RNA–Protein interactions for RNA: ENST00000494188.1

RAB1A-205, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB1A, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-205ENST00000494188 BAG6P46379 1132 aa30.98■■■□□ 2.55
RAB1A-205ENST00000494188 ZNF316A6NFI3 1004 aaPredicted RBP30.97■■■□□ 2.55
RAB1A-205ENST00000494188 PPP2R1AP30153 589 aa30.97■■■□□ 2.55
RAB1A-205ENST00000494188 PARD3Q8TEW0 1356 aa30.96■■■□□ 2.55
RAB1A-205ENST00000494188 DIAPH1O60610 1272 aaKnown RBP30.96■■■□□ 2.55
RAB1A-205ENST00000494188 COL3A1P02461 1466 aaPredicted RBP30.95■■■□□ 2.54
RAB1A-205ENST00000494188 SBF2Q86WG5 1849 aa30.94■■■□□ 2.54
RAB1A-205ENST00000494188 APBA3O96018 575 aa30.94■■■□□ 2.54
RAB1A-205ENST00000494188 PCDH11XQ9BZA7 1347 aa30.94■■■□□ 2.54
RAB1A-205ENST00000494188 PCDH11YQ9BZA8 1340 aa30.94■■■□□ 2.54
RAB1A-205ENST00000494188 PKD1L3Q7Z443 1732 aa30.93■■■□□ 2.54
RAB1A-205ENST00000494188 AEBP1Q8IUX7 1158 aa30.93■■■□□ 2.54
RAB1A-205ENST00000494188 CFAP53Q96M91 514 aa30.93■■■□□ 2.54
RAB1A-205ENST00000494188 SULT6B1Q6IMI4 303 aa30.92■■■□□ 2.54
RAB1A-205ENST00000494188 ACSBG1Q96GR2 724 aa30.92■■■□□ 2.54
RAB1A-205ENST00000494188 BCL11BQ9C0K0 894 aaPredicted RBP30.91■■■□□ 2.54
RAB1A-205ENST00000494188 SPG7Q9UQ90 795 aa30.91■■■□□ 2.54
RAB1A-205ENST00000494188 EN1Q05925 392 aaPredicted RBP30.9■■■□□ 2.54
RAB1A-205ENST00000494188 NHSQ6T4R5 1651 aa30.9■■■□□ 2.54
RAB1A-205ENST00000494188 PTF1AQ7RTS3 328 aa30.88■■■□□ 2.53
RAB1A-205ENST00000494188 KDRP35968 1356 aa30.87■■■□□ 2.53
RAB1A-205ENST00000494188 PLEKHG2Q9H7P9 1386 aa30.87■■■□□ 2.53
RAB1A-205ENST00000494188 U2SURPO15042 1029 aaKnown RBP30.86■■■□□ 2.53
RAB1A-205ENST00000494188 KCNQ2O43526 872 aa30.86■■■□□ 2.53
RAB1A-205ENST00000494188 RALBP1Q15311 655 aa30.86■■■□□ 2.53
RAB1A-205ENST00000494188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.86■■■□□ 2.53
RAB1A-205ENST00000494188 DOT1LQ8TEK3 1739 aa30.85■■■□□ 2.53
RAB1A-205ENST00000494188 CYP27B1O15528 508 aa30.85■■■□□ 2.53
RAB1A-205ENST00000494188 HMOX1P09601 288 aa30.85■■■□□ 2.53
RAB1A-205ENST00000494188 EZH2Q15910 746 aaKnown RBP30.83■■■□□ 2.53
RAB1A-205ENST00000494188 SYTL4Q96C24 671 aaPredicted RBP30.83■■■□□ 2.53
RAB1A-205ENST00000494188 PLEKHO1Q53GL0 409 aaPredicted RBP30.82■■■□□ 2.52
RAB1A-205ENST00000494188 CAMKK2Q96RR4 588 aa30.8■■■□□ 2.52
RAB1A-205ENST00000494188 NUDCQ9Y266 331 aa30.8■■■□□ 2.52
RAB1A-205ENST00000494188 AMOTQ4VCS5 1084 aa30.79■■■□□ 2.52
RAB1A-205ENST00000494188 IFNL2Q8IZJ0 200 aa30.79■■■□□ 2.52
RAB1A-205ENST00000494188 PHKG2P15735 406 aa30.78■■■□□ 2.52
RAB1A-205ENST00000494188 PRIM1P49642 420 aaKnown RBP30.78■■■□□ 2.52
RAB1A-205ENST00000494188 ZNF530Q6P9A1 599 aaPredicted RBP30.77■■■□□ 2.52
RAB1A-205ENST00000494188 BTAF1O14981 1849 aa30.76■■■□□ 2.51
RAB1A-205ENST00000494188 RGPD3A6NKT7 1758 aaPredicted RBP30.76■■■□□ 2.51
RAB1A-205ENST00000494188 RGPD4Q7Z3J3 1758 aa30.76■■■□□ 2.51
RAB1A-205ENST00000494188 MYBBP1AQ9BQG0 1328 aaKnown RBP30.75■■■□□ 2.51
RAB1A-205ENST00000494188 PLSCR1O15162 318 aa30.75■■■□□ 2.51
RAB1A-205ENST00000494188 TOGARAM1Q9Y4F4 1720 aa30.74■■■□□ 2.51
RAB1A-205ENST00000494188 NKX1-1Q15270 411 aaPredicted RBP30.74■■■□□ 2.51
RAB1A-205ENST00000494188 RREB1Q92766 1687 aa30.74■■■□□ 2.51
RAB1A-205ENST00000494188 KAT6BQ8WYB5 2073 aa30.72■■■□□ 2.51
RAB1A-205ENST00000494188 U2AF1L5P0DN76 240 aaPredicted RBP30.72■■■□□ 2.51
RAB1A-205ENST00000494188 U2AF1Q01081 240 aaKnown RBP eCLIP30.72■■■□□ 2.51
RAB1A-205ENST00000494188 C1orf141Q5JVX7 400 aa30.72■■■□□ 2.51
RAB1A-205ENST00000494188 PRKRIP1Q9H875 184 aaPredicted RBP30.71■■■□□ 2.51
RAB1A-205ENST00000494188 HSP90AB1P08238 724 aaKnown RBP30.69■■■□□ 2.5
RAB1A-205ENST00000494188 NUP188Q5SRE5 1749 aa30.69■■■□□ 2.5
RAB1A-205ENST00000494188 MPRIPQ6WCQ1 1025 aa30.68■■■□□ 2.5
RAB1A-205ENST00000494188 RSPH6AQ9H0K4 717 aa30.67■■■□□ 2.5
RAB1A-205ENST00000494188 PRKAR2BP31323 418 aa30.66■■■□□ 2.5
RAB1A-205ENST00000494188 TXNRD1Q16881 649 aa30.65■■■□□ 2.5
RAB1A-205ENST00000494188 MTHFSDQ2M296 383 aaKnown RBP30.65■■■□□ 2.5
RAB1A-205ENST00000494188 DCAF5Q96JK2 942 aa30.65■■■□□ 2.5
RAB1A-205ENST00000494188 KDM6AO15550 1401 aaPredicted RBP30.64■■■□□ 2.5
RAB1A-205ENST00000494188 AKAP4Q5JQC9 854 aa30.64■■■□□ 2.5
RAB1A-205ENST00000494188 ITGB4P16144 1822 aa30.63■■■□□ 2.49
RAB1A-205ENST00000494188 PROM2Q8N271 834 aa30.63■■■□□ 2.49
RAB1A-205ENST00000494188 TMOD3Q9NYL9 352 aa30.63■■■□□ 2.49
RAB1A-205ENST00000494188 FCHSD2O94868 740 aa30.61■■■□□ 2.49
RAB1A-205ENST00000494188 NBPF14Q5TI25 921 aa30.6■■■□□ 2.49
RAB1A-205ENST00000494188 GAS2L2Q8NHY3 880 aa30.6■■■□□ 2.49
RAB1A-205ENST00000494188 PIGBQ92521 554 aa30.6■■■□□ 2.49
RAB1A-205ENST00000494188 ERVV-2B6SEH9 535 aa30.59■■■□□ 2.49
RAB1A-205ENST00000494188 PSDA5PKW4 1024 aaPredicted RBP30.57■■■□□ 2.48
RAB1A-205ENST00000494188 PHACTR3Q96KR7 559 aa30.57■■■□□ 2.48
RAB1A-205ENST00000494188 PALLDQ8WX93 1383 aa30.56■■■□□ 2.48
RAB1A-205ENST00000494188 CABP4P57796 275 aa30.56■■■□□ 2.48
RAB1A-205ENST00000494188 R3HDM1Q15032 1099 aaKnown RBP30.56■■■□□ 2.48
RAB1A-205ENST00000494188 LY75O60449 1722 aa30.56■■■□□ 2.48
RAB1A-205ENST00000494188 ANP32CO43423 234 aa30.55■■■□□ 2.48
RAB1A-205ENST00000494188 MAP3K5Q99683 1374 aa30.54■■■□□ 2.48
RAB1A-205ENST00000494188 SLC27A3Q5K4L6 730 aa30.54■■■□□ 2.48
RAB1A-205ENST00000494188 SMARCC1Q92922 1105 aaPredicted RBP30.54■■■□□ 2.48
RAB1A-205ENST00000494188 NEFMP07197 916 aa30.53■■■□□ 2.48
RAB1A-205ENST00000494188 ANO8Q9HCE9 1232 aaPredicted RBP30.53■■■□□ 2.48
RAB1A-205ENST00000494188 LRRC4BQ9NT99 713 aa30.53■■■□□ 2.48
RAB1A-205ENST00000494188 SCN11AQ9UI33 1791 aa30.53■■■□□ 2.48
RAB1A-205ENST00000494188 LGR6Q9HBX8 967 aa30.52■■■□□ 2.48
RAB1A-205ENST00000494188 CCNL1Q9UK58 526 aaPredicted RBP30.52■■■□□ 2.48
RAB1A-205ENST00000494188 GNAT3A8MTJ3 354 aa30.51■■■□□ 2.47
RAB1A-205ENST00000494188 RNMTO43148 476 aaKnown RBP30.51■■■□□ 2.47
RAB1A-205ENST00000494188 KCNQ4P56696 695 aa30.51■■■□□ 2.47
RAB1A-205ENST00000494188 WDR43Q15061 677 aaKnown RBP eCLIP30.5■■■□□ 2.47
RAB1A-205ENST00000494188 ASAP1Q9ULH1 1129 aa30.5■■■□□ 2.47
RAB1A-205ENST00000494188 PAPPAQ13219 1627 aa30.5■■■□□ 2.47
RAB1A-205ENST00000494188 NFATC2IPQ8NCF5 419 aa30.49■■■□□ 2.47
RAB1A-205ENST00000494188 PNNQ9H307 717 aaKnown RBP30.49■■■□□ 2.47
RAB1A-205ENST00000494188 STK32BQ9NY57 414 aa30.49■■■□□ 2.47
RAB1A-205ENST00000494188 ATG3Q9NT62 314 aa30.48■■■□□ 2.47
RAB1A-205ENST00000494188 ADAMTS7Q9UKP4 1686 aa30.48■■■□□ 2.47
RAB1A-205ENST00000494188 MAPK8IP3Q9UPT6 1336 aa30.47■■■□□ 2.47
RAB1A-205ENST00000494188 MRC1P22897 1456 aa30.47■■■□□ 2.47
RAB1A-205ENST00000494188 SLC52A2Q9HAB3 445 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms