RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 SF3B2Q13435 895 aaKnown RBP34.88■■■■□ 3.17
TTC3-223ENST00000492275 DDX54Q8TDD1 881 aaKnown RBP34.88■■■■□ 3.17
TTC3-223ENST00000492275 PARD3Q8TEW0 1356 aa34.87■■■■□ 3.17
TTC3-223ENST00000492275 DEFB132Q7Z7B7 95 aa34.86■■■■□ 3.17
TTC3-223ENST00000492275 COL3A1P02461 1466 aaPredicted RBP34.85■■■■□ 3.17
TTC3-223ENST00000492275 KAT6BQ8WYB5 2073 aa34.84■■■■□ 3.17
TTC3-223ENST00000492275 PKD1L3Q7Z443 1732 aa34.84■■■■□ 3.17
TTC3-223ENST00000492275 DIAPH1O60610 1272 aaKnown RBP34.83■■■■□ 3.17
TTC3-223ENST00000492275 PTF1AQ7RTS3 328 aa34.82■■■■□ 3.16
TTC3-223ENST00000492275 AEBP1Q8IUX7 1158 aa34.82■■■■□ 3.16
TTC3-223ENST00000492275 SULT6B1Q6IMI4 303 aa34.79■■■■□ 3.16
TTC3-223ENST00000492275 BAG6P46379 1132 aa34.78■■■■□ 3.16
TTC3-223ENST00000492275 BCL11BQ9C0K0 894 aaPredicted RBP34.78■■■■□ 3.16
TTC3-223ENST00000492275 APBA3O96018 575 aa34.77■■■■□ 3.16
TTC3-223ENST00000492275 ACSBG1Q96GR2 724 aa34.77■■■■□ 3.16
TTC3-223ENST00000492275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.77■■■■□ 3.164e-8■■■□□ 17.8
TTC3-223ENST00000492275 KDRP35968 1356 aa34.76■■■■□ 3.16
TTC3-223ENST00000492275 CYP27B1O15528 508 aa34.76■■■■□ 3.16
TTC3-223ENST00000492275 KCNQ2O43526 872 aa34.76■■■■□ 3.16
TTC3-223ENST00000492275 PCDH11XQ9BZA7 1347 aa34.76■■■■□ 3.15
TTC3-223ENST00000492275 PCDH11YQ9BZA8 1340 aa34.76■■■■□ 3.15
TTC3-223ENST00000492275 EN1Q05925 392 aaPredicted RBP34.75■■■■□ 3.15
TTC3-223ENST00000492275 RALBP1Q15311 655 aa34.75■■■■□ 3.15
TTC3-223ENST00000492275 CFAP53Q96M91 514 aa34.75■■■■□ 3.15
TTC3-223ENST00000492275 SPG7Q9UQ90 795 aa34.75■■■■□ 3.15
TTC3-223ENST00000492275 NHSQ6T4R5 1651 aa34.75■■■■□ 3.15
TTC3-223ENST00000492275 PLEKHG2Q9H7P9 1386 aa34.72■■■■□ 3.15
TTC3-223ENST00000492275 HMOX1P09601 288 aa34.71■■■■□ 3.15
TTC3-223ENST00000492275 DOT1LQ8TEK3 1739 aa34.7■■■■□ 3.15
TTC3-223ENST00000492275 CAMKK2Q96RR4 588 aa34.7■■■■□ 3.15
TTC3-223ENST00000492275 U2SURPO15042 1029 aaKnown RBP34.68■■■■□ 3.14
TTC3-223ENST00000492275 EZH2Q15910 746 aaKnown RBP34.68■■■■□ 3.14
TTC3-223ENST00000492275 PLEKHO1Q53GL0 409 aaPredicted RBP34.67■■■■□ 3.14
TTC3-223ENST00000492275 PRIM1P49642 420 aaKnown RBP34.66■■■■□ 3.14
TTC3-223ENST00000492275 NKX1-1Q15270 411 aaPredicted RBP34.66■■■■□ 3.14
TTC3-223ENST00000492275 BTAF1O14981 1849 aa34.66■■■■□ 3.14
TTC3-223ENST00000492275 PHKG2P15735 406 aa34.65■■■■□ 3.14
TTC3-223ENST00000492275 PLSCR1O15162 318 aa34.64■■■■□ 3.14
TTC3-223ENST00000492275 AMOTQ4VCS5 1084 aa34.64■■■■□ 3.14
TTC3-223ENST00000492275 IFNL2Q8IZJ0 200 aa34.64■■■■□ 3.14
TTC3-223ENST00000492275 TOGARAM1Q9Y4F4 1720 aa34.62■■■■□ 3.13
TTC3-223ENST00000492275 PRKRIP1Q9H875 184 aaPredicted RBP34.62■■■■□ 3.13
TTC3-223ENST00000492275 NUDCQ9Y266 331 aa34.62■■■■□ 3.13
TTC3-223ENST00000492275 RGPD3A6NKT7 1758 aaPredicted RBP34.61■■■■□ 3.13
TTC3-223ENST00000492275 RGPD4Q7Z3J3 1758 aa34.61■■■■□ 3.13
TTC3-223ENST00000492275 ITGB4P16144 1822 aa34.6■■■■□ 3.13
TTC3-223ENST00000492275 MYBBP1AQ9BQG0 1328 aaKnown RBP34.6■■■■□ 3.13
TTC3-223ENST00000492275 SYTL4Q96C24 671 aaPredicted RBP34.59■■■■□ 3.13
TTC3-223ENST00000492275 RREB1Q92766 1687 aa34.59■■■■□ 3.13
TTC3-223ENST00000492275 ZNF530Q6P9A1 599 aaPredicted RBP34.58■■■■□ 3.13
TTC3-223ENST00000492275 PROM2Q8N271 834 aa34.56■■■■□ 3.12
TTC3-223ENST00000492275 U2AF1L5P0DN76 240 aaPredicted RBP34.55■■■■□ 3.12
TTC3-223ENST00000492275 U2AF1Q01081 240 aaKnown RBP eCLIP34.55■■■■□ 3.12
TTC3-223ENST00000492275 RSPH6AQ9H0K4 717 aa34.54■■■■□ 3.12
TTC3-223ENST00000492275 NUP188Q5SRE5 1749 aa34.53■■■■□ 3.12
TTC3-223ENST00000492275 MTHFSDQ2M296 383 aaKnown RBP34.52■■■■□ 3.12
TTC3-223ENST00000492275 HSP90AB1P08238 724 aaKnown RBP34.5■■■■□ 3.11
TTC3-223ENST00000492275 PRKAR2BP31323 418 aa34.5■■■■□ 3.11
TTC3-223ENST00000492275 C1orf141Q5JVX7 400 aa34.5■■■■□ 3.11
TTC3-223ENST00000492275 MPRIPQ6WCQ1 1025 aa34.5■■■■□ 3.11
TTC3-223ENST00000492275 TXNRD1Q16881 649 aa34.49■■■■□ 3.11
TTC3-223ENST00000492275 DCAF5Q96JK2 942 aa34.49■■■■□ 3.11
TTC3-223ENST00000492275 KDM6AO15550 1401 aaPredicted RBP34.48■■■■□ 3.11
TTC3-223ENST00000492275 FCHSD2O94868 740 aa34.48■■■■□ 3.11
TTC3-223ENST00000492275 AKAP4Q5JQC9 854 aa34.48■■■■□ 3.11
TTC3-223ENST00000492275 PHACTR3Q96KR7 559 aa34.48■■■■□ 3.11
TTC3-223ENST00000492275 PIGBQ92521 554 aa34.47■■■■□ 3.11
TTC3-223ENST00000492275 SCN11AQ9UI33 1791 aa34.46■■■■□ 3.11
TTC3-223ENST00000492275 VIRMAQ69YN4 1812 aaKnown RBP34.46■■■■□ 3.11
TTC3-223ENST00000492275 LY75O60449 1722 aa34.45■■■■□ 3.11
TTC3-223ENST00000492275 ERVV-2B6SEH9 535 aa34.44■■■■□ 3.1
TTC3-223ENST00000492275 TMOD3Q9NYL9 352 aa34.42■■■■□ 3.1
TTC3-223ENST00000492275 LGR6Q9HBX8 967 aa34.4■■■■□ 3.1
TTC3-223ENST00000492275 GAS2L2Q8NHY3 880 aa34.39■■■■□ 3.1
TTC3-223ENST00000492275 LRRC4BQ9NT99 713 aa34.39■■■■□ 3.1
TTC3-223ENST00000492275 ADAMTS7Q9UKP4 1686 aa34.37■■■■□ 3.09
TTC3-223ENST00000492275 RNMTO43148 476 aaKnown RBP34.36■■■■□ 3.09
TTC3-223ENST00000492275 CABP4P57796 275 aa34.36■■■■□ 3.09
TTC3-223ENST00000492275 PLEKHF1Q96S99 279 aa34.36■■■■□ 3.09
TTC3-223ENST00000492275 KCNQ4P56696 695 aa34.35■■■■□ 3.09
TTC3-223ENST00000492275 SLC27A3Q5K4L6 730 aa34.35■■■■□ 3.09
TTC3-223ENST00000492275 NBPF14Q5TI25 921 aa34.35■■■■□ 3.09
TTC3-223ENST00000492275 ASAP1Q9ULH1 1129 aa34.35■■■■□ 3.09
TTC3-223ENST00000492275 PALLDQ8WX93 1383 aa34.35■■■■□ 3.09
TTC3-223ENST00000492275 PSDA5PKW4 1024 aaPredicted RBP34.34■■■■□ 3.09
TTC3-223ENST00000492275 ANP32CO43423 234 aa34.34■■■■□ 3.09
TTC3-223ENST00000492275 SMARCC1Q92922 1105 aaPredicted RBP34.34■■■■□ 3.09
TTC3-223ENST00000492275 ANO8Q9HCE9 1232 aaPredicted RBP34.34■■■■□ 3.09
TTC3-223ENST00000492275 R3HDM1Q15032 1099 aaKnown RBP34.33■■■■□ 3.09
TTC3-223ENST00000492275 NFATC2IPQ8NCF5 419 aa34.33■■■■□ 3.09
TTC3-223ENST00000492275 ATG3Q9NT62 314 aa34.33■■■■□ 3.09
TTC3-223ENST00000492275 MAP3K5Q99683 1374 aa34.33■■■■□ 3.09
TTC3-223ENST00000492275 GNAT3A8MTJ3 354 aa34.32■■■■□ 3.08
TTC3-223ENST00000492275 PAPPAQ13219 1627 aa34.32■■■■□ 3.08
TTC3-223ENST00000492275 CCDC184Q52MB2 194 aa34.31■■■■□ 3.08
TTC3-223ENST00000492275 IL17REQ8NFR9 667 aa34.3■■■■□ 3.08
TTC3-223ENST00000492275 CCNL1Q9UK58 526 aaPredicted RBP34.3■■■■□ 3.08
TTC3-223ENST00000492275 SLC52A2Q9HAB3 445 aa34.29■■■■□ 3.08
TTC3-223ENST00000492275 PNNQ9H307 717 aaKnown RBP34.28■■■■□ 3.08
TTC3-223ENST00000492275 DLG5Q8TDM6 1919 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms