RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 NBPF4Q96M43 638 aa17.99■□□□□ 0.47
NUP188-208ENST00000491502 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
NUP188-208ENST00000491502 POLKQ9UBT6 870 aa17.99■□□□□ 0.47
NUP188-208ENST00000491502 EZH2Q15910 746 aaKnown RBP17.98■□□□□ 0.47
NUP188-208ENST00000491502 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
NUP188-208ENST00000491502 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
NUP188-208ENST00000491502 ANKRD26Q9UPS8 1709 aa17.98■□□□□ 0.47
NUP188-208ENST00000491502 PLSCR1O15162 318 aa17.97■□□□□ 0.47
NUP188-208ENST00000491502 TNNT2P45379 298 aaPredicted RBP17.97■□□□□ 0.47
NUP188-208ENST00000491502 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
NUP188-208ENST00000491502 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
NUP188-208ENST00000491502 ZCRB1Q8TBF4 217 aaKnown RBP17.96■□□□□ 0.47
NUP188-208ENST00000491502 SBF2Q86WG5 1849 aa17.95■□□□□ 0.46
NUP188-208ENST00000491502 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
NUP188-208ENST00000491502 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
NUP188-208ENST00000491502 DDX54Q8TDD1 881 aaKnown RBP17.94■□□□□ 0.46
NUP188-208ENST00000491502 RGPD2P0DJD1 1756 aa17.94■□□□□ 0.46
NUP188-208ENST00000491502 USHBP1Q8N6Y0 703 aa17.93■□□□□ 0.46
NUP188-208ENST00000491502 NBPF14Q5TI25 921 aa17.92■□□□□ 0.46
NUP188-208ENST00000491502 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.46
NUP188-208ENST00000491502 ACSBG1Q96GR2 724 aa17.9■□□□□ 0.46
NUP188-208ENST00000491502 EYA1Q99502 592 aa17.9■□□□□ 0.46
NUP188-208ENST00000491502 KAT6BQ8WYB5 2073 aa17.89■□□□□ 0.45
NUP188-208ENST00000491502 MEGF6O75095 1541 aa17.89■□□□□ 0.45
NUP188-208ENST00000491502 KCNQ2O43526 872 aa17.89■□□□□ 0.45
NUP188-208ENST00000491502 MTHFSP49914 203 aa17.89■□□□□ 0.45
NUP188-208ENST00000491502 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
NUP188-208ENST00000491502 PTF1AQ7RTS3 328 aa17.89■□□□□ 0.45
NUP188-208ENST00000491502 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
NUP188-208ENST00000491502 RGPD3A6NKT7 1758 aaPredicted RBP17.87■□□□□ 0.45
NUP188-208ENST00000491502 RGPD4Q7Z3J3 1758 aa17.87■□□□□ 0.45
NUP188-208ENST00000491502 NCAPD2Q15021 1401 aa17.87■□□□□ 0.45
NUP188-208ENST00000491502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.45
NUP188-208ENST00000491502 SPG7Q9UQ90 795 aa17.86■□□□□ 0.45
NUP188-208ENST00000491502 PCDH11XQ9BZA7 1347 aa17.86■□□□□ 0.45
NUP188-208ENST00000491502 PCDH11YQ9BZA8 1340 aa17.86■□□□□ 0.45
NUP188-208ENST00000491502 NHSQ6T4R5 1651 aa17.86■□□□□ 0.45
NUP188-208ENST00000491502 RREB1Q92766 1687 aa17.86■□□□□ 0.45
NUP188-208ENST00000491502 PSDA5PKW4 1024 aaPredicted RBP17.85■□□□□ 0.45
NUP188-208ENST00000491502 R3HDM1Q15032 1099 aaKnown RBP17.85■□□□□ 0.45
NUP188-208ENST00000491502 TXNRD1Q16881 649 aa17.84■□□□□ 0.45
NUP188-208ENST00000491502 PROM2Q8N271 834 aa17.84■□□□□ 0.45
NUP188-208ENST00000491502 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
NUP188-208ENST00000491502 PLEKHG2Q9H7P9 1386 aa17.83■□□□□ 0.45
NUP188-208ENST00000491502 ZBED9Q6R2W3 1325 aa17.83■□□□□ 0.44
NUP188-208ENST00000491502 PRIM1P49642 420 aaKnown RBP17.83■□□□□ 0.44
NUP188-208ENST00000491502 IGSF1Q8N6C5 1336 aa17.82■□□□□ 0.44
NUP188-208ENST00000491502 NUP188Q5SRE5 1749 aa17.82■□□□□ 0.44
NUP188-208ENST00000491502 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
NUP188-208ENST00000491502 SYTL4Q96C24 671 aaPredicted RBP17.82■□□□□ 0.44
NUP188-208ENST00000491502 ADAMTS8Q9UP79 889 aa17.81■□□□□ 0.44
NUP188-208ENST00000491502 SHANK3Q9BYB0 1731 aa17.81■□□□□ 0.44
NUP188-208ENST00000491502 CYP27B1O15528 508 aa17.8■□□□□ 0.44
NUP188-208ENST00000491502 DIAPH1O60610 1272 aaKnown RBP17.8■□□□□ 0.44
NUP188-208ENST00000491502 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
NUP188-208ENST00000491502 IL13P35225 146 aa17.79■□□□□ 0.44
NUP188-208ENST00000491502 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
NUP188-208ENST00000491502 BTAF1O14981 1849 aa17.79■□□□□ 0.44
NUP188-208ENST00000491502 HMGB2P26583 209 aaKnown RBP17.78■□□□□ 0.44
NUP188-208ENST00000491502 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
NUP188-208ENST00000491502 PLEKHO1Q53GL0 409 aaPredicted RBP17.78■□□□□ 0.44
NUP188-208ENST00000491502 SLC27A3Q5K4L6 730 aa17.78■□□□□ 0.44
NUP188-208ENST00000491502 STK32BQ9NY57 414 aa17.78■□□□□ 0.44
NUP188-208ENST00000491502 PKD1L3Q7Z443 1732 aa17.78■□□□□ 0.44
NUP188-208ENST00000491502 NEFMP07197 916 aa17.76■□□□□ 0.43
NUP188-208ENST00000491502 DOT1LQ8TEK3 1739 aa17.75■□□□□ 0.43
NUP188-208ENST00000491502 HSP90AB1P08238 724 aaKnown RBP17.75■□□□□ 0.43
NUP188-208ENST00000491502 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
NUP188-208ENST00000491502 PHKG2P15735 406 aa17.75■□□□□ 0.43
NUP188-208ENST00000491502 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.432e-6■□□□□ 9.8
NUP188-208ENST00000491502 SLC15A2Q16348 729 aa17.75■□□□□ 0.43
NUP188-208ENST00000491502 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
NUP188-208ENST00000491502 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
NUP188-208ENST00000491502 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
NUP188-208ENST00000491502 MPRIPQ6WCQ1 1025 aa17.73■□□□□ 0.43
NUP188-208ENST00000491502 SMARCC1Q92922 1105 aaPredicted RBP17.73■□□□□ 0.43
NUP188-208ENST00000491502 RUNDC1Q96C34 613 aa17.73■□□□□ 0.43
NUP188-208ENST00000491502 KDRP35968 1356 aa17.73■□□□□ 0.43
NUP188-208ENST00000491502 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
NUP188-208ENST00000491502 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
NUP188-208ENST00000491502 LRRC4BQ9NT99 713 aa17.72■□□□□ 0.43
NUP188-208ENST00000491502 ZNF530Q6P9A1 599 aaPredicted RBP17.71■□□□□ 0.43
NUP188-208ENST00000491502 DCAF5Q96JK2 942 aa17.71■□□□□ 0.43
NUP188-208ENST00000491502 LRP5O75197 1615 aa17.71■□□□□ 0.43
NUP188-208ENST00000491502 ERVV-2B6SEH9 535 aa17.7■□□□□ 0.42
NUP188-208ENST00000491502 FCHSD2O94868 740 aa17.7■□□□□ 0.42
NUP188-208ENST00000491502 C1orf141Q5JVX7 400 aa17.7■□□□□ 0.42
NUP188-208ENST00000491502 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
NUP188-208ENST00000491502 TMOD3Q9NYL9 352 aa17.7■□□□□ 0.42
NUP188-208ENST00000491502 CCNL1Q9UK58 526 aaPredicted RBP17.7■□□□□ 0.42
NUP188-208ENST00000491502 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
NUP188-208ENST00000491502 PIGBQ92521 554 aa17.69■□□□□ 0.42
NUP188-208ENST00000491502 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
NUP188-208ENST00000491502 ITGB4P16144 1822 aa17.68■□□□□ 0.42
NUP188-208ENST00000491502 LY75O60449 1722 aa17.67■□□□□ 0.42
NUP188-208ENST00000491502 HMOX1P09601 288 aa17.67■□□□□ 0.42
NUP188-208ENST00000491502 AKT1S1Q96B36 256 aa17.67■□□□□ 0.42
NUP188-208ENST00000491502 PALLDQ8WX93 1383 aa17.66■□□□□ 0.42
NUP188-208ENST00000491502 SRCAPQ6ZRS2 3230 aa17.66■□□□□ 0.42
NUP188-208ENST00000491502 CCDC146Q8IYE0 955 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms