RNA–Protein interactions for RNA: ENST00000489906.5

VDAC1-206, Transcript of voltage dependent anion channel 1, humanhuman

TSL 2

Gene VDAC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-206ENST00000489906 MSH5O43196 834 aa17.79■□□□□ 0.44
VDAC1-206ENST00000489906 POLD1P28340 1107 aa17.79■□□□□ 0.44
VDAC1-206ENST00000489906 RRS1Q15050 365 aaKnown RBP17.79■□□□□ 0.44
VDAC1-206ENST00000489906 SLC27A3Q5K4L6 730 aa17.79■□□□□ 0.44
VDAC1-206ENST00000489906 TUBGCP6Q96RT7 1819 aa17.79■□□□□ 0.44
VDAC1-206ENST00000489906 NLGN2Q8NFZ4 835 aa17.78■□□□□ 0.44
VDAC1-206ENST00000489906 ZCRB1Q8TBF4 217 aaKnown RBP17.78■□□□□ 0.44
VDAC1-206ENST00000489906 TESK2Q96S53 571 aa17.78■□□□□ 0.44
VDAC1-206ENST00000489906 NSD2O96028 1365 aa17.78■□□□□ 0.44
VDAC1-206ENST00000489906 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
VDAC1-206ENST00000489906 FAM208AQ9UK61 1670 aaKnown RBP17.77■□□□□ 0.44
VDAC1-206ENST00000489906 SENP3-EIF4A1A0A087X0R7 540 aa17.77■□□□□ 0.44
VDAC1-206ENST00000489906 MAP3K5Q99683 1374 aa17.77■□□□□ 0.43
VDAC1-206ENST00000489906 GGNBP2Q9H3C7 697 aa17.76■□□□□ 0.43
VDAC1-206ENST00000489906 CCNL1Q9UK58 526 aaPredicted RBP17.76■□□□□ 0.43
VDAC1-206ENST00000489906 SHANK3Q9BYB0 1731 aa17.75■□□□□ 0.43
VDAC1-206ENST00000489906 NBPF6Q5VWK0 638 aa17.75■□□□□ 0.43
VDAC1-206ENST00000489906 MSL1Q68DK7 614 aa17.75■□□□□ 0.43
VDAC1-206ENST00000489906 SLC16A10Q8TF71 515 aa17.75■□□□□ 0.43
VDAC1-206ENST00000489906 NBPF4Q96M43 638 aa17.75■□□□□ 0.43
VDAC1-206ENST00000489906 PUS7Q96PZ0 661 aaKnown RBP17.74■□□□□ 0.43
VDAC1-206ENST00000489906 QSER1Q2KHR3 1735 aa17.73■□□□□ 0.43
VDAC1-206ENST00000489906 C1QTNF8P60827 252 aa17.73■□□□□ 0.43
VDAC1-206ENST00000489906 LY75O60449 1722 aa17.72■□□□□ 0.43
VDAC1-206ENST00000489906 COL23A1Q86Y22 540 aaPredicted RBP17.72■□□□□ 0.43
VDAC1-206ENST00000489906 USP47Q96K76 1375 aa17.71■□□□□ 0.43
VDAC1-206ENST00000489906 FYB1O15117 783 aa17.7■□□□□ 0.42
VDAC1-206ENST00000489906 HSP90AB2PQ58FF8 381 aa17.7■□□□□ 0.42
VDAC1-206ENST00000489906 RAPGEF4Q8WZA2 1011 aa17.7■□□□□ 0.42
VDAC1-206ENST00000489906 YBX3P16989 372 aaKnown RBP eCLIP17.69■□□□□ 0.423e-10■□□□□ 9.1
VDAC1-206ENST00000489906 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
VDAC1-206ENST00000489906 TATP17735 454 aaPredicted RBP17.68■□□□□ 0.42
VDAC1-206ENST00000489906 COL24A1Q17RW2 1714 aa17.68■□□□□ 0.42
VDAC1-206ENST00000489906 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
VDAC1-206ENST00000489906 SMG6Q86US8 1419 aaKnown RBP17.67■□□□□ 0.42
VDAC1-206ENST00000489906 GIGYF1O75420 1035 aaPredicted RBP17.67■□□□□ 0.42
VDAC1-206ENST00000489906 SMIM5Q71RC9 77 aa17.67■□□□□ 0.42
VDAC1-206ENST00000489906 WWC3Q9ULE0 1092 aa17.66■□□□□ 0.42
VDAC1-206ENST00000489906 TMF1P82094 1093 aa17.65■□□□□ 0.42
VDAC1-206ENST00000489906 PALLDQ8WX93 1383 aa17.65■□□□□ 0.42
VDAC1-206ENST00000489906 C5P01031 1676 aa17.64■□□□□ 0.41
VDAC1-206ENST00000489906 PPM1GO15355 546 aaPredicted RBP17.63■□□□□ 0.41
VDAC1-206ENST00000489906 CYP27B1O15528 508 aa17.63■□□□□ 0.41
VDAC1-206ENST00000489906 EMILIN1Q9Y6C2 1016 aa17.63■□□□□ 0.41
VDAC1-206ENST00000489906 CGNL1Q0VF96 1302 aa17.63■□□□□ 0.41
VDAC1-206ENST00000489906 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
VDAC1-206ENST00000489906 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
VDAC1-206ENST00000489906 PHF14O94880 888 aa17.62■□□□□ 0.41
VDAC1-206ENST00000489906 AMIGO3Q86WK7 504 aa17.62■□□□□ 0.41
VDAC1-206ENST00000489906 KIF20BQ96Q89 1820 aa17.62■□□□□ 0.41
VDAC1-206ENST00000489906 INSRP06213 1382 aa17.62■□□□□ 0.41
VDAC1-206ENST00000489906 CEP350Q5VT06 3117 aa17.61■□□□□ 0.41
VDAC1-206ENST00000489906 FLT4P35916 1363 aa17.61■□□□□ 0.41
VDAC1-206ENST00000489906 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
VDAC1-206ENST00000489906 GRIN3BO60391 1043 aa17.6■□□□□ 0.41
VDAC1-206ENST00000489906 AK7Q96M32 723 aa17.6■□□□□ 0.41
VDAC1-206ENST00000489906 CARD14Q9BXL6 1004 aa17.6■□□□□ 0.41
VDAC1-206ENST00000489906 SLC24A1O60721 1099 aa17.59■□□□□ 0.41
VDAC1-206ENST00000489906 ZNF526Q8TF50 670 aaPredicted RBP17.59■□□□□ 0.41
VDAC1-206ENST00000489906 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.41
VDAC1-206ENST00000489906 NSD3Q9BZ95 1437 aa17.58■□□□□ 0.41
VDAC1-206ENST00000489906 PIGBQ92521 554 aa17.58■□□□□ 0.4
VDAC1-206ENST00000489906 ITGB4P16144 1822 aa17.58■□□□□ 0.4
VDAC1-206ENST00000489906 ATP10DQ9P241 1426 aa17.57■□□□□ 0.4
VDAC1-206ENST00000489906 C4BP0C0L5 1744 aa17.57■□□□□ 0.4
VDAC1-206ENST00000489906 FLAD1Q8NFF5 587 aa17.56■□□□□ 0.4
VDAC1-206ENST00000489906 CD2APQ9Y5K6 639 aa17.56■□□□□ 0.4
VDAC1-206ENST00000489906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.55■□□□□ 0.4
VDAC1-206ENST00000489906 LINC00116Q8NCU8 138 aa17.55■□□□□ 0.4
VDAC1-206ENST00000489906 SMARCC1Q92922 1105 aaPredicted RBP17.55■□□□□ 0.4
VDAC1-206ENST00000489906 POLR3GLQ9BT43 218 aa17.55■□□□□ 0.4
VDAC1-206ENST00000489906 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
VDAC1-206ENST00000489906 PKD1L3Q7Z443 1732 aa17.53■□□□□ 0.4
VDAC1-206ENST00000489906 TNNT2P45379 298 aaPredicted RBP17.53■□□□□ 0.4
VDAC1-206ENST00000489906 CDCA8Q53HL2 280 aa17.53■□□□□ 0.4
VDAC1-206ENST00000489906 LOC102724428A0A0B4J2F2 783 aa17.52■□□□□ 0.4
VDAC1-206ENST00000489906 SIK1P57059 783 aa17.52■□□□□ 0.4
VDAC1-206ENST00000489906 EYA1Q99502 592 aa17.52■□□□□ 0.4
VDAC1-206ENST00000489906 ASAP1Q9ULH1 1129 aa17.52■□□□□ 0.4
VDAC1-206ENST00000489906 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
VDAC1-206ENST00000489906 UBR3Q6ZT12 1888 aa17.52■□□□□ 0.39
VDAC1-206ENST00000489906 KIF24Q5T7B8 1368 aa17.52■□□□□ 0.39
VDAC1-206ENST00000489906 GNPATO15228 680 aa17.51■□□□□ 0.39
VDAC1-206ENST00000489906 ITPK1Q13572 414 aa17.51■□□□□ 0.39
VDAC1-206ENST00000489906 GPBP1L1Q9HC44 474 aaPredicted RBP17.51■□□□□ 0.39
VDAC1-206ENST00000489906 TMOD3Q9NYL9 352 aa17.51■□□□□ 0.39
VDAC1-206ENST00000489906 ATP6V1AP38606 617 aa17.49■□□□□ 0.39
VDAC1-206ENST00000489906 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
VDAC1-206ENST00000489906 MAP2P11137 1827 aaKnown RBP17.49■□□□□ 0.39
VDAC1-206ENST00000489906 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
VDAC1-206ENST00000489906 NCAPD2Q15021 1401 aa17.47■□□□□ 0.39
VDAC1-206ENST00000489906 PHKG2P15735 406 aa17.47■□□□□ 0.39
VDAC1-206ENST00000489906 SSFA2P28290 1259 aa17.47■□□□□ 0.39
VDAC1-206ENST00000489906 ATG3Q9NT62 314 aa17.47■□□□□ 0.39
VDAC1-206ENST00000489906 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
VDAC1-206ENST00000489906 ADCY9O60503 1353 aa17.46■□□□□ 0.39
VDAC1-206ENST00000489906 MMP10P09238 476 aa17.46■□□□□ 0.39
VDAC1-206ENST00000489906 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
VDAC1-206ENST00000489906 IFNL2Q8IZJ0 200 aa17.46■□□□□ 0.39
VDAC1-206ENST00000489906 ANKRD26Q9UPS8 1709 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms