RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 SSBP05455 408 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRIM11-204ENST00000493030 CCDC192P0DO97 292 aa16.11■□□□□ 0.17
TRIM11-204ENST00000493030 GNAT3A8MTJ3 354 aa16.11■□□□□ 0.17
TRIM11-204ENST00000493030 CALRP27797 417 aaKnown RBP16.11■□□□□ 0.17
TRIM11-204ENST00000493030 STIM1Q13586 685 aa16.11■□□□□ 0.17
TRIM11-204ENST00000493030 ERCC4Q92889 916 aaPredicted RBP16.11■□□□□ 0.17
TRIM11-204ENST00000493030 THUMPD2Q9BTF0 503 aaKnown RBP16.11■□□□□ 0.17
TRIM11-204ENST00000493030 PTCD1O75127 700 aaKnown RBP16.11■□□□□ 0.17
TRIM11-204ENST00000493030 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
TRIM11-204ENST00000493030 IGHMBP2P38935 993 aaKnown RBP16.1■□□□□ 0.17
TRIM11-204ENST00000493030 NOL7Q9UMY1 257 aaKnown RBP16.1■□□□□ 0.17
TRIM11-204ENST00000493030 NFE2L2Q16236 605 aa16.1■□□□□ 0.17
TRIM11-204ENST00000493030 RPGRIP1LQ68CZ1 1315 aa16.1■□□□□ 0.17
TRIM11-204ENST00000493030 DEF6Q9H4E7 631 aa16.1■□□□□ 0.17
TRIM11-204ENST00000493030 ABCF2Q9UG63 623 aa16.1■□□□□ 0.17
TRIM11-204ENST00000493030 TROQ12816 1431 aaPredicted RBP16.1■□□□□ 0.17
TRIM11-204ENST00000493030 MCM10Q7L590 875 aa16.1■□□□□ 0.17
TRIM11-204ENST00000493030 PPFIBP1Q86W92 1011 aa16.1■□□□□ 0.17
TRIM11-204ENST00000493030 CTNNA3Q9UI47 895 aa16.1■□□□□ 0.17
TRIM11-204ENST00000493030 EXOC6BQ9Y2D4 811 aa16.1■□□□□ 0.17
TRIM11-204ENST00000493030 CCP110O43303 1012 aa16.09■□□□□ 0.17
TRIM11-204ENST00000493030 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
TRIM11-204ENST00000493030 EHBP1L1Q8N3D4 1523 aa16.09■□□□□ 0.17
TRIM11-204ENST00000493030 TMPOP42166 694 aaKnown RBP16.09■□□□□ 0.17
TRIM11-204ENST00000493030 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
TRIM11-204ENST00000493030 NSD3Q9BZ95 1437 aa16.09■□□□□ 0.17
TRIM11-204ENST00000493030 CDKL5O76039 1030 aa16.09■□□□□ 0.17
TRIM11-204ENST00000493030 DACH1Q9UI36 760 aa16.09■□□□□ 0.17
TRIM11-204ENST00000493030 STARD3NLO95772 234 aa16.08■□□□□ 0.17
TRIM11-204ENST00000493030 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
TRIM11-204ENST00000493030 SPATA32Q96LK8 384 aa16.08■□□□□ 0.16
TRIM11-204ENST00000493030 CCDC184Q52MB2 194 aa16.08■□□□□ 0.16
TRIM11-204ENST00000493030 ANKRD30BQ9BXX2 1392 aa16.08■□□□□ 0.16
TRIM11-204ENST00000493030 AIDAQ96BJ3 306 aa16.08■□□□□ 0.16
TRIM11-204ENST00000493030 DCTN1Q14203 1278 aa16.07■□□□□ 0.16
TRIM11-204ENST00000493030 USP5P45974 858 aa16.07■□□□□ 0.16
TRIM11-204ENST00000493030 METTL24Q5JXM2 366 aa16.07■□□□□ 0.16
TRIM11-204ENST00000493030 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
TRIM11-204ENST00000493030 RPAP2Q8IXW5 612 aaPredicted RBP16.07■□□□□ 0.16
TRIM11-204ENST00000493030 BACH2Q9BYV9 841 aa16.06■□□□□ 0.16
TRIM11-204ENST00000493030 FAM177A1Q8N128 213 aaPredicted RBP16.06■□□□□ 0.16
TRIM11-204ENST00000493030 KCNH5Q8NCM2 988 aa16.06■□□□□ 0.16
TRIM11-204ENST00000493030 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
TRIM11-204ENST00000493030 NOM1Q5C9Z4 860 aaKnown RBP16.06■□□□□ 0.16
TRIM11-204ENST00000493030 USHBP1Q8N6Y0 703 aa16.06■□□□□ 0.16
TRIM11-204ENST00000493030 ZNF76P36508 570 aa16.06■□□□□ 0.16
TRIM11-204ENST00000493030 AXDND1Q5T1B0 1012 aaPredicted RBP16.06■□□□□ 0.16
TRIM11-204ENST00000493030 POGZQ7Z3K3 1410 aa16.06■□□□□ 0.16
TRIM11-204ENST00000493030 KRT32Q14532 448 aa16.05■□□□□ 0.16
TRIM11-204ENST00000493030 BMP2KQ9NSY1 1161 aaPredicted RBP16.05■□□□□ 0.16
TRIM11-204ENST00000493030 DAPK1P53355 1430 aa16.05■□□□□ 0.16
TRIM11-204ENST00000493030 H0YHG0 523 aa16.05■□□□□ 0.16
TRIM11-204ENST00000493030 CASTP20810 708 aaKnown RBP16.05■□□□□ 0.16
TRIM11-204ENST00000493030 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
TRIM11-204ENST00000493030 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
TRIM11-204ENST00000493030 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
TRIM11-204ENST00000493030 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
TRIM11-204ENST00000493030 LUC7LQ9NQ29 371 aaKnown RBP16.04■□□□□ 0.16
TRIM11-204ENST00000493030 SEPT11Q9NVA2 429 aaKnown RBP16.04■□□□□ 0.16
TRIM11-204ENST00000493030 TMOD3Q9NYL9 352 aa16.04■□□□□ 0.16
TRIM11-204ENST00000493030 NEFHP12036 1026 aa16.04■□□□□ 0.16
TRIM11-204ENST00000493030 CFAP45Q9UL16 551 aa16.04■□□□□ 0.16
TRIM11-204ENST00000493030 CCDC181Q5TID7 509 aa16.04■□□□□ 0.16
TRIM11-204ENST00000493030 BRPF3Q9ULD4 1205 aa16.04■□□□□ 0.16
TRIM11-204ENST00000493030 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
TRIM11-204ENST00000493030 SMARCA5O60264 1052 aaPredicted RBP16.03■□□□□ 0.16
TRIM11-204ENST00000493030 MYD88Q99836 296 aa16.03■□□□□ 0.16
TRIM11-204ENST00000493030 MAP7D2Q96T17 732 aa16.02■□□□□ 0.16
TRIM11-204ENST00000493030 SLFN5Q08AF3 891 aa16.02■□□□□ 0.16
TRIM11-204ENST00000493030 KIF1BPQ96EK5 621 aa16.02■□□□□ 0.15
TRIM11-204ENST00000493030 TMOD2Q9NZR1 351 aa16.02■□□□□ 0.15
TRIM11-204ENST00000493030 ERLIN2O94905 339 aa16.02■□□□□ 0.15
TRIM11-204ENST00000493030 MATR3P43243 847 aaKnown RBP eCLIP16.02■□□□□ 0.15
TRIM11-204ENST00000493030 NUP62CLQ9H1M0 184 aa16.02■□□□□ 0.15
TRIM11-204ENST00000493030 MINDY4BA8MYZ0 360 aa16.01■□□□□ 0.15
TRIM11-204ENST00000493030 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
TRIM11-204ENST00000493030 BOLA2Q9H3K6 86 aa16.01■□□□□ 0.15
TRIM11-204ENST00000493030 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
TRIM11-204ENST00000493030 ZPR1O75312 459 aa16.01■□□□□ 0.15
TRIM11-204ENST00000493030 MTERF4Q7Z6M4 381 aaKnown RBP16.01■□□□□ 0.15
TRIM11-204ENST00000493030 NME9Q86XW9 330 aa16.01■□□□□ 0.15
TRIM11-204ENST00000493030 MX1P20591 662 aa16.01■□□□□ 0.15
TRIM11-204ENST00000493030 WASF1Q92558 559 aa16.01■□□□□ 0.15
TRIM11-204ENST00000493030 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
TRIM11-204ENST00000493030 MPRIPQ6WCQ1 1025 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 FERMT3Q86UX7 667 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 CBFA2T2O43439 604 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 LARP1Q6PKG0 1096 aaKnown RBP16■□□□□ 0.15
TRIM11-204ENST00000493030 HECW1Q76N89 1606 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 ADAMTS2O95450 1211 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 AKAP2Q9Y2D5 859 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 CAVIN4Q5BKX8 364 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 PRPF40BQ6NWY9 871 aaKnown RBP16■□□□□ 0.15
TRIM11-204ENST00000493030 UPF3BQ9BZI7 483 aaKnown RBP16■□□□□ 0.15
TRIM11-204ENST00000493030 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 POLR3DP05423 398 aaPredicted RBP16■□□□□ 0.15
TRIM11-204ENST00000493030 FILIP1Q7Z7B0 1213 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
TRIM11-204ENST00000493030 HMGN5P82970 282 aaKnown RBP15.99■□□□□ 0.15
TRIM11-204ENST00000493030 CUL7Q14999 1698 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms