RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 PPP1R1BQ9UD71 204 aaPredicted RBP23.93■■□□□ 1.42
SGMS1-204ENST00000492601 FLT4P35916 1363 aa23.92■■□□□ 1.42
SGMS1-204ENST00000492601 INSRP06213 1382 aa23.91■■□□□ 1.42
SGMS1-204ENST00000492601 SLC15A2Q16348 729 aa23.91■■□□□ 1.42
SGMS1-204ENST00000492601 EMILIN1Q9Y6C2 1016 aa23.91■■□□□ 1.42
SGMS1-204ENST00000492601 PAPPAQ13219 1627 aa23.91■■□□□ 1.42
SGMS1-204ENST00000492601 ANKRD26Q9UPS8 1709 aa23.9■■□□□ 1.42
SGMS1-204ENST00000492601 HSPA5P11021 654 aaKnown RBP23.9■■□□□ 1.42
SGMS1-204ENST00000492601 EIF4G2P78344 907 aaKnown RBP eCLIP23.9■■□□□ 1.425e-9■■■□□ 17.2
SGMS1-204ENST00000492601 SYTL4Q96C24 671 aaPredicted RBP23.9■■□□□ 1.42
SGMS1-204ENST00000492601 ZBTB7AO95365 584 aa23.89■■□□□ 1.41
SGMS1-204ENST00000492601 PPM1GO15355 546 aaPredicted RBP23.88■■□□□ 1.41
SGMS1-204ENST00000492601 PRIM1P49642 420 aaKnown RBP23.88■■□□□ 1.41
SGMS1-204ENST00000492601 RAPGEF4Q8WZA2 1011 aa23.88■■□□□ 1.41
SGMS1-204ENST00000492601 KIF24Q5T7B8 1368 aa23.88■■□□□ 1.41
SGMS1-204ENST00000492601 CGNL1Q0VF96 1302 aa23.87■■□□□ 1.41
SGMS1-204ENST00000492601 LY75O60449 1722 aa23.87■■□□□ 1.41
SGMS1-204ENST00000492601 TATP17735 454 aaPredicted RBP23.85■■□□□ 1.41
SGMS1-204ENST00000492601 LRRC4BQ9NT99 713 aa23.85■■□□□ 1.41
SGMS1-204ENST00000492601 ATF5Q9Y2D1 282 aaPredicted RBP23.85■■□□□ 1.41
SGMS1-204ENST00000492601 TUBGCP6Q96RT7 1819 aa23.84■■□□□ 1.41
SGMS1-204ENST00000492601 NSD2O96028 1365 aa23.82■■□□□ 1.4
SGMS1-204ENST00000492601 ZNF827Q17R98 1081 aa23.82■■□□□ 1.4
SGMS1-204ENST00000492601 ITGB4P16144 1822 aa23.82■■□□□ 1.4
SGMS1-204ENST00000492601 PKD1L3Q7Z443 1732 aa23.81■■□□□ 1.4
SGMS1-204ENST00000492601 TNNT2P45379 298 aaPredicted RBP23.81■■□□□ 1.4
SGMS1-204ENST00000492601 KCNQ4P56696 695 aa23.81■■□□□ 1.4
SGMS1-204ENST00000492601 QSER1Q2KHR3 1735 aa23.81■■□□□ 1.4
SGMS1-204ENST00000492601 PTGER2P43116 358 aa23.8■■□□□ 1.4
SGMS1-204ENST00000492601 SLC27A3Q5K4L6 730 aa23.79■■□□□ 1.4
SGMS1-204ENST00000492601 PANK3Q9H999 370 aa23.79■■□□□ 1.4
SGMS1-204ENST00000492601 WASHC2AQ641Q2 1341 aa23.79■■□□□ 1.4
SGMS1-204ENST00000492601 PCDH11XQ9BZA7 1347 aa23.79■■□□□ 1.4
SGMS1-204ENST00000492601 PCDH11YQ9BZA8 1340 aa23.79■■□□□ 1.4
SGMS1-204ENST00000492601 TOGARAM1Q9Y4F4 1720 aa23.79■■□□□ 1.4
SGMS1-204ENST00000492601 MTFR1LQ9H019 292 aa23.78■■□□□ 1.4
SGMS1-204ENST00000492601 POLKQ9UBT6 870 aa23.78■■□□□ 1.4
SGMS1-204ENST00000492601 AKT1S1Q96B36 256 aa23.76■■□□□ 1.39
SGMS1-204ENST00000492601 CYP27B1O15528 508 aa23.75■■□□□ 1.39
SGMS1-204ENST00000492601 NCAPD2Q15021 1401 aa23.75■■□□□ 1.39
SGMS1-204ENST00000492601 EYA1Q99502 592 aa23.74■■□□□ 1.39
SGMS1-204ENST00000492601 TAF1LQ8IZX4 1826 aa23.73■■□□□ 1.39
SGMS1-204ENST00000492601 CCNL1Q9UK58 526 aaPredicted RBP23.73■■□□□ 1.39
SGMS1-204ENST00000492601 C5P01031 1676 aa23.73■■□□□ 1.39
SGMS1-204ENST00000492601 TFCP2L1Q9NZI6 479 aa23.72■■□□□ 1.39
SGMS1-204ENST00000492601 MPRIPQ6WCQ1 1025 aa23.71■■□□□ 1.39
SGMS1-204ENST00000492601 SGIP1Q9BQI5 828 aa23.71■■□□□ 1.39
SGMS1-204ENST00000492601 PNPLA7Q6ZV29 1317 aa23.7■■□□□ 1.38
SGMS1-204ENST00000492601 DCAF8L1A6NGE4 600 aa23.7■■□□□ 1.38
SGMS1-204ENST00000492601 EIF4A2Q14240 407 aaKnown RBP23.7■■□□□ 1.38
SGMS1-204ENST00000492601 FHDC1Q9C0D6 1143 aaPredicted RBP23.69■■□□□ 1.38
SGMS1-204ENST00000492601 SPG7Q9UQ90 795 aa23.69■■□□□ 1.38
SGMS1-204ENST00000492601 COL24A1Q17RW2 1714 aa23.68■■□□□ 1.38
SGMS1-204ENST00000492601 PALLDQ8WX93 1383 aa23.66■■□□□ 1.38
SGMS1-204ENST00000492601 MORC1Q86VD1 984 aa23.66■■□□□ 1.38
SGMS1-204ENST00000492601 ARXQ96QS3 562 aa23.66■■□□□ 1.38
SGMS1-204ENST00000492601 SYT17Q9BSW7 474 aa23.66■■□□□ 1.38
SGMS1-204ENST00000492601 UTRNP46939 3433 aa23.65■■□□□ 1.38
SGMS1-204ENST00000492601 SLC16A10Q8TF71 515 aa23.64■■□□□ 1.37
SGMS1-204ENST00000492601 KNSTRNQ9Y448 316 aa23.64■■□□□ 1.37
SGMS1-204ENST00000492601 NKX1-1Q15270 411 aaPredicted RBP23.63■■□□□ 1.37
SGMS1-204ENST00000492601 PIGBQ92521 554 aa23.63■■□□□ 1.37
SGMS1-204ENST00000492601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.63■■□□□ 1.37
SGMS1-204ENST00000492601 MSH5O43196 834 aa23.62■■□□□ 1.37
SGMS1-204ENST00000492601 YY1P25490 414 aa23.62■■□□□ 1.37
SGMS1-204ENST00000492601 KIF7Q2M1P5 1343 aa23.61■■□□□ 1.37
SGMS1-204ENST00000492601 C4BP0C0L5 1744 aa23.61■■□□□ 1.37
SGMS1-204ENST00000492601 IGSF1Q8N6C5 1336 aa23.6■■□□□ 1.37
SGMS1-204ENST00000492601 PHKG2P15735 406 aa23.6■■□□□ 1.37
SGMS1-204ENST00000492601 POLD1P28340 1107 aa23.6■■□□□ 1.37
SGMS1-204ENST00000492601 IFNL2Q8IZJ0 200 aa23.6■■□□□ 1.37
SGMS1-204ENST00000492601 SMARCC1Q92922 1105 aaPredicted RBP23.6■■□□□ 1.37
SGMS1-204ENST00000492601 CHD4Q14839 1912 aa23.59■■□□□ 1.37
SGMS1-204ENST00000492601 COL23A1Q86Y22 540 aaPredicted RBP23.59■■□□□ 1.37
SGMS1-204ENST00000492601 KLHL34Q8N239 644 aa23.59■■□□□ 1.37
SGMS1-204ENST00000492601 UBR3Q6ZT12 1888 aa23.59■■□□□ 1.37
SGMS1-204ENST00000492601 TMOD3Q9NYL9 352 aa23.58■■□□□ 1.37
SGMS1-204ENST00000492601 MAP3K5Q99683 1374 aa23.55■■□□□ 1.36
SGMS1-204ENST00000492601 AMER1Q5JTC6 1135 aaPredicted RBP23.55■■□□□ 1.36
SGMS1-204ENST00000492601 AEBP1Q8IUX7 1158 aa23.55■■□□□ 1.36
SGMS1-204ENST00000492601 MSL1Q68DK7 614 aa23.54■■□□□ 1.36
SGMS1-204ENST00000492601 ASAP1Q9ULH1 1129 aa23.54■■□□□ 1.36
SGMS1-204ENST00000492601 AK7Q96M32 723 aa23.53■■□□□ 1.36
SGMS1-204ENST00000492601 PLEKHG2Q9H7P9 1386 aa23.52■■□□□ 1.36
SGMS1-204ENST00000492601 GOLGB1Q14789 3259 aaKnown RBP23.52■■□□□ 1.36
SGMS1-204ENST00000492601 LOC102724428A0A0B4J2F2 783 aa23.52■■□□□ 1.36
SGMS1-204ENST00000492601 HMGB2P26583 209 aaKnown RBP23.52■■□□□ 1.36
SGMS1-204ENST00000492601 SIK1P57059 783 aa23.52■■□□□ 1.36
SGMS1-204ENST00000492601 PLEKHO1Q53GL0 409 aaPredicted RBP23.52■■□□□ 1.36
SGMS1-204ENST00000492601 VIRMAQ69YN4 1812 aaKnown RBP23.52■■□□□ 1.36
SGMS1-204ENST00000492601 ZNF530Q6P9A1 599 aaPredicted RBP23.51■■□□□ 1.35
SGMS1-204ENST00000492601 SULT6B1Q6IMI4 303 aa23.5■■□□□ 1.35
SGMS1-204ENST00000492601 SMIM5Q71RC9 77 aa23.5■■□□□ 1.35
SGMS1-204ENST00000492601 AMIGO3Q86WK7 504 aa23.5■■□□□ 1.35
SGMS1-204ENST00000492601 LINC00116Q8NCU8 138 aa23.5■■□□□ 1.35
SGMS1-204ENST00000492601 PHF14O94880 888 aa23.49■■□□□ 1.35
SGMS1-204ENST00000492601 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
SGMS1-204ENST00000492601 FLAD1Q8NFF5 587 aa23.49■■□□□ 1.35
SGMS1-204ENST00000492601 ATG3Q9NT62 314 aa23.49■■□□□ 1.35
SGMS1-204ENST00000492601 HSP90AB1P08238 724 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 868.4 ms