RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PROM2Q8N271 834 aa15.79■□□□□ 0.12
CTSA-209ENST00000493522 NPC1L1Q9UHC9 1359 aa15.78■□□□□ 0.12
CTSA-209ENST00000493522 ZBTB7AO95365 584 aa15.78■□□□□ 0.12
CTSA-209ENST00000493522 FLT4P35916 1363 aa15.77■□□□□ 0.12
CTSA-209ENST00000493522 SLC15A2Q16348 729 aa15.77■□□□□ 0.12
CTSA-209ENST00000493522 PDGFDQ9GZP0 370 aaPredicted RBP15.77■□□□□ 0.12
CTSA-209ENST00000493522 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.11
CTSA-209ENST00000493522 KIF24Q5T7B8 1368 aa15.76■□□□□ 0.11
CTSA-209ENST00000493522 ERBB3P21860 1342 aa15.76■□□□□ 0.11
CTSA-209ENST00000493522 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
CTSA-209ENST00000493522 HOXC9P31274 260 aa15.76■□□□□ 0.11
CTSA-209ENST00000493522 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
CTSA-209ENST00000493522 EMILIN1Q9Y6C2 1016 aa15.76■□□□□ 0.11
CTSA-209ENST00000493522 PPM1GO15355 546 aaPredicted RBP15.75■□□□□ 0.11
CTSA-209ENST00000493522 IP6K1Q92551 441 aa15.75■□□□□ 0.11
CTSA-209ENST00000493522 NHSQ6T4R5 1651 aa15.74■□□□□ 0.11
CTSA-209ENST00000493522 PTGER2P43116 358 aa15.74■□□□□ 0.11
CTSA-209ENST00000493522 ANKRD24Q8TF21 1146 aa15.74■□□□□ 0.11
CTSA-209ENST00000493522 LTV1Q96GA3 475 aaPredicted RBP15.74■□□□□ 0.11
CTSA-209ENST00000493522 NLRP2Q9NX02 1062 aa15.74■□□□□ 0.11
CTSA-209ENST00000493522 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
CTSA-209ENST00000493522 IL2RBP14784 551 aa15.73■□□□□ 0.11
CTSA-209ENST00000493522 MTFR1LQ9H019 292 aa15.73■□□□□ 0.11
CTSA-209ENST00000493522 INSRP06213 1382 aa15.73■□□□□ 0.11
CTSA-209ENST00000493522 ACSBG1Q96GR2 724 aa15.72■□□□□ 0.11
CTSA-209ENST00000493522 GOLGB1Q14789 3259 aaKnown RBP15.71■□□□□ 0.11
CTSA-209ENST00000493522 POLKQ9UBT6 870 aa15.71■□□□□ 0.11
CTSA-209ENST00000493522 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
CTSA-209ENST00000493522 SYT17Q9BSW7 474 aa15.7■□□□□ 0.1
CTSA-209ENST00000493522 FHDC1Q9C0D6 1143 aaPredicted RBP15.7■□□□□ 0.1
CTSA-209ENST00000493522 SHANK3Q9BYB0 1731 aa15.69■□□□□ 0.1
CTSA-209ENST00000493522 PAPPAQ13219 1627 aa15.68■□□□□ 0.1
CTSA-209ENST00000493522 SGIP1Q9BQI5 828 aa15.67■□□□□ 0.1
CTSA-209ENST00000493522 PKD1L3Q7Z443 1732 aa15.67■□□□□ 0.1
CTSA-209ENST00000493522 ARXQ96QS3 562 aa15.66■□□□□ 0.1
CTSA-209ENST00000493522 BTAF1O14981 1849 aa15.66■□□□□ 0.1
CTSA-209ENST00000493522 COL3A1P02461 1466 aaPredicted RBP15.65■□□□□ 0.1
CTSA-209ENST00000493522 MAP3K5Q99683 1374 aa15.64■□□□□ 0.09
CTSA-209ENST00000493522 MTHFSP49914 203 aa15.64■□□□□ 0.09
CTSA-209ENST00000493522 USHBP1Q8N6Y0 703 aa15.64■□□□□ 0.09
CTSA-209ENST00000493522 ZNF784Q8NCA9 323 aaPredicted RBP15.64■□□□□ 0.09
CTSA-209ENST00000493522 MEGF6O75095 1541 aa15.63■□□□□ 0.09
CTSA-209ENST00000493522 EIF4A2Q14240 407 aaKnown RBP15.63■□□□□ 0.09
CTSA-209ENST00000493522 ZNF827Q17R98 1081 aa15.63■□□□□ 0.09
CTSA-209ENST00000493522 SLC27A3Q5K4L6 730 aa15.63■□□□□ 0.09
CTSA-209ENST00000493522 VIRMAQ69YN4 1812 aaKnown RBP15.63■□□□□ 0.09
CTSA-209ENST00000493522 KAT6BQ8WYB5 2073 aa15.63■□□□□ 0.09
CTSA-209ENST00000493522 NCAPD2Q15021 1401 aa15.62■□□□□ 0.09
CTSA-209ENST00000493522 PPP2R1AP30153 589 aa15.62■□□□□ 0.09
CTSA-209ENST00000493522 NBPF6Q5VWK0 638 aa15.62■□□□□ 0.09
CTSA-209ENST00000493522 DDX54Q8TDD1 881 aaKnown RBP15.62■□□□□ 0.09
CTSA-209ENST00000493522 NBPF4Q96M43 638 aa15.62■□□□□ 0.09
CTSA-209ENST00000493522 LRRC4BQ9NT99 713 aa15.62■□□□□ 0.09
CTSA-209ENST00000493522 DOT1LQ8TEK3 1739 aa15.61■□□□□ 0.09
CTSA-209ENST00000493522 SLC16A10Q8TF71 515 aa15.61■□□□□ 0.09
CTSA-209ENST00000493522 POLD1P28340 1107 aa15.6■□□□□ 0.09
CTSA-209ENST00000493522 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
CTSA-209ENST00000493522 SYTL4Q96C24 671 aaPredicted RBP15.6■□□□□ 0.09
CTSA-209ENST00000493522 RALBP1Q15311 655 aa15.59■□□□□ 0.09
CTSA-209ENST00000493522 CFAP53Q96M91 514 aa15.59■□□□□ 0.09
CTSA-209ENST00000493522 RAPGEF4Q8WZA2 1011 aa15.58■□□□□ 0.08
CTSA-209ENST00000493522 EYA1Q99502 592 aa15.58■□□□□ 0.08
CTSA-209ENST00000493522 TFCP2L1Q9NZI6 479 aa15.58■□□□□ 0.08
CTSA-209ENST00000493522 IGSF1Q8N6C5 1336 aa15.58■□□□□ 0.08
CTSA-209ENST00000493522 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
CTSA-209ENST00000493522 CHD4Q14839 1912 aa15.57■□□□□ 0.08
CTSA-209ENST00000493522 DIAPH1O60610 1272 aaKnown RBP15.57■□□□□ 0.08
CTSA-209ENST00000493522 GPR162Q16538 588 aa15.57■□□□□ 0.08
CTSA-209ENST00000493522 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
CTSA-209ENST00000493522 PNPLA7Q6ZV29 1317 aa15.57■□□□□ 0.08
CTSA-209ENST00000493522 TATP17735 454 aaPredicted RBP15.56■□□□□ 0.08
CTSA-209ENST00000493522 IL13P35225 146 aa15.56■□□□□ 0.08
CTSA-209ENST00000493522 PRIM1P49642 420 aaKnown RBP15.56■□□□□ 0.08
CTSA-209ENST00000493522 ZCRB1Q8TBF4 217 aaKnown RBP15.56■□□□□ 0.08
CTSA-209ENST00000493522 MYBBP1AQ9BQG0 1328 aaKnown RBP15.56■□□□□ 0.08
CTSA-209ENST00000493522 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
CTSA-209ENST00000493522 ITGB4P16144 1822 aa15.54■□□□□ 0.08
CTSA-209ENST00000493522 PRKRIP1Q9H875 184 aaPredicted RBP15.54■□□□□ 0.08
CTSA-209ENST00000493522 KDRP35968 1356 aa15.53■□□□□ 0.08
CTSA-209ENST00000493522 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
CTSA-209ENST00000493522 KCNQ4P56696 695 aa15.53■□□□□ 0.08
CTSA-209ENST00000493522 AEBP1Q8IUX7 1158 aa15.53■□□□□ 0.08
CTSA-209ENST00000493522 CCNL1Q9UK58 526 aaPredicted RBP15.53■□□□□ 0.08
CTSA-209ENST00000493522 SULT6B1Q6IMI4 303 aa15.52■□□□□ 0.08
CTSA-209ENST00000493522 PELP1Q8IZL8 1130 aaKnown RBP15.52■□□□□ 0.08
CTSA-209ENST00000493522 SCN11AQ9UI33 1791 aa15.52■□□□□ 0.07
CTSA-209ENST00000493522 LY75O60449 1722 aa15.51■□□□□ 0.07
CTSA-209ENST00000493522 COL24A1Q17RW2 1714 aa15.51■□□□□ 0.07
CTSA-209ENST00000493522 DLG5Q8TDM6 1919 aa15.51■□□□□ 0.07
CTSA-209ENST00000493522 SENP3-EIF4A1A0A087X0R7 540 aa15.51■□□□□ 0.07
CTSA-209ENST00000493522 HMOX1P09601 288 aa15.51■□□□□ 0.07
CTSA-209ENST00000493522 C1QTNF8P60827 252 aa15.51■□□□□ 0.07
CTSA-209ENST00000493522 PLEKHG2Q9H7P9 1386 aa15.5■□□□□ 0.07
CTSA-209ENST00000493522 TUBGCP6Q96RT7 1819 aa15.5■□□□□ 0.07
CTSA-209ENST00000493522 PCDH11XQ9BZA7 1347 aa15.5■□□□□ 0.07
CTSA-209ENST00000493522 PCDH11YQ9BZA8 1340 aa15.5■□□□□ 0.07
CTSA-209ENST00000493522 ANP32CO43423 234 aa15.5■□□□□ 0.07
CTSA-209ENST00000493522 HMGB2P26583 209 aaKnown RBP15.5■□□□□ 0.07
CTSA-209ENST00000493522 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
CTSA-209ENST00000493522 GIGYF1O75420 1035 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms