-223	ENST00000494445	TFCP2L1	Q9NZI6	479 aa		12.71	□□□□□ -0.37
EIF4A2-223	ENST00000494445	HOXC9	P31274	260 aa		12.7	□□□□□ -0.38
EIF4A2-223	ENST00000494445	SYTL4	Q96C24	671 aa	Predicted RBP	12.7	□□□□□ -0.38
EIF4A2-223	ENST00000494445	PELP1	Q8IZL8	1130 aa	Known RBP	12.69	□□□□□ -0.38
EIF4A2-223	ENST00000494445	RTL1	A6NKG5	1358 aa		12.69	□□□□□ -0.38
EIF4A2-223	ENST00000494445	GIGYF1	O75420	1035 aa	Predicted RBP	12.68	□□□□□ -0.38
EIF4A2-223	ENST00000494445	FBLN1	P23142	703 aa		12.68	□□□□□ -0.38
EIF4A2-223	ENST00000494445	ZCRB1	Q8TBF4	217 aa	Known RBP	12.68	□□□□□ -0.38
EIF4A2-223	ENST00000494445	COG3	Q96JB2	828 aa		12.68	□□□□□ -0.38
EIF4A2-223	ENST00000494445	C5	P01031	1676 aa		12.67	□□□□□ -0.38
EIF4A2-223	ENST00000494445	TESK2	Q96S53	571 aa		12.67	□□□□□ -0.38
EIF4A2-223	ENST00000494445	CCNL1	Q9UK58	526 aa	Predicted RBP	12.67	□□□□□ -0.38
EIF4A2-223	ENST00000494445	YBX3	P16989	372 aa	Known RBP eCLIP	12.66	□□□□□ -0.38	2e-29	■□□□□ 9
EIF4A2-223	ENST00000494445	AMPH	P49418	695 aa		12.66	□□□□□ -0.38
EIF4A2-223	ENST00000494445	COL23A1	Q86Y22	540 aa	Predicted RBP	12.66	□□□□□ -0.38
EIF4A2-223	ENST00000494445	USP47	Q96K76	1375 aa		12.66	□□□□□ -0.38
EIF4A2-223	ENST00000494445	TONSL	Q96HA7	1378 aa		12.65	□□□□□ -0.38
EIF4A2-223	ENST00000494445	TAF1L	Q8IZX4	1826 aa		12.65	□□□□□ -0.39
EIF4A2-223	ENST00000494445	NBPF6	Q5VWK0	638 aa		12.64	□□□□□ -0.39
EIF4A2-223	ENST00000494445	MSL1	Q68DK7	614 aa		12.64	□□□□□ -0.39
EIF4A2-223	ENST00000494445	USHBP1	Q8N6Y0	703 aa		12.64	□□□□□ -0.39
EIF4A2-223	ENST00000494445	NBPF4	Q96M43	638 aa		12.64	□□□□□ -0.39
EIF4A2-223	ENST00000494445	CGNL1	Q0VF96	1302 aa		12.63	□□□□□ -0.39
EIF4A2-223	ENST00000494445	TOGARAM1	Q9Y4F4	1720 aa		12.63	□□□□□ -0.39
EIF4A2-223	ENST00000494445	ST20-MTHFS	A0A0A6YYL1	179 aa		12.63	□□□□□ -0.39
EIF4A2-223	ENST00000494445	GRIN3B	O60391	1043 aa		12.63	□□□□□ -0.39
EIF4A2-223	ENST00000494445	RRS1	Q15050	365 aa	Known RBP	12.63	□□□□□ -0.39
EIF4A2-223	ENST00000494445	SMG6	Q86US8	1419 aa	Known RBP	12.62	□□□□□ -0.39
EIF4A2-223	ENST00000494445	KIF20B	Q96Q89	1820 aa		12.62	□□□□□ -0.39
EIF4A2-223	ENST00000494445	KCNA4	P22459	653 aa		12.62	□□□□□ -0.39
EIF4A2-223	ENST00000494445	C4B	P0C0L5	1744 aa		12.62	□□□□□ -0.39
EIF4A2-223	ENST00000494445	ATP10D	Q9P241	1426 aa		12.62	□□□□□ -0.39
EIF4A2-223	ENST00000494445	PALLD	Q8WX93	1383 aa		12.61	□□□□□ -0.39
EIF4A2-223	ENST00000494445	FYB1	O15117	783 aa		12.61	□□□□□ -0.39
EIF4A2-223	ENST00000494445	DSG3	P32926	999 aa		12.61	□□□□□ -0.39
EIF4A2-223	ENST00000494445	RAPGEF4	Q8WZA2	1011 aa		12.61	□□□□□ -0.39
EIF4A2-223	ENST00000494445	GGNBP2	Q9H3C7	697 aa		12.61	□□□□□ -0.39
EIF4A2-223	ENST00000494445	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.61	□□□□□ -0.39
EIF4A2-223	ENST00000494445	PKD1L3	Q7Z443	1732 aa		12.61	□□□□□ -0.39
EIF4A2-223	ENST00000494445	PCDH11X	Q9BZA7	1347 aa		12.61	□□□□□ -0.39
EIF4A2-223	ENST00000494445	PCDH11Y	Q9BZA8	1340 aa		12.61	□□□□□ -0.39
EIF4A2-223	ENST00000494445	ITGB4	P16144	1822 aa		12.6	□□□□□ -0.39
EIF4A2-223	ENST00000494445	INSR	P06213	1382 aa		12.6	□□□□□ -0.39
EIF4A2-223	ENST00000494445	TAT	P17735	454 aa	Predicted RBP	12.6	□□□□□ -0.39
EIF4A2-223	ENST00000494445	GOLGB1	Q14789	3259 aa	Known RBP	12.6	□□□□□ -0.39
EIF4A2-223	ENST00000494445	ADCY9	O60503	1353 aa		12.59	□□□□□ -0.39
EIF4A2-223	ENST00000494445	CD2AP	Q9Y5K6	639 aa		12.59	□□□□□ -0.39
EIF4A2-223	ENST00000494445	UBR3	Q6ZT12	1888 aa		12.59	□□□□□ -0.39
EIF4A2-223	ENST00000494445	FLT4	P35916	1363 aa		12.58	□□□□□ -0.4
EIF4A2-223	ENST00000494445	SLC24A1	O60721	1099 aa		12.58	□□□□□ -0.4
EIF4A2-223	ENST00000494445	SLC4A2	P04920	1241 aa		12.58	□□□□□ -0.4
EIF4A2-223	ENST00000494445	NCAPD2	Q15021	1401 aa		12.58	□□□□□ -0.4
EIF4A2-223	ENST00000494445	HSP90AB2P	Q58FF8	381 aa		12.58	□□□□□ -0.4
EIF4A2-223	ENST00000494445	AMIGO3	Q86WK7	504 aa		12.58	□□□□□ -0.4
EIF4A2-223	ENST00000494445	FLAD1	Q8NFF5	587 aa		12.58	□□□□□ -0.4
EIF4A2-223	ENST00000494445	MAP2	P11137	1827 aa	Known RBP	12.58	□□□□□ -0.4
EIF4A2-223	ENST00000494445	KIF24	Q5T7B8	1368 aa		12.57	□□□□□ -0.4
EIF4A2-223	ENST00000494445	CYP27B1	O15528	508 aa		12.57	□□□□□ -0.4
EIF4A2-223	ENST00000494445	ANKRD26	Q9UPS8	1709 aa		12.57	□□□□□ -0.4
EIF4A2-223	ENST00000494445	HMGB2	P26583	209 aa	Known RBP	12.56	□□□□□ -0.4
EIF4A2-223	ENST00000494445	IFFO2	Q5TF58	517 aa		12.56	□□□□□ -0.4
EIF4A2-223	ENST00000494445	MPRIP	Q6WCQ1	1025 aa		12.56	□□□□□ -0.4
EIF4A2-223	ENST00000494445	NSD3	Q9BZ95	1437 aa		12.55	□□□□□ -0.4
EIF4A2-223	ENST00000494445	TMF1	P82094	1093 aa		12.55	□□□□□ -0.4
EIF4A2-223	ENST00000494445	SMIM5	Q71RC9	77 aa		12.55	□□□□□ -0.4
EIF4A2-223	ENST00000494445	SMARCC1	Q92922	1105 aa	Predicted RBP	12.55	□□□□□ -0.4
EIF4A2-223	ENST00000494445	AK7	Q96M32	723 aa		12.55	□□□□□ -0.4
EIF4A2-223	ENST00000494445	PHF14	O94880	888 aa		12.54	□□□□□ -0.4
EIF4A2-223	ENST00000494445	PIGB	Q92521	554 aa		12.54	□□□□□ -0.4
EIF4A2-223	ENST00000494445	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.54	□□□□□ -0.4
EIF4A2-223	ENST00000494445	IGSF1	Q8N6C5	1336 aa		12.54	□□□□□ -0.4
EIF4A2-223	ENST00000494445	CIC	Q96RK0	1608 aa	Predicted RBP	12.54	□□□□□ -0.4
EIF4A2-223	ENST00000494445	NKX1-1	Q15270	411 aa	Predicted RBP	12.53	□□□□□ -0.4
EIF4A2-223	ENST00000494445	EMILIN1	Q9Y6C2	1016 aa		12.53	□□□□□ -0.4
EIF4A2-223	ENST00000494445	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.52	□□□□□ -0.41
EIF4A2-223	ENST00000494445	LINC00116	Q8NCU8	138 aa		12.52	□□□□□ -0.41
EIF4A2-223	ENST00000494445	ZNF526	Q8TF50	670 aa	Predicted RBP	12.52	□□□□□ -0.41
EIF4A2-223	ENST00000494445	CARD14	Q9BXL6	1004 aa		12.52	□□□□□ -0.41
EIF4A2-223	ENST00000494445	KIAA1551	Q9HCM1	1747 aa		12.51	□□□□□ -0.41
EIF4A2-223	ENST00000494445	LOC102724428	A0A0B4J2F2	783 aa		12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms