RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 GPR162Q16538 588 aa14.26□□□□□ -0.13
TRAPPC12-222ENST00000493792 ANKRD24Q8TF21 1146 aa14.26□□□□□ -0.13
TRAPPC12-222ENST00000493792 LRRC4BQ9NT99 713 aa14.26□□□□□ -0.13
TRAPPC12-222ENST00000493792 NLRP2Q9NX02 1062 aa14.26□□□□□ -0.13
TRAPPC12-222ENST00000493792 GOLGB1Q14789 3259 aaKnown RBP14.26□□□□□ -0.13
TRAPPC12-222ENST00000493792 PPM1GO15355 546 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC12-222ENST00000493792 ZNF827Q17R98 1081 aa14.25□□□□□ -0.13
TRAPPC12-222ENST00000493792 IP6K1Q92551 441 aa14.25□□□□□ -0.13
TRAPPC12-222ENST00000493792 WASHC2AQ641Q2 1341 aa14.24□□□□□ -0.13
TRAPPC12-222ENST00000493792 CNGB1Q14028 1251 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC12-222ENST00000493792 ACSBG1Q96GR2 724 aa14.24□□□□□ -0.13
TRAPPC12-222ENST00000493792 ERBB3P21860 1342 aa14.23□□□□□ -0.13
TRAPPC12-222ENST00000493792 GIGYF1O75420 1035 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC12-222ENST00000493792 HOXC9P31274 260 aa14.23□□□□□ -0.13
TRAPPC12-222ENST00000493792 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
TRAPPC12-222ENST00000493792 MORC1Q86VD1 984 aa14.22□□□□□ -0.13
TRAPPC12-222ENST00000493792 ANKRD26Q9UPS8 1709 aa14.21□□□□□ -0.13
TRAPPC12-222ENST00000493792 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC12-222ENST00000493792 SLC16A10Q8TF71 515 aa14.21□□□□□ -0.13
TRAPPC12-222ENST00000493792 EMILIN1Q9Y6C2 1016 aa14.21□□□□□ -0.13
TRAPPC12-222ENST00000493792 RTL1A6NKG5 1358 aa14.21□□□□□ -0.14
TRAPPC12-222ENST00000493792 SMG6Q86US8 1419 aaKnown RBP14.2□□□□□ -0.14
TRAPPC12-222ENST00000493792 NSD2O96028 1365 aa14.2□□□□□ -0.14
TRAPPC12-222ENST00000493792 CHD4Q14839 1912 aa14.19□□□□□ -0.14
TRAPPC12-222ENST00000493792 NLGN2Q8NFZ4 835 aa14.19□□□□□ -0.14
TRAPPC12-222ENST00000493792 FLT4P35916 1363 aa14.19□□□□□ -0.14
TRAPPC12-222ENST00000493792 WNK3Q9BYP7 1800 aa14.18□□□□□ -0.14
TRAPPC12-222ENST00000493792 TNS2Q63HR2 1409 aa14.18□□□□□ -0.14
TRAPPC12-222ENST00000493792 IL2RBP14784 551 aa14.18□□□□□ -0.14
TRAPPC12-222ENST00000493792 YBX3P16989 372 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRAPPC12-222ENST00000493792 HSP90AB2PQ58FF8 381 aa14.18□□□□□ -0.14
TRAPPC12-222ENST00000493792 CC2D1BQ5T0F9 858 aaKnown RBP14.18□□□□□ -0.14
TRAPPC12-222ENST00000493792 MAP2P11137 1827 aaKnown RBP14.18□□□□□ -0.14
TRAPPC12-222ENST00000493792 PNPLA7Q6ZV29 1317 aa14.17□□□□□ -0.14
TRAPPC12-222ENST00000493792 FAM208AQ9UK61 1670 aaKnown RBP14.17□□□□□ -0.14
TRAPPC12-222ENST00000493792 PAPPAQ13219 1627 aa14.16□□□□□ -0.14
TRAPPC12-222ENST00000493792 POLKQ9UBT6 870 aa14.16□□□□□ -0.14
TRAPPC12-222ENST00000493792 INSRP06213 1382 aa14.16□□□□□ -0.14
TRAPPC12-222ENST00000493792 KIF24Q5T7B8 1368 aa14.15□□□□□ -0.14
TRAPPC12-222ENST00000493792 POLD1P28340 1107 aa14.15□□□□□ -0.14
TRAPPC12-222ENST00000493792 KCNQ4P56696 695 aa14.15□□□□□ -0.14
TRAPPC12-222ENST00000493792 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC12-222ENST00000493792 SLC27A3Q5K4L6 730 aa14.15□□□□□ -0.14
TRAPPC12-222ENST00000493792 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
TRAPPC12-222ENST00000493792 USHBP1Q8N6Y0 703 aa14.15□□□□□ -0.14
TRAPPC12-222ENST00000493792 RGPD2P0DJD1 1756 aa14.14□□□□□ -0.15
TRAPPC12-222ENST00000493792 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
TRAPPC12-222ENST00000493792 PER1O15534 1290 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC12-222ENST00000493792 GRIN3BO60391 1043 aa14.13□□□□□ -0.15
TRAPPC12-222ENST00000493792 NBPF6Q5VWK0 638 aa14.13□□□□□ -0.15
TRAPPC12-222ENST00000493792 NBPF4Q96M43 638 aa14.13□□□□□ -0.15
TRAPPC12-222ENST00000493792 RAPGEF4Q8WZA2 1011 aa14.12□□□□□ -0.15
TRAPPC12-222ENST00000493792 TFCP2L1Q9NZI6 479 aa14.12□□□□□ -0.15
TRAPPC12-222ENST00000493792 DDX54Q8TDD1 881 aaKnown RBP14.11□□□□□ -0.15
TRAPPC12-222ENST00000493792 SHANK3Q9BYB0 1731 aa14.11□□□□□ -0.15
TRAPPC12-222ENST00000493792 NHSQ6T4R5 1651 aa14.1□□□□□ -0.15
TRAPPC12-222ENST00000493792 TATP17735 454 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC12-222ENST00000493792 PRIM1P49642 420 aaKnown RBP14.09□□□□□ -0.15
TRAPPC12-222ENST00000493792 EIF4A2Q14240 407 aaKnown RBP14.09□□□□□ -0.15
TRAPPC12-222ENST00000493792 COL23A1Q86Y22 540 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC12-222ENST00000493792 HSPA6P17066 643 aa14.08□□□□□ -0.16
TRAPPC12-222ENST00000493792 MTHFSP49914 203 aa14.08□□□□□ -0.16
TRAPPC12-222ENST00000493792 EYA1Q99502 592 aa14.08□□□□□ -0.16
TRAPPC12-222ENST00000493792 ATP10DQ9P241 1426 aa14.07□□□□□ -0.16
TRAPPC12-222ENST00000493792 COL24A1Q17RW2 1714 aa14.07□□□□□ -0.16
TRAPPC12-222ENST00000493792 MEGF6O75095 1541 aa14.07□□□□□ -0.16
TRAPPC12-222ENST00000493792 DDX10Q13206 875 aaKnown RBP14.07□□□□□ -0.16
TRAPPC12-222ENST00000493792 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
TRAPPC12-222ENST00000493792 NPC1L1Q9UHC9 1359 aa14.07□□□□□ -0.16
TRAPPC12-222ENST00000493792 GPBP1L1Q9HC44 474 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC12-222ENST00000493792 CD2APQ9Y5K6 639 aa14.05□□□□□ -0.16
TRAPPC12-222ENST00000493792 BTAF1O14981 1849 aa14.05□□□□□ -0.16
TRAPPC12-222ENST00000493792 SYTL4Q96C24 671 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC12-222ENST00000493792 ADCY9O60503 1353 aa14.04□□□□□ -0.16
TRAPPC12-222ENST00000493792 CCNL1Q9UK58 526 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC12-222ENST00000493792 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
TRAPPC12-222ENST00000493792 IGSF1Q8N6C5 1336 aa14.02□□□□□ -0.17
TRAPPC12-222ENST00000493792 MSL1Q68DK7 614 aa14.02□□□□□ -0.17
TRAPPC12-222ENST00000493792 SPG7Q9UQ90 795 aa14.02□□□□□ -0.17
TRAPPC12-222ENST00000493792 PCDH11XQ9BZA7 1347 aa14.01□□□□□ -0.17
TRAPPC12-222ENST00000493792 PCDH11YQ9BZA8 1340 aa14.01□□□□□ -0.17
TRAPPC12-222ENST00000493792 KIF3CO14782 793 aa14.01□□□□□ -0.17
TRAPPC12-222ENST00000493792 DIAPH1O60610 1272 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-222ENST00000493792 CFAP53Q96M91 514 aa14.01□□□□□ -0.17
TRAPPC12-222ENST00000493792 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
TRAPPC12-222ENST00000493792 MSH5O43196 834 aa14□□□□□ -0.17
TRAPPC12-222ENST00000493792 IL13P35225 146 aa14□□□□□ -0.17
TRAPPC12-222ENST00000493792 SULT6B1Q6IMI4 303 aa14□□□□□ -0.17
TRAPPC12-222ENST00000493792 DNAJC5GQ8N7S2 189 aa14□□□□□ -0.17
TRAPPC12-222ENST00000493792 ZNF526Q8TF50 670 aaPredicted RBP14□□□□□ -0.17
TRAPPC12-222ENST00000493792 NCAPD2Q15021 1401 aa13.99□□□□□ -0.17
TRAPPC12-222ENST00000493792 QSER1Q2KHR3 1735 aa13.99□□□□□ -0.17
TRAPPC12-222ENST00000493792 PPP2R1AP30153 589 aa13.99□□□□□ -0.17
TRAPPC12-222ENST00000493792 AEBP1Q8IUX7 1158 aa13.99□□□□□ -0.17
TRAPPC12-222ENST00000493792 HMOX1P09601 288 aa13.98□□□□□ -0.17
TRAPPC12-222ENST00000493792 AMIGO3Q86WK7 504 aa13.98□□□□□ -0.17
TRAPPC12-222ENST00000493792 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
TRAPPC12-222ENST00000493792 CYP27B1O15528 508 aa13.97□□□□□ -0.17
TRAPPC12-222ENST00000493792 PLEKHO1Q53GL0 409 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC12-222ENST00000493792 PKD1L3Q7Z443 1732 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms