RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
CLIP2-209ENST00000493166 TRIM37O94972 964 aa17.26■□□□□ 0.35
CLIP2-209ENST00000493166 ZCRB1Q8TBF4 217 aaKnown RBP17.26■□□□□ 0.35
CLIP2-209ENST00000493166 PARD3Q8TEW0 1356 aa17.26■□□□□ 0.35
CLIP2-209ENST00000493166 BCL9O00512 1426 aa17.25■□□□□ 0.35
CLIP2-209ENST00000493166 DDX54Q8TDD1 881 aaKnown RBP17.25■□□□□ 0.35
CLIP2-209ENST00000493166 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
CLIP2-209ENST00000493166 IL13P35225 146 aa17.24■□□□□ 0.35
CLIP2-209ENST00000493166 BTAF1O14981 1849 aa17.24■□□□□ 0.35
CLIP2-209ENST00000493166 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
CLIP2-209ENST00000493166 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
CLIP2-209ENST00000493166 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
CLIP2-209ENST00000493166 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
CLIP2-209ENST00000493166 VIRMAQ69YN4 1812 aaKnown RBP17.22■□□□□ 0.35
CLIP2-209ENST00000493166 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.35
CLIP2-209ENST00000493166 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.35
CLIP2-209ENST00000493166 ITGB4P16144 1822 aa17.21■□□□□ 0.35
CLIP2-209ENST00000493166 BAG6P46379 1132 aa17.21■□□□□ 0.35
CLIP2-209ENST00000493166 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.35
CLIP2-209ENST00000493166 KDRP35968 1356 aa17.2■□□□□ 0.34
CLIP2-209ENST00000493166 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
CLIP2-209ENST00000493166 SULT6B1Q6IMI4 303 aa17.2■□□□□ 0.34
CLIP2-209ENST00000493166 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
CLIP2-209ENST00000493166 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
CLIP2-209ENST00000493166 TOGARAM1Q9Y4F4 1720 aa17.2■□□□□ 0.34
CLIP2-209ENST00000493166 RREB1Q92766 1687 aa17.2■□□□□ 0.34
CLIP2-209ENST00000493166 APBA3O96018 575 aa17.19■□□□□ 0.34
CLIP2-209ENST00000493166 RALBP1Q15311 655 aa17.19■□□□□ 0.34
CLIP2-209ENST00000493166 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
CLIP2-209ENST00000493166 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
CLIP2-209ENST00000493166 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
CLIP2-209ENST00000493166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.34
CLIP2-209ENST00000493166 NUP188Q5SRE5 1749 aa17.16■□□□□ 0.34
CLIP2-209ENST00000493166 HMOX1P09601 288 aa17.16■□□□□ 0.34
CLIP2-209ENST00000493166 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
CLIP2-209ENST00000493166 CYP27B1O15528 508 aa17.15■□□□□ 0.34
CLIP2-209ENST00000493166 KCNQ2O43526 872 aa17.15■□□□□ 0.34
CLIP2-209ENST00000493166 PLEKHO1Q53GL0 409 aaPredicted RBP17.15■□□□□ 0.34
CLIP2-209ENST00000493166 PTF1AQ7RTS3 328 aa17.15■□□□□ 0.34
CLIP2-209ENST00000493166 NUDCQ9Y266 331 aa17.15■□□□□ 0.34
CLIP2-209ENST00000493166 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
CLIP2-209ENST00000493166 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
CLIP2-209ENST00000493166 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
CLIP2-209ENST00000493166 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
CLIP2-209ENST00000493166 SYTL4Q96C24 671 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-209ENST00000493166 PHKG2P15735 406 aa17.12■□□□□ 0.33
CLIP2-209ENST00000493166 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
CLIP2-209ENST00000493166 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
CLIP2-209ENST00000493166 LY75O60449 1722 aa17.12■□□□□ 0.33
CLIP2-209ENST00000493166 PRIM1P49642 420 aaKnown RBP17.11■□□□□ 0.33
CLIP2-209ENST00000493166 CAMKK2Q96RR4 588 aa17.11■□□□□ 0.33
CLIP2-209ENST00000493166 PRKRIP1Q9H875 184 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-209ENST00000493166 PLSCR1O15162 318 aa17.1■□□□□ 0.33
CLIP2-209ENST00000493166 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-209ENST00000493166 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLIP2-209ENST00000493166 NKX1-1Q15270 411 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-209ENST00000493166 C1orf141Q5JVX7 400 aa17.1■□□□□ 0.33
CLIP2-209ENST00000493166 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
CLIP2-209ENST00000493166 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.32
CLIP2-209ENST00000493166 RSPH6AQ9H0K4 717 aa17.07■□□□□ 0.32
CLIP2-209ENST00000493166 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
CLIP2-209ENST00000493166 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
CLIP2-209ENST00000493166 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
CLIP2-209ENST00000493166 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
CLIP2-209ENST00000493166 ADAMTS7Q9UKP4 1686 aa17.06■□□□□ 0.32
CLIP2-209ENST00000493166 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
CLIP2-209ENST00000493166 AKAP4Q5JQC9 854 aa17.05■□□□□ 0.32
CLIP2-209ENST00000493166 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
CLIP2-209ENST00000493166 SRCAPQ6ZRS2 3230 aa17.04■□□□□ 0.32
CLIP2-209ENST00000493166 FCHSD2O94868 740 aa17.04■□□□□ 0.32
CLIP2-209ENST00000493166 TXNRD1Q16881 649 aa17.04■□□□□ 0.32
CLIP2-209ENST00000493166 TMOD3Q9NYL9 352 aa17.04■□□□□ 0.32
CLIP2-209ENST00000493166 ANP32CO43423 234 aa17.03■□□□□ 0.32
CLIP2-209ENST00000493166 GAS2L2Q8NHY3 880 aa17.03■□□□□ 0.32
CLIP2-209ENST00000493166 C5P01031 1676 aa17.03■□□□□ 0.32
CLIP2-209ENST00000493166 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
CLIP2-209ENST00000493166 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.32
CLIP2-209ENST00000493166 PROM2Q8N271 834 aa17.02■□□□□ 0.32
CLIP2-209ENST00000493166 SIPA1L3O60292 1781 aaPredicted RBP17.02■□□□□ 0.31
CLIP2-209ENST00000493166 NEFMP07197 916 aa17.01■□□□□ 0.31
CLIP2-209ENST00000493166 PIGBQ92521 554 aa17.01■□□□□ 0.31
CLIP2-209ENST00000493166 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
CLIP2-209ENST00000493166 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
CLIP2-209ENST00000493166 MRC1P22897 1456 aa17■□□□□ 0.31
CLIP2-209ENST00000493166 CABP4P57796 275 aa17■□□□□ 0.31
CLIP2-209ENST00000493166 NBPF14Q5TI25 921 aa17■□□□□ 0.31
CLIP2-209ENST00000493166 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
CLIP2-209ENST00000493166 PALLDQ8WX93 1383 aa17■□□□□ 0.31
CLIP2-209ENST00000493166 WDR43Q15061 677 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLIP2-209ENST00000493166 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
CLIP2-209ENST00000493166 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
CLIP2-209ENST00000493166 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
CLIP2-209ENST00000493166 GNAT3A8MTJ3 354 aa16.98■□□□□ 0.31
CLIP2-209ENST00000493166 RNMTO43148 476 aaKnown RBP16.98■□□□□ 0.31
CLIP2-209ENST00000493166 SLC27A3Q5K4L6 730 aa16.98■□□□□ 0.31
CLIP2-209ENST00000493166 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
CLIP2-209ENST00000493166 MAPK8IP3Q9UPT6 1336 aa16.97■□□□□ 0.31
CLIP2-209ENST00000493166 PSDA5PKW4 1024 aaPredicted RBP16.97■□□□□ 0.31
CLIP2-209ENST00000493166 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
CLIP2-209ENST00000493166 LGR6Q9HBX8 967 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms