RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ATP5J2-PTCD1G3V325 749 aa8.97□□□□□ -0.97
ITGB1-216ENST00000493758 ATP9BO43861 1147 aa8.97□□□□□ -0.97
ITGB1-216ENST00000493758 GNRH1P01148 92 aa8.97□□□□□ -0.97
ITGB1-216ENST00000493758 PTGIRP43119 386 aa8.97□□□□□ -0.97
ITGB1-216ENST00000493758 SOS2Q07890 1332 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-216ENST00000493758 POTECB2RU33 542 aa8.96□□□□□ -0.98
ITGB1-216ENST00000493758 WASLO00401 505 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-216ENST00000493758 BMP2P12643 396 aa8.96□□□□□ -0.98
ITGB1-216ENST00000493758 GPC1P35052 558 aa8.96□□□□□ -0.98
ITGB1-216ENST00000493758 CALR3Q96L12 384 aaKnown RBP8.96□□□□□ -0.98
ITGB1-216ENST00000493758 SKIP12755 728 aa8.95□□□□□ -0.98
ITGB1-216ENST00000493758 CLN3Q13286 438 aa8.95□□□□□ -0.98
ITGB1-216ENST00000493758 TSGA10IPQ3SY00 556 aa8.95□□□□□ -0.98
ITGB1-216ENST00000493758 USP17L3A6NCW0 530 aa8.94□□□□□ -0.98
ITGB1-216ENST00000493758 USP17L4A6NCW7 530 aa8.94□□□□□ -0.98
ITGB1-216ENST00000493758 C11orf95C9JLR9 678 aaPredicted RBP8.94□□□□□ -0.98
ITGB1-216ENST00000493758 EML3Q32P44 896 aa8.94□□□□□ -0.98
ITGB1-216ENST00000493758 ZNF787Q6DD87 383 aa8.94□□□□□ -0.98
ITGB1-216ENST00000493758 USP17L2Q6R6M4 530 aa8.94□□□□□ -0.98
ITGB1-216ENST00000493758 TBC1D9Q6ZT07 1266 aa8.94□□□□□ -0.98
ITGB1-216ENST00000493758 USP17L1Q7RTZ2 530 aa8.94□□□□□ -0.98
ITGB1-216ENST00000493758 C14orf37Q86TY3 774 aa8.94□□□□□ -0.98
ITGB1-216ENST00000493758 AGBL1Q96MI9 1066 aa8.94□□□□□ -0.98
ITGB1-216ENST00000493758 MAFBQ9Y5Q3 323 aaPredicted RBP8.94□□□□□ -0.98
ITGB1-216ENST00000493758 SNRPBP14678 240 aaKnown RBP8.93□□□□□ -0.98
ITGB1-216ENST00000493758 RELBQ01201 579 aa8.93□□□□□ -0.98
ITGB1-216ENST00000493758 NCOA4Q13772 614 aa8.93□□□□□ -0.98
ITGB1-216ENST00000493758 OXLD1Q5BKU9 147 aa8.93□□□□□ -0.98
ITGB1-216ENST00000493758 C6orf118Q5T5N4 469 aa8.93□□□□□ -0.98
ITGB1-216ENST00000493758 PPP1R12CQ9BZL4 782 aa8.93□□□□□ -0.98
ITGB1-216ENST00000493758 HRH3Q9Y5N1 445 aa8.93□□□□□ -0.98
ITGB1-216ENST00000493758 TTLL8A6PVC2 850 aa8.92□□□□□ -0.98
ITGB1-216ENST00000493758 RNF144AP50876 292 aaPredicted RBP8.92□□□□□ -0.98
ITGB1-216ENST00000493758 PALM3A6NDB9 673 aaPredicted RBP8.91□□□□□ -0.98
ITGB1-216ENST00000493758 FOXD4L5Q5VV16 416 aaPredicted RBP8.91□□□□□ -0.98
ITGB1-216ENST00000493758 RNF217Q8TC41 542 aa8.91□□□□□ -0.98
ITGB1-216ENST00000493758 INSM2Q96T92 566 aaPredicted RBP8.91□□□□□ -0.98
ITGB1-216ENST00000493758 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
ITGB1-216ENST00000493758 DNMT3LQ9UJW3 386 aa8.91□□□□□ -0.98
ITGB1-216ENST00000493758 NOD1Q9Y239 953 aa8.91□□□□□ -0.98
ITGB1-216ENST00000493758 A0A1W2PRU2 124 aa8.9□□□□□ -0.98
ITGB1-216ENST00000493758 SCNN1DP51172 638 aa8.9□□□□□ -0.98
ITGB1-216ENST00000493758 ESCO1Q5FWF5 840 aa8.9□□□□□ -0.98
ITGB1-216ENST00000493758 TRIM50Q86XT4 487 aa8.9□□□□□ -0.98
ITGB1-216ENST00000493758 ARHGEF10LQ9HCE6 1279 aa8.9□□□□□ -0.98
ITGB1-216ENST00000493758 ZNF777Q9ULD5 760 aaPredicted RBP8.9□□□□□ -0.98
ITGB1-216ENST00000493758 PCDHGA11Q9Y5H2 935 aa8.9□□□□□ -0.98
ITGB1-216ENST00000493758 CTSOP43234 321 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-216ENST00000493758 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.89□□□□□ -0.995e-6■□□□□ 10.3
ITGB1-216ENST00000493758 NPAS3Q8IXF0 933 aa8.89□□□□□ -0.99
ITGB1-216ENST00000493758 ESYT1Q9BSJ8 1104 aa8.89□□□□□ -0.99
ITGB1-216ENST00000493758 IL2RAP01589 272 aa8.88□□□□□ -0.99
ITGB1-216ENST00000493758 GTF2IP78347 998 aa8.88□□□□□ -0.99
ITGB1-216ENST00000493758 CFAP70Q5T0N1 1121 aa8.88□□□□□ -0.99
ITGB1-216ENST00000493758 XAGE2Q96GT9 111 aa8.88□□□□□ -0.99
ITGB1-216ENST00000493758 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
ITGB1-216ENST00000493758 ETNK1Q9HBU6 452 aa8.88□□□□□ -0.99
ITGB1-216ENST00000493758 TFIP11Q9UBB9 837 aaKnown RBP8.88□□□□□ -0.99
ITGB1-216ENST00000493758 MAN1A2O60476 641 aa8.87□□□□□ -0.99
ITGB1-216ENST00000493758 ATP1A2P50993 1020 aa8.87□□□□□ -0.99
ITGB1-216ENST00000493758 POLMQ9NP87 494 aaPredicted RBP8.87□□□□□ -0.99
ITGB1-216ENST00000493758 INHAP05111 366 aa8.86□□□□□ -0.99
ITGB1-216ENST00000493758 SIX5Q8N196 739 aa8.86□□□□□ -0.99
ITGB1-216ENST00000493758 DEPDC4Q8N2C3 294 aa8.86□□□□□ -0.99
ITGB1-216ENST00000493758 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
ITGB1-216ENST00000493758 FHDC1Q9C0D6 1143 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-216ENST00000493758 SPATA31C2B4DYI2 1134 aa8.85□□□□□ -0.99
ITGB1-216ENST00000493758 GDF10P55107 478 aa8.85□□□□□ -0.99
ITGB1-216ENST00000493758 WDR44Q5JSH3 913 aa8.85□□□□□ -0.99
ITGB1-216ENST00000493758 LARGE2Q8N3Y3 721 aa8.85□□□□□ -0.99
ITGB1-216ENST00000493758 NLRP3Q96P20 1036 aa8.85□□□□□ -0.99
ITGB1-216ENST00000493758 SLC4A9Q96Q91 983 aa8.85□□□□□ -0.99
ITGB1-216ENST00000493758 GRIP2Q9C0E4 1043 aa8.85□□□□□ -0.99
ITGB1-216ENST00000493758 TMEM229AB2RXF0 380 aa8.84□□□□□ -0.99
ITGB1-216ENST00000493758 MEN1O00255 615 aa8.84□□□□□ -0.99
ITGB1-216ENST00000493758 CLDN10P78369 228 aa8.84□□□□□ -0.99
ITGB1-216ENST00000493758 KANK4Q5T7N3 995 aaPredicted RBP8.84□□□□□ -0.99
ITGB1-216ENST00000493758 RAB6BQ9NRW1 208 aa8.84□□□□□ -0.99
ITGB1-216ENST00000493758 SERPINA10Q9UK55 444 aa8.84□□□□□ -0.99
ITGB1-216ENST00000493758 FAM196BA6NMK8 535 aa8.83□□□□□ -1
ITGB1-216ENST00000493758 M0R2N6 131 aa8.83□□□□□ -1
ITGB1-216ENST00000493758 MTFR1Q15390 333 aa8.83□□□□□ -1
ITGB1-216ENST00000493758 LYSMD3Q7Z3D4 306 aa8.83□□□□□ -1
ITGB1-216ENST00000493758 MKRN1Q9UHC7 482 aaKnown RBP8.83□□□□□ -1
ITGB1-216ENST00000493758 TIMELESSQ9UNS1 1208 aa8.83□□□□□ -1
ITGB1-216ENST00000493758 DKK1O94907 266 aa8.82□□□□□ -1
ITGB1-216ENST00000493758 DNAAF2Q9NVR5 837 aaKnown RBP8.82□□□□□ -1
ITGB1-216ENST00000493758 KIAA1024Q9UPX6 916 aa8.82□□□□□ -1
ITGB1-216ENST00000493758 CENPCQ03188 943 aa8.81□□□□□ -1
ITGB1-216ENST00000493758 ZNF295-AS1Q8N0V1 137 aa8.81□□□□□ -1
ITGB1-216ENST00000493758 OGFOD1Q8N543 542 aa8.81□□□□□ -1
ITGB1-216ENST00000493758 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
ITGB1-216ENST00000493758 C1orf115Q9H7X2 142 aa8.81□□□□□ -1
ITGB1-216ENST00000493758 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
ITGB1-216ENST00000493758 SENP3-EIF4A1A0A087X0R7 540 aa8.8□□□□□ -1
ITGB1-216ENST00000493758 SOBPA7XYQ1 873 aa8.8□□□□□ -1
ITGB1-216ENST00000493758 ZBTB7BO15156 539 aaPredicted RBP8.8□□□□□ -1
ITGB1-216ENST00000493758 LMOD1P29536 600 aaPredicted RBP8.8□□□□□ -1
ITGB1-216ENST00000493758 EPHA4P54764 986 aa8.8□□□□□ -1
ITGB1-216ENST00000493758 SRPK2P78362 688 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms