RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 KCNQ4P56696 695 aa11.55□□□□□ -0.56
SMG5-205ENST00000489907 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
SMG5-205ENST00000489907 DDX54Q8TDD1 881 aaKnown RBP11.55□□□□□ -0.56
SMG5-205ENST00000489907 MEGF6O75095 1541 aa11.55□□□□□ -0.56
SMG5-205ENST00000489907 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
SMG5-205ENST00000489907 SLC16A10Q8TF71 515 aa11.54□□□□□ -0.56
SMG5-205ENST00000489907 FYB1O15117 783 aa11.53□□□□□ -0.56
SMG5-205ENST00000489907 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
SMG5-205ENST00000489907 LTV1Q96GA3 475 aaPredicted RBP11.53□□□□□ -0.56
SMG5-205ENST00000489907 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
SMG5-205ENST00000489907 TAF1LQ8IZX4 1826 aa11.52□□□□□ -0.57
SMG5-205ENST00000489907 ZCRB1Q8TBF4 217 aaKnown RBP11.52□□□□□ -0.57
SMG5-205ENST00000489907 GOLGB1Q14789 3259 aaKnown RBP11.52□□□□□ -0.57
SMG5-205ENST00000489907 COG3Q96JB2 828 aa11.51□□□□□ -0.57
SMG5-205ENST00000489907 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
SMG5-205ENST00000489907 RRS1Q15050 365 aaKnown RBP11.5□□□□□ -0.57
SMG5-205ENST00000489907 ITGB4P16144 1822 aa11.5□□□□□ -0.57
SMG5-205ENST00000489907 C5P01031 1676 aa11.49□□□□□ -0.57
SMG5-205ENST00000489907 TOGARAM1Q9Y4F4 1720 aa11.49□□□□□ -0.57
SMG5-205ENST00000489907 AMPHP49418 695 aa11.49□□□□□ -0.57
SMG5-205ENST00000489907 COL23A1Q86Y22 540 aaPredicted RBP11.49□□□□□ -0.57
SMG5-205ENST00000489907 NLGN2Q8NFZ4 835 aa11.49□□□□□ -0.57
SMG5-205ENST00000489907 GGNBP2Q9H3C7 697 aa11.49□□□□□ -0.57
SMG5-205ENST00000489907 RTL1A6NKG5 1358 aa11.49□□□□□ -0.57
SMG5-205ENST00000489907 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
SMG5-205ENST00000489907 HSP90AB2PQ58FF8 381 aa11.48□□□□□ -0.57
SMG5-205ENST00000489907 USHBP1Q8N6Y0 703 aa11.48□□□□□ -0.57
SMG5-205ENST00000489907 SYTL4Q96C24 671 aaPredicted RBP11.48□□□□□ -0.57
SMG5-205ENST00000489907 TFCP2L1Q9NZI6 479 aa11.48□□□□□ -0.57
SMG5-205ENST00000489907 MAP2P11137 1827 aaKnown RBP11.47□□□□□ -0.57
SMG5-205ENST00000489907 NCAPD2Q15021 1401 aa11.47□□□□□ -0.57
SMG5-205ENST00000489907 INSRP06213 1382 aa11.47□□□□□ -0.57
SMG5-205ENST00000489907 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
SMG5-205ENST00000489907 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
SMG5-205ENST00000489907 C1QTNF8P60827 252 aa11.47□□□□□ -0.57
SMG5-205ENST00000489907 CARD14Q9BXL6 1004 aa11.47□□□□□ -0.57
SMG5-205ENST00000489907 PKD1L3Q7Z443 1732 aa11.46□□□□□ -0.57
SMG5-205ENST00000489907 CYP27B1O15528 508 aa11.46□□□□□ -0.57
SMG5-205ENST00000489907 GPR162Q16538 588 aa11.46□□□□□ -0.57
SMG5-205ENST00000489907 CCNL1Q9UK58 526 aaPredicted RBP11.46□□□□□ -0.57
SMG5-205ENST00000489907 ANKRD26Q9UPS8 1709 aa11.46□□□□□ -0.58
SMG5-205ENST00000489907 UBR3Q6ZT12 1888 aa11.45□□□□□ -0.58
SMG5-205ENST00000489907 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMG5-205ENST00000489907 POLD1P28340 1107 aa11.45□□□□□ -0.58
SMG5-205ENST00000489907 AMIGO3Q86WK7 504 aa11.45□□□□□ -0.58
SMG5-205ENST00000489907 KIF24Q5T7B8 1368 aa11.44□□□□□ -0.58
SMG5-205ENST00000489907 USP47Q96K76 1375 aa11.44□□□□□ -0.58
SMG5-205ENST00000489907 C4BP0C0L5 1744 aa11.43□□□□□ -0.58
SMG5-205ENST00000489907 TMF1P82094 1093 aa11.43□□□□□ -0.58
SMG5-205ENST00000489907 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
SMG5-205ENST00000489907 FLT4P35916 1363 aa11.42□□□□□ -0.58
SMG5-205ENST00000489907 TATP17735 454 aaPredicted RBP11.42□□□□□ -0.58
SMG5-205ENST00000489907 RAPGEF4Q8WZA2 1011 aa11.42□□□□□ -0.58
SMG5-205ENST00000489907 PCDH11XQ9BZA7 1347 aa11.41□□□□□ -0.58
SMG5-205ENST00000489907 PCDH11YQ9BZA8 1340 aa11.41□□□□□ -0.58
SMG5-205ENST00000489907 SMIM5Q71RC9 77 aa11.41□□□□□ -0.58
SMG5-205ENST00000489907 KLHL34Q8N239 644 aa11.41□□□□□ -0.58
SMG5-205ENST00000489907 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
SMG5-205ENST00000489907 PALLDQ8WX93 1383 aa11.41□□□□□ -0.58
SMG5-205ENST00000489907 MSL1Q68DK7 614 aa11.4□□□□□ -0.58
SMG5-205ENST00000489907 MPRIPQ6WCQ1 1025 aa11.4□□□□□ -0.58
SMG5-205ENST00000489907 PIGBQ92521 554 aa11.4□□□□□ -0.58
SMG5-205ENST00000489907 CD2APQ9Y5K6 639 aa11.4□□□□□ -0.58
SMG5-205ENST00000489907 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.58
SMG5-205ENST00000489907 WASHC2AQ641Q2 1341 aa11.39□□□□□ -0.59
SMG5-205ENST00000489907 GRIN3BO60391 1043 aa11.39□□□□□ -0.59
SMG5-205ENST00000489907 KIAA1551Q9HCM1 1747 aa11.38□□□□□ -0.59
SMG5-205ENST00000489907 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
SMG5-205ENST00000489907 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
SMG5-205ENST00000489907 FLAD1Q8NFF5 587 aa11.38□□□□□ -0.59
SMG5-205ENST00000489907 EYA1Q99502 592 aa11.38□□□□□ -0.59
SMG5-205ENST00000489907 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
SMG5-205ENST00000489907 NSD3Q9BZ95 1437 aa11.37□□□□□ -0.59
SMG5-205ENST00000489907 MSH5O43196 834 aa11.37□□□□□ -0.59
SMG5-205ENST00000489907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMG5-205ENST00000489907 POLKQ9UBT6 870 aa11.37□□□□□ -0.59
SMG5-205ENST00000489907 ADCY9O60503 1353 aa11.37□□□□□ -0.59
SMG5-205ENST00000489907 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
SMG5-205ENST00000489907 GIGYF1O75420 1035 aaPredicted RBP11.36□□□□□ -0.59
SMG5-205ENST00000489907 ITPK1Q13572 414 aa11.36□□□□□ -0.59
SMG5-205ENST00000489907 LINC00116Q8NCU8 138 aa11.36□□□□□ -0.59
SMG5-205ENST00000489907 SMARCC1Q92922 1105 aaPredicted RBP11.36□□□□□ -0.59
SMG5-205ENST00000489907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.35□□□□□ -0.59
SMG5-205ENST00000489907 LOC102724428A0A0B4J2F2 783 aa11.35□□□□□ -0.59
SMG5-205ENST00000489907 PHKG2P15735 406 aa11.35□□□□□ -0.59
SMG5-205ENST00000489907 SIK1P57059 783 aa11.35□□□□□ -0.59
SMG5-205ENST00000489907 CDCA8Q53HL2 280 aa11.35□□□□□ -0.59
SMG5-205ENST00000489907 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
SMG5-205ENST00000489907 ASAP1Q9ULH1 1129 aa11.35□□□□□ -0.59
SMG5-205ENST00000489907 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
SMG5-205ENST00000489907 HMGB2P26583 209 aaKnown RBP11.34□□□□□ -0.59
SMG5-205ENST00000489907 SSFA2P28290 1259 aa11.34□□□□□ -0.59
SMG5-205ENST00000489907 ATG3Q9NT62 314 aa11.34□□□□□ -0.59
SMG5-205ENST00000489907 COL5A3P25940 1745 aaPredicted RBP11.34□□□□□ -0.59
SMG5-205ENST00000489907 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
SMG5-205ENST00000489907 SPG7Q9UQ90 795 aa11.33□□□□□ -0.6
SMG5-205ENST00000489907 MYH14Q7Z406 1995 aaKnown RBP11.33□□□□□ -0.6
SMG5-205ENST00000489907 KDRP35968 1356 aa11.32□□□□□ -0.6
SMG5-205ENST00000489907 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
SMG5-205ENST00000489907 CICQ96RK0 1608 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms