RNA–Protein interactions for RNA: ENST00000493427.1

ABCD4-215, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 736 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-215ENST00000493427 N4BP2Q86UW6 1770 aaPredicted RBP18.51■□□□□ 0.55
ABCD4-215ENST00000493427 HSPA8P11142 646 aaKnown RBP18.51■□□□□ 0.55
ABCD4-215ENST00000493427 CFAP70Q5T0N1 1121 aa18.5■□□□□ 0.55
ABCD4-215ENST00000493427 C14orf93Q9H972 538 aaKnown RBP18.5■□□□□ 0.55
ABCD4-215ENST00000493427 POLR3AO14802 1390 aaPredicted RBP18.5■□□□□ 0.55
ABCD4-215ENST00000493427 ACEP12821 1306 aa18.49■□□□□ 0.55
ABCD4-215ENST00000493427 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
ABCD4-215ENST00000493427 CCNL1Q9UK58 526 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-215ENST00000493427 USP54Q70EL1 1684 aa18.49■□□□□ 0.55
ABCD4-215ENST00000493427 CCDC7Q96M83 1385 aa18.48■□□□□ 0.55
ABCD4-215ENST00000493427 NUDT16Q96DE0 195 aaKnown RBP18.48■□□□□ 0.55
ABCD4-215ENST00000493427 CREBZFQ9NS37 354 aa18.48■□□□□ 0.55
ABCD4-215ENST00000493427 CNTNAP1P78357 1384 aa18.47■□□□□ 0.55
ABCD4-215ENST00000493427 RNF181Q9P0P0 153 aa18.47■□□□□ 0.55
ABCD4-215ENST00000493427 SLIT3O75094 1523 aa18.46■□□□□ 0.55
ABCD4-215ENST00000493427 WBP1LQ9NX94 342 aa18.46■□□□□ 0.55
ABCD4-215ENST00000493427 SPATA31E1Q6ZUB1 1445 aa18.46■□□□□ 0.55
ABCD4-215ENST00000493427 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
ABCD4-215ENST00000493427 PRPF38BQ5VTL8 546 aaKnown RBP18.44■□□□□ 0.54
ABCD4-215ENST00000493427 C5P01031 1676 aa18.44■□□□□ 0.54
ABCD4-215ENST00000493427 SMIM5Q71RC9 77 aa18.43■□□□□ 0.54
ABCD4-215ENST00000493427 SYTL4Q96C24 671 aaPredicted RBP18.43■□□□□ 0.54
ABCD4-215ENST00000493427 TRAK1Q9UPV9 953 aa18.43■□□□□ 0.54
ABCD4-215ENST00000493427 VIRMAQ69YN4 1812 aaKnown RBP18.42■□□□□ 0.54
ABCD4-215ENST00000493427 FCHSD2O94868 740 aa18.42■□□□□ 0.54
ABCD4-215ENST00000493427 ITGAEP38570 1179 aa18.42■□□□□ 0.54
ABCD4-215ENST00000493427 KIF13BQ9NQT8 1826 aa18.42■□□□□ 0.54
ABCD4-215ENST00000493427 DOT1LQ8TEK3 1739 aa18.41■□□□□ 0.54
ABCD4-215ENST00000493427 A0A0G2JLW4 131 aa18.4■□□□□ 0.54
ABCD4-215ENST00000493427 VEGFBP49765 207 aa18.4■□□□□ 0.54
ABCD4-215ENST00000493427 ERBB3P21860 1342 aa18.4■□□□□ 0.54
ABCD4-215ENST00000493427 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.54
ABCD4-215ENST00000493427 FLAD1Q8NFF5 587 aa18.39■□□□□ 0.53
ABCD4-215ENST00000493427 NSD2O96028 1365 aa18.39■□□□□ 0.53
ABCD4-215ENST00000493427 TOGARAM1Q9Y4F4 1720 aa18.38■□□□□ 0.53
ABCD4-215ENST00000493427 ARFGEF1Q9Y6D6 1849 aa18.38■□□□□ 0.53
ABCD4-215ENST00000493427 VEGFAP15692 232 aaPredicted RBP18.38■□□□□ 0.53
ABCD4-215ENST00000493427 PPARGC1BQ86YN6 1023 aaKnown RBP18.38■□□□□ 0.53
ABCD4-215ENST00000493427 SBF1O95248 1867 aa18.37■□□□□ 0.53
ABCD4-215ENST00000493427 ADGRB1O14514 1584 aa18.36■□□□□ 0.53
ABCD4-215ENST00000493427 IL2RBP14784 551 aa18.36■□□□□ 0.53
ABCD4-215ENST00000493427 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
ABCD4-215ENST00000493427 NLRP6P59044 892 aa18.36■□□□□ 0.53
ABCD4-215ENST00000493427 AMIGO3Q86WK7 504 aa18.36■□□□□ 0.53
ABCD4-215ENST00000493427 PHF14O94880 888 aa18.35■□□□□ 0.53
ABCD4-215ENST00000493427 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.53
ABCD4-215ENST00000493427 TAF1LQ8IZX4 1826 aa18.33■□□□□ 0.53
ABCD4-215ENST00000493427 TGFB2P61812 414 aa18.33■□□□□ 0.52
ABCD4-215ENST00000493427 PLEKHG3A1L390 1219 aa18.32■□□□□ 0.52
ABCD4-215ENST00000493427 SOX12O15370 315 aa18.32■□□□□ 0.52
ABCD4-215ENST00000493427 DPEP1P16444 411 aa18.32■□□□□ 0.52
ABCD4-215ENST00000493427 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
ABCD4-215ENST00000493427 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
ABCD4-215ENST00000493427 MCOLN1Q9GZU1 580 aa18.31■□□□□ 0.52
ABCD4-215ENST00000493427 UBR3Q6ZT12 1888 aa18.31■□□□□ 0.52
ABCD4-215ENST00000493427 NLRP2Q9NX02 1062 aa18.3■□□□□ 0.52
ABCD4-215ENST00000493427 CCDC61Q9Y6R9 512 aa18.3■□□□□ 0.52
ABCD4-215ENST00000493427 USP47Q96K76 1375 aa18.3■□□□□ 0.52
ABCD4-215ENST00000493427 C4BP0C0L5 1744 aa18.29■□□□□ 0.52
ABCD4-215ENST00000493427 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
ABCD4-215ENST00000493427 CDK19Q9BWU1 502 aa18.29■□□□□ 0.52
ABCD4-215ENST00000493427 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
ABCD4-215ENST00000493427 MMP10P09238 476 aa18.28■□□□□ 0.52
ABCD4-215ENST00000493427 AK7Q96M32 723 aa18.27■□□□□ 0.52
ABCD4-215ENST00000493427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.26■□□□□ 0.51
ABCD4-215ENST00000493427 DCAF5Q96JK2 942 aa18.26■□□□□ 0.51
ABCD4-215ENST00000493427 TIAM2Q8IVF5 1701 aa18.26■□□□□ 0.51
ABCD4-215ENST00000493427 ZC3H4Q9UPT8 1303 aaKnown RBP18.25■□□□□ 0.51
ABCD4-215ENST00000493427 SOX10P56693 466 aa18.25■□□□□ 0.51
ABCD4-215ENST00000493427 MAP2K1Q02750 393 aaPredicted RBP18.25■□□□□ 0.51
ABCD4-215ENST00000493427 CHADLQ6NUI6 762 aa18.25■□□□□ 0.51
ABCD4-215ENST00000493427 POTECB2RU33 542 aa18.24■□□□□ 0.51
ABCD4-215ENST00000493427 DLL1O00548 723 aa18.24■□□□□ 0.51
ABCD4-215ENST00000493427 RASSF7Q02833 373 aa18.24■□□□□ 0.51
ABCD4-215ENST00000493427 POTEIP0CG38 1075 aa18.22■□□□□ 0.51
ABCD4-215ENST00000493427 POTEJP0CG39 1038 aa18.22■□□□□ 0.51
ABCD4-215ENST00000493427 TSKSQ9UJT2 592 aa18.22■□□□□ 0.51
ABCD4-215ENST00000493427 KCNA3P22001 575 aa18.21■□□□□ 0.51
ABCD4-215ENST00000493427 NFAT5O94916 1531 aa18.21■□□□□ 0.51
ABCD4-215ENST00000493427 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
ABCD4-215ENST00000493427 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
ABCD4-215ENST00000493427 PASKQ96RG2 1323 aa18.2■□□□□ 0.5
ABCD4-215ENST00000493427 TMEM88BA6NKF7 163 aa18.19■□□□□ 0.5
ABCD4-215ENST00000493427 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
ABCD4-215ENST00000493427 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
ABCD4-215ENST00000493427 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
ABCD4-215ENST00000493427 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
ABCD4-215ENST00000493427 PIM2Q9P1W9 311 aa18.18■□□□□ 0.5
ABCD4-215ENST00000493427 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
ABCD4-215ENST00000493427 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
ABCD4-215ENST00000493427 HABP4Q5JVS0 413 aaKnown RBP18.17■□□□□ 0.5
ABCD4-215ENST00000493427 ZNF219Q9P2Y4 722 aaPredicted RBP18.17■□□□□ 0.5
ABCD4-215ENST00000493427 CUL9Q8IWT3 2517 aa18.17■□□□□ 0.5
ABCD4-215ENST00000493427 LTBP1Q14766 1721 aa18.16■□□□□ 0.5
ABCD4-215ENST00000493427 SSFA2P28290 1259 aa18.16■□□□□ 0.5
ABCD4-215ENST00000493427 DGKZQ13574 1117 aa18.16■□□□□ 0.5
ABCD4-215ENST00000493427 BEGAINQ9BUH8 593 aa18.16■□□□□ 0.5
ABCD4-215ENST00000493427 CCDC87Q9NVE4 849 aa18.16■□□□□ 0.5
ABCD4-215ENST00000493427 THSD7BQ9C0I4 1608 aa18.16■□□□□ 0.5
ABCD4-215ENST00000493427 C4AP0C0L4 1744 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms