RNA–Protein interactions for RNA: ENST00000494146.5

PTK7-219, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 4

Gene PTK7, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-219ENST00000494146 NUDCQ9Y266 331 aa13.32□□□□□ -0.28
PTK7-219ENST00000494146 SULT6B1Q6IMI4 303 aa13.31□□□□□ -0.28
PTK7-219ENST00000494146 MARCH10Q8NA82 808 aaPredicted RBP13.31□□□□□ -0.28
PTK7-219ENST00000494146 NCAPD2Q15021 1401 aa13.3□□□□□ -0.28
PTK7-219ENST00000494146 PARP4Q9UKK3 1724 aaKnown RBP13.3□□□□□ -0.28
PTK7-219ENST00000494146 DDX54Q8TDD1 881 aaKnown RBP13.3□□□□□ -0.28
PTK7-219ENST00000494146 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
PTK7-219ENST00000494146 SPG7Q9UQ90 795 aa13.3□□□□□ -0.28
PTK7-219ENST00000494146 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
PTK7-219ENST00000494146 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
PTK7-219ENST00000494146 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
PTK7-219ENST00000494146 U2SURPO15042 1029 aaKnown RBP13.29□□□□□ -0.28
PTK7-219ENST00000494146 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
PTK7-219ENST00000494146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.29□□□□□ -0.281e-8■□□□□ 8.5
PTK7-219ENST00000494146 MEGF6O75095 1541 aa13.29□□□□□ -0.28
PTK7-219ENST00000494146 BRWD3Q6RI45 1802 aa13.28□□□□□ -0.28
PTK7-219ENST00000494146 PLEKHO1Q53GL0 409 aaPredicted RBP13.28□□□□□ -0.28
PTK7-219ENST00000494146 PLEKHG2Q9H7P9 1386 aa13.28□□□□□ -0.28
PTK7-219ENST00000494146 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.29
PTK7-219ENST00000494146 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
PTK7-219ENST00000494146 PCDH11XQ9BZA7 1347 aa13.27□□□□□ -0.29
PTK7-219ENST00000494146 PCDH11YQ9BZA8 1340 aa13.27□□□□□ -0.29
PTK7-219ENST00000494146 LRRC37A3O60309 1634 aa13.27□□□□□ -0.29
PTK7-219ENST00000494146 BCL9O00512 1426 aa13.26□□□□□ -0.29
PTK7-219ENST00000494146 TRIM37O94972 964 aa13.26□□□□□ -0.29
PTK7-219ENST00000494146 COL3A1P02461 1466 aaPredicted RBP13.26□□□□□ -0.29
PTK7-219ENST00000494146 HMOX1P09601 288 aa13.26□□□□□ -0.29
PTK7-219ENST00000494146 RGPD2P0DJD1 1756 aa13.26□□□□□ -0.29
PTK7-219ENST00000494146 KDRP35968 1356 aa13.26□□□□□ -0.29
PTK7-219ENST00000494146 ZBED9Q6R2W3 1325 aa13.26□□□□□ -0.29
PTK7-219ENST00000494146 WNK3Q9BYP7 1800 aa13.25□□□□□ -0.29
PTK7-219ENST00000494146 U2AF1L5P0DN76 240 aaPredicted RBP13.25□□□□□ -0.29
PTK7-219ENST00000494146 HNRNPUQ00839 825 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTK7-219ENST00000494146 U2AF1Q01081 240 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTK7-219ENST00000494146 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
PTK7-219ENST00000494146 SENP3-EIF4A1A0A087X0R7 540 aa13.24□□□□□ -0.29
PTK7-219ENST00000494146 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
PTK7-219ENST00000494146 CYP27B1O15528 508 aa13.23□□□□□ -0.29
PTK7-219ENST00000494146 FCHSD2O94868 740 aa13.23□□□□□ -0.29
PTK7-219ENST00000494146 NEFLP07196 543 aa13.23□□□□□ -0.29
PTK7-219ENST00000494146 BAG6P46379 1132 aa13.23□□□□□ -0.29
PTK7-219ENST00000494146 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
PTK7-219ENST00000494146 APBA3O96018 575 aa13.22□□□□□ -0.29
PTK7-219ENST00000494146 HSP90AB1P08238 724 aaKnown RBP13.22□□□□□ -0.29
PTK7-219ENST00000494146 PHKG2P15735 406 aa13.22□□□□□ -0.29
PTK7-219ENST00000494146 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
PTK7-219ENST00000494146 C1orf141Q5JVX7 400 aa13.22□□□□□ -0.29
PTK7-219ENST00000494146 ACSBG1Q96GR2 724 aa13.22□□□□□ -0.29
PTK7-219ENST00000494146 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
PTK7-219ENST00000494146 RGPD1P0DJD0 1748 aa13.22□□□□□ -0.29
PTK7-219ENST00000494146 ZNF530Q6P9A1 599 aaPredicted RBP13.21□□□□□ -0.29
PTK7-219ENST00000494146 KCNQ2O43526 872 aa13.2□□□□□ -0.3
PTK7-219ENST00000494146 NEFMP07197 916 aa13.2□□□□□ -0.3
PTK7-219ENST00000494146 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
PTK7-219ENST00000494146 PRIM1P49642 420 aaKnown RBP13.2□□□□□ -0.3
PTK7-219ENST00000494146 AKAP4Q5JQC9 854 aa13.2□□□□□ -0.3
PTK7-219ENST00000494146 SYTL4Q96C24 671 aaPredicted RBP13.2□□□□□ -0.3
PTK7-219ENST00000494146 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
PTK7-219ENST00000494146 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTK7-219ENST00000494146 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
PTK7-219ENST00000494146 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
PTK7-219ENST00000494146 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
PTK7-219ENST00000494146 PLSCR1O15162 318 aa13.18□□□□□ -0.3
PTK7-219ENST00000494146 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
PTK7-219ENST00000494146 PKD1L3Q7Z443 1732 aa13.17□□□□□ -0.3
PTK7-219ENST00000494146 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
PTK7-219ENST00000494146 PTF1AQ7RTS3 328 aa13.17□□□□□ -0.3
PTK7-219ENST00000494146 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
PTK7-219ENST00000494146 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
PTK7-219ENST00000494146 ERVV-2B6SEH9 535 aa13.16□□□□□ -0.3
PTK7-219ENST00000494146 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
PTK7-219ENST00000494146 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
PTK7-219ENST00000494146 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
PTK7-219ENST00000494146 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
PTK7-219ENST00000494146 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
PTK7-219ENST00000494146 CAMKK2Q96RR4 588 aa13.16□□□□□ -0.3
PTK7-219ENST00000494146 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.3
PTK7-219ENST00000494146 MAPK8IP3Q9UPT6 1336 aa13.14□□□□□ -0.31
PTK7-219ENST00000494146 SHANK3Q9BYB0 1731 aa13.14□□□□□ -0.31
PTK7-219ENST00000494146 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
PTK7-219ENST00000494146 GNAT3A8MTJ3 354 aa13.14□□□□□ -0.31
PTK7-219ENST00000494146 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
PTK7-219ENST00000494146 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
PTK7-219ENST00000494146 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
PTK7-219ENST00000494146 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
PTK7-219ENST00000494146 CABP4P57796 275 aa13.13□□□□□ -0.31
PTK7-219ENST00000494146 PNISRQ8TF01 805 aaKnown RBP13.13□□□□□ -0.31
PTK7-219ENST00000494146 PIGBQ92521 554 aa13.13□□□□□ -0.31
PTK7-219ENST00000494146 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
PTK7-219ENST00000494146 MAP3K5Q99683 1374 aa13.12□□□□□ -0.31
PTK7-219ENST00000494146 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
PTK7-219ENST00000494146 SMARCC1Q92922 1105 aaPredicted RBP13.12□□□□□ -0.31
PTK7-219ENST00000494146 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
PTK7-219ENST00000494146 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
PTK7-219ENST00000494146 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
PTK7-219ENST00000494146 HTATSF1O43719 755 aaKnown RBP13.11□□□□□ -0.31
PTK7-219ENST00000494146 HMGB2P26583 209 aaKnown RBP13.11□□□□□ -0.31
PTK7-219ENST00000494146 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
PTK7-219ENST00000494146 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
PTK7-219ENST00000494146 NFATC2IPQ8NCF5 419 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms