RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 HSP90AB2PQ58FF8 381 aa19.54■□□□□ 0.72
ATG3-206ENST00000492886 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
ATG3-206ENST00000492886 HSPA5P11021 654 aaKnown RBP19.53■□□□□ 0.72
ATG3-206ENST00000492886 EIF4G2P78344 907 aaKnown RBP eCLIP19.53■□□□□ 0.72
ATG3-206ENST00000492886 NSD2O96028 1365 aa19.53■□□□□ 0.72
ATG3-206ENST00000492886 CGNL1Q0VF96 1302 aa19.52■□□□□ 0.72
ATG3-206ENST00000492886 TUBGCP6Q96RT7 1819 aa19.52■□□□□ 0.72
ATG3-206ENST00000492886 COL24A1Q17RW2 1714 aa19.51■□□□□ 0.71
ATG3-206ENST00000492886 ZCRB1Q8TBF4 217 aaKnown RBP19.51■□□□□ 0.71
ATG3-206ENST00000492886 EMILIN1Q9Y6C2 1016 aa19.51■□□□□ 0.71
ATG3-206ENST00000492886 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
ATG3-206ENST00000492886 DDX54Q8TDD1 881 aaKnown RBP19.5■□□□□ 0.71
ATG3-206ENST00000492886 PDGFDQ9GZP0 370 aaPredicted RBP19.5■□□□□ 0.71
ATG3-206ENST00000492886 SPON1Q9HCB6 807 aa19.5■□□□□ 0.71
ATG3-206ENST00000492886 ITGB4P16144 1822 aa19.5■□□□□ 0.71
ATG3-206ENST00000492886 SLC15A2Q16348 729 aa19.49■□□□□ 0.71
ATG3-206ENST00000492886 USHBP1Q8N6Y0 703 aa19.48■□□□□ 0.71
ATG3-206ENST00000492886 WASHC2AQ641Q2 1341 aa19.48■□□□□ 0.71
ATG3-206ENST00000492886 LRRC4BQ9NT99 713 aa19.47■□□□□ 0.71
ATG3-206ENST00000492886 STK32BQ9NY57 414 aa19.47■□□□□ 0.71
ATG3-206ENST00000492886 PRIM1P49642 420 aaKnown RBP19.45■□□□□ 0.7
ATG3-206ENST00000492886 POLKQ9UBT6 870 aa19.45■□□□□ 0.7
ATG3-206ENST00000492886 TAF1LQ8IZX4 1826 aa19.45■□□□□ 0.7
ATG3-206ENST00000492886 RAPGEF4Q8WZA2 1011 aa19.44■□□□□ 0.7
ATG3-206ENST00000492886 TATP17735 454 aaPredicted RBP19.43■□□□□ 0.7
ATG3-206ENST00000492886 PTGER2P43116 358 aa19.43■□□□□ 0.7
ATG3-206ENST00000492886 ZNF827Q17R98 1081 aa19.43■□□□□ 0.7
ATG3-206ENST00000492886 SLC27A3Q5K4L6 730 aa19.43■□□□□ 0.7
ATG3-206ENST00000492886 C5P01031 1676 aa19.43■□□□□ 0.7
ATG3-206ENST00000492886 AKT1S1Q96B36 256 aa19.42■□□□□ 0.7
ATG3-206ENST00000492886 SGIP1Q9BQI5 828 aa19.42■□□□□ 0.7
ATG3-206ENST00000492886 PANK3Q9H999 370 aa19.42■□□□□ 0.7
ATG3-206ENST00000492886 PCDH11XQ9BZA7 1347 aa19.42■□□□□ 0.7
ATG3-206ENST00000492886 PCDH11YQ9BZA8 1340 aa19.42■□□□□ 0.7
ATG3-206ENST00000492886 PLEKHG2Q9H7P9 1386 aa19.41■□□□□ 0.7
ATG3-206ENST00000492886 CYP27B1O15528 508 aa19.4■□□□□ 0.7
ATG3-206ENST00000492886 EYA1Q99502 592 aa19.4■□□□□ 0.7
ATG3-206ENST00000492886 ZBTB7AO95365 584 aa19.39■□□□□ 0.69
ATG3-206ENST00000492886 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
ATG3-206ENST00000492886 NKX1-1Q15270 411 aaPredicted RBP19.38■□□□□ 0.69
ATG3-206ENST00000492886 SYTL4Q96C24 671 aaPredicted RBP19.38■□□□□ 0.69
ATG3-206ENST00000492886 MTFR1LQ9H019 292 aa19.38■□□□□ 0.69
ATG3-206ENST00000492886 PPM1GO15355 546 aaPredicted RBP19.37■□□□□ 0.69
ATG3-206ENST00000492886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.37■□□□□ 0.69
ATG3-206ENST00000492886 EIF4A2Q14240 407 aaKnown RBP19.36■□□□□ 0.69
ATG3-206ENST00000492886 PPP1R1BQ9UD71 204 aaPredicted RBP19.36■□□□□ 0.69
ATG3-206ENST00000492886 ATF5Q9Y2D1 282 aaPredicted RBP19.35■□□□□ 0.69
ATG3-206ENST00000492886 PNPLA7Q6ZV29 1317 aa19.34■□□□□ 0.69
ATG3-206ENST00000492886 IGSF1Q8N6C5 1336 aa19.34■□□□□ 0.69
ATG3-206ENST00000492886 KIF7Q2M1P5 1343 aa19.33■□□□□ 0.69
ATG3-206ENST00000492886 KCNQ4P56696 695 aa19.33■□□□□ 0.68
ATG3-206ENST00000492886 UBR3Q6ZT12 1888 aa19.33■□□□□ 0.68
ATG3-206ENST00000492886 C4BP0C0L5 1744 aa19.32■□□□□ 0.68
ATG3-206ENST00000492886 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
ATG3-206ENST00000492886 SLC16A10Q8TF71 515 aa19.32■□□□□ 0.68
ATG3-206ENST00000492886 MAP3K5Q99683 1374 aa19.32■□□□□ 0.68
ATG3-206ENST00000492886 ZNF831Q5JPB2 1677 aa19.31■□□□□ 0.68
ATG3-206ENST00000492886 AMER1Q5JTC6 1135 aaPredicted RBP19.31■□□□□ 0.68
ATG3-206ENST00000492886 CCNL1Q9UK58 526 aaPredicted RBP19.31■□□□□ 0.68
ATG3-206ENST00000492886 SPG7Q9UQ90 795 aa19.31■□□□□ 0.68
ATG3-206ENST00000492886 PALLDQ8WX93 1383 aa19.31■□□□□ 0.68
ATG3-206ENST00000492886 PHKG2P15735 406 aa19.29■□□□□ 0.68
ATG3-206ENST00000492886 PER1O15534 1290 aaPredicted RBP19.28■□□□□ 0.68
ATG3-206ENST00000492886 MPRIPQ6WCQ1 1025 aa19.28■□□□□ 0.68
ATG3-206ENST00000492886 KNSTRNQ9Y448 316 aa19.28■□□□□ 0.68
ATG3-206ENST00000492886 MORC1Q86VD1 984 aa19.27■□□□□ 0.68
ATG3-206ENST00000492886 IFNL2Q8IZJ0 200 aa19.27■□□□□ 0.68
ATG3-206ENST00000492886 PIGBQ92521 554 aa19.27■□□□□ 0.68
ATG3-206ENST00000492886 SYT17Q9BSW7 474 aa19.27■□□□□ 0.68
ATG3-206ENST00000492886 FHDC1Q9C0D6 1143 aaPredicted RBP19.27■□□□□ 0.68
ATG3-206ENST00000492886 VIRMAQ69YN4 1812 aaKnown RBP19.27■□□□□ 0.68
ATG3-206ENST00000492886 ARXQ96QS3 562 aa19.26■□□□□ 0.67
ATG3-206ENST00000492886 TFCP2L1Q9NZI6 479 aa19.26■□□□□ 0.67
ATG3-206ENST00000492886 KDRP35968 1356 aa19.26■□□□□ 0.67
ATG3-206ENST00000492886 SCN11AQ9UI33 1791 aa19.25■□□□□ 0.67
ATG3-206ENST00000492886 SMARCC1Q92922 1105 aaPredicted RBP19.25■□□□□ 0.67
ATG3-206ENST00000492886 CHD4Q14839 1912 aa19.25■□□□□ 0.67
ATG3-206ENST00000492886 COL5A3P25940 1745 aaPredicted RBP19.25■□□□□ 0.67
ATG3-206ENST00000492886 COL23A1Q86Y22 540 aaPredicted RBP19.24■□□□□ 0.67
ATG3-206ENST00000492886 HMGB2P26583 209 aaKnown RBP19.23■□□□□ 0.67
ATG3-206ENST00000492886 CICQ96RK0 1608 aaPredicted RBP19.22■□□□□ 0.67
ATG3-206ENST00000492886 NPC1L1Q9UHC9 1359 aa19.22■□□□□ 0.67
ATG3-206ENST00000492886 IL13P35225 146 aa19.22■□□□□ 0.67
ATG3-206ENST00000492886 KDM6AO15550 1401 aaPredicted RBP19.22■□□□□ 0.67
ATG3-206ENST00000492886 ADAMTS7Q9UKP4 1686 aa19.2■□□□□ 0.66
ATG3-206ENST00000492886 AEBP1Q8IUX7 1158 aa19.2■□□□□ 0.66
ATG3-206ENST00000492886 TMOD3Q9NYL9 352 aa19.2■□□□□ 0.66
ATG3-206ENST00000492886 AMOTQ4VCS5 1084 aa19.19■□□□□ 0.66
ATG3-206ENST00000492886 AMIGO3Q86WK7 504 aa19.19■□□□□ 0.66
ATG3-206ENST00000492886 ASAP1Q9ULH1 1129 aa19.19■□□□□ 0.66
ATG3-206ENST00000492886 COL3A1P02461 1466 aaPredicted RBP19.18■□□□□ 0.66
ATG3-206ENST00000492886 LOC102724428A0A0B4J2F2 783 aa19.18■□□□□ 0.66
ATG3-206ENST00000492886 ERVV-2B6SEH9 535 aa19.18■□□□□ 0.66
ATG3-206ENST00000492886 SIK1P57059 783 aa19.18■□□□□ 0.66
ATG3-206ENST00000492886 PLEKHO1Q53GL0 409 aaPredicted RBP19.18■□□□□ 0.66
ATG3-206ENST00000492886 DCAF5Q96JK2 942 aa19.18■□□□□ 0.66
ATG3-206ENST00000492886 ATG3Q9NT62 314 aa19.18■□□□□ 0.66
ATG3-206ENST00000492886 HSP90AB1P08238 724 aaKnown RBP19.17■□□□□ 0.66
ATG3-206ENST00000492886 POLD1P28340 1107 aa19.17■□□□□ 0.66
ATG3-206ENST00000492886 FLAD1Q8NFF5 587 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms