RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 MEGF6O75095 1541 aa12.43□□□□□ -0.42
CSTF1-206ENST00000493039 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
CSTF1-206ENST00000493039 RUNDC1Q96C34 613 aa12.43□□□□□ -0.42
CSTF1-206ENST00000493039 ATRNO75882 1429 aa12.43□□□□□ -0.42
CSTF1-206ENST00000493039 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
CSTF1-206ENST00000493039 QTRT2Q9H974 415 aaKnown RBP12.42□□□□□ -0.42
CSTF1-206ENST00000493039 DISP2A7MBM2 1401 aa12.42□□□□□ -0.42
CSTF1-206ENST00000493039 APAF1O14727 1248 aa12.42□□□□□ -0.42
CSTF1-206ENST00000493039 GJD4Q96KN9 370 aaPredicted RBP12.42□□□□□ -0.42
CSTF1-206ENST00000493039 MTHFSDQ2M296 383 aaKnown RBP12.41□□□□□ -0.42
CSTF1-206ENST00000493039 TRPC5Q9UL62 973 aaPredicted RBP12.41□□□□□ -0.42
CSTF1-206ENST00000493039 IL2RBP14784 551 aa12.41□□□□□ -0.42
CSTF1-206ENST00000493039 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
CSTF1-206ENST00000493039 THRAP3Q9Y2W1 955 aaKnown RBP12.41□□□□□ -0.42
CSTF1-206ENST00000493039 CCDC9Q9Y3X0 531 aaKnown RBP12.41□□□□□ -0.42
CSTF1-206ENST00000493039 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.42
CSTF1-206ENST00000493039 RAPGEF4Q8WZA2 1011 aa12.4□□□□□ -0.42
CSTF1-206ENST00000493039 RRP7AQ9Y3A4 280 aaKnown RBP12.4□□□□□ -0.42
CSTF1-206ENST00000493039 GLI3P10071 1580 aa12.4□□□□□ -0.43
CSTF1-206ENST00000493039 ONECUT3O60422 494 aaPredicted RBP12.39□□□□□ -0.43
CSTF1-206ENST00000493039 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
CSTF1-206ENST00000493039 OVOS2A0A0G2JMS6 1433 aa12.39□□□□□ -0.43
CSTF1-206ENST00000493039 TMPOP42166 694 aaKnown RBP12.39□□□□□ -0.43
CSTF1-206ENST00000493039 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
CSTF1-206ENST00000493039 CYP27B1O15528 508 aa12.38□□□□□ -0.43
CSTF1-206ENST00000493039 TATP17735 454 aaPredicted RBP12.38□□□□□ -0.43
CSTF1-206ENST00000493039 ZNF772Q68DY9 489 aaPredicted RBP12.38□□□□□ -0.43
CSTF1-206ENST00000493039 PNNQ9H307 717 aaKnown RBP12.38□□□□□ -0.43
CSTF1-206ENST00000493039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.434e-6■■■■□ 20.2
CSTF1-206ENST00000493039 NFE2L2Q16236 605 aa12.38□□□□□ -0.43
CSTF1-206ENST00000493039 PDE4CQ08493 712 aa12.37□□□□□ -0.43
CSTF1-206ENST00000493039 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
CSTF1-206ENST00000493039 PHF23Q9BUL5 403 aaPredicted RBP12.37□□□□□ -0.43
CSTF1-206ENST00000493039 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
CSTF1-206ENST00000493039 SALL2Q9Y467 1007 aaPredicted RBP12.37□□□□□ -0.43
CSTF1-206ENST00000493039 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
CSTF1-206ENST00000493039 EP400Q96L91 3159 aa12.37□□□□□ -0.43
CSTF1-206ENST00000493039 PLEKHO1Q53GL0 409 aaPredicted RBP12.37□□□□□ -0.43
CSTF1-206ENST00000493039 ZCRB1Q8TBF4 217 aaKnown RBP12.37□□□□□ -0.43
CSTF1-206ENST00000493039 HNRNPUQ00839 825 aaKnown RBP eCLIP12.36□□□□□ -0.43
CSTF1-206ENST00000493039 AMOTQ4VCS5 1084 aa12.36□□□□□ -0.43
CSTF1-206ENST00000493039 RIPK4P57078 832 aa12.35□□□□□ -0.43
CSTF1-206ENST00000493039 YTHDC1Q96MU7 727 aaKnown RBP12.35□□□□□ -0.43
CSTF1-206ENST00000493039 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
CSTF1-206ENST00000493039 PLEKHG2Q9H7P9 1386 aa12.35□□□□□ -0.43
CSTF1-206ENST00000493039 ZNF530Q6P9A1 599 aaPredicted RBP12.35□□□□□ -0.43
CSTF1-206ENST00000493039 CDCA7Q9BWT1 371 aaPredicted RBP12.35□□□□□ -0.43
CSTF1-206ENST00000493039 ZNF521Q96K83 1311 aa12.35□□□□□ -0.43
CSTF1-206ENST00000493039 PHKG2P15735 406 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 RBM6P78332 1123 aaKnown RBP12.34□□□□□ -0.43
CSTF1-206ENST00000493039 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 EXOC5O00471 708 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 WWC1Q8IX03 1113 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 SEPT12Q8IYM1 358 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
CSTF1-206ENST00000493039 NEFMP07197 916 aa12.33□□□□□ -0.44
CSTF1-206ENST00000493039 DDB1Q16531 1140 aa12.33□□□□□ -0.44
CSTF1-206ENST00000493039 MARCH10Q8NA82 808 aaPredicted RBP12.33□□□□□ -0.44
CSTF1-206ENST00000493039 DDX54Q8TDD1 881 aaKnown RBP12.33□□□□□ -0.44
CSTF1-206ENST00000493039 THUMPD2Q9BTF0 503 aaKnown RBP12.33□□□□□ -0.44
CSTF1-206ENST00000493039 PKD1L3Q7Z443 1732 aa12.33□□□□□ -0.44
CSTF1-206ENST00000493039 THSD7AQ9UPZ6 1657 aa12.33□□□□□ -0.44
CSTF1-206ENST00000493039 NEFLP07196 543 aa12.33□□□□□ -0.44
CSTF1-206ENST00000493039 CCDC27Q2M243 656 aa12.33□□□□□ -0.44
CSTF1-206ENST00000493039 AKAP4Q5JQC9 854 aa12.33□□□□□ -0.44
CSTF1-206ENST00000493039 MCM10Q7L590 875 aa12.33□□□□□ -0.44
CSTF1-206ENST00000493039 TNS2Q63HR2 1409 aa12.32□□□□□ -0.44
CSTF1-206ENST00000493039 GNAT3A8MTJ3 354 aa12.32□□□□□ -0.44
CSTF1-206ENST00000493039 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
CSTF1-206ENST00000493039 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
CSTF1-206ENST00000493039 MPRIPQ6WCQ1 1025 aa12.32□□□□□ -0.44
CSTF1-206ENST00000493039 IFNL2Q8IZJ0 200 aa12.32□□□□□ -0.44
CSTF1-206ENST00000493039 SHANK3Q9BYB0 1731 aa12.32□□□□□ -0.44
CSTF1-206ENST00000493039 RXRBP28702 533 aa12.31□□□□□ -0.44
CSTF1-206ENST00000493039 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
CSTF1-206ENST00000493039 PCDH11XQ9BZA7 1347 aa12.31□□□□□ -0.44
CSTF1-206ENST00000493039 PCDH11YQ9BZA8 1340 aa12.31□□□□□ -0.44
CSTF1-206ENST00000493039 PARP4Q9UKK3 1724 aaKnown RBP12.31□□□□□ -0.44
CSTF1-206ENST00000493039 MAP3K5Q99683 1374 aa12.31□□□□□ -0.44
CSTF1-206ENST00000493039 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
CSTF1-206ENST00000493039 KDM6AO15550 1401 aaPredicted RBP12.31□□□□□ -0.44
CSTF1-206ENST00000493039 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
CSTF1-206ENST00000493039 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
CSTF1-206ENST00000493039 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
CSTF1-206ENST00000493039 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
CSTF1-206ENST00000493039 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
CSTF1-206ENST00000493039 NGEFQ8N5V2 710 aa12.3□□□□□ -0.44
CSTF1-206ENST00000493039 ZBED9Q6R2W3 1325 aa12.3□□□□□ -0.44
CSTF1-206ENST00000493039 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
CSTF1-206ENST00000493039 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
CSTF1-206ENST00000493039 DLG5Q8TDM6 1919 aa12.29□□□□□ -0.44
CSTF1-206ENST00000493039 A0A0G2JS52 829 aa12.29□□□□□ -0.44
CSTF1-206ENST00000493039 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
CSTF1-206ENST00000493039 RGS12O14924 1447 aa12.27□□□□□ -0.44
CSTF1-206ENST00000493039 ADAMTS7Q9UKP4 1686 aa12.27□□□□□ -0.45
CSTF1-206ENST00000493039 PDE3BQ13370 1112 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms