RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 EYA1Q99502 592 aa24.34■■□□□ 1.49
ABCF3-217ENST00000489719 MEGF6O75095 1541 aa24.33■■□□□ 1.49
ABCF3-217ENST00000489719 EIF4A2Q14240 407 aaKnown RBP24.31■■□□□ 1.48
ABCF3-217ENST00000489719 AMER1Q5JTC6 1135 aaPredicted RBP24.31■■□□□ 1.48
ABCF3-217ENST00000489719 STK32BQ9NY57 414 aa24.3■■□□□ 1.48
ABCF3-217ENST00000489719 SPG7Q9UQ90 795 aa24.3■■□□□ 1.48
ABCF3-217ENST00000489719 PCDH11XQ9BZA7 1347 aa24.3■■□□□ 1.48
ABCF3-217ENST00000489719 PCDH11YQ9BZA8 1340 aa24.3■■□□□ 1.48
ABCF3-217ENST00000489719 SBF2Q86WG5 1849 aa24.29■■□□□ 1.48
ABCF3-217ENST00000489719 SRCAPQ6ZRS2 3230 aa24.29■■□□□ 1.48
ABCF3-217ENST00000489719 PER1O15534 1290 aaPredicted RBP24.28■■□□□ 1.48
ABCF3-217ENST00000489719 ANO8Q9HCE9 1232 aaPredicted RBP24.26■■□□□ 1.47
ABCF3-217ENST00000489719 CYP27B1O15528 508 aa24.25■■□□□ 1.47
ABCF3-217ENST00000489719 SLC15A2Q16348 729 aa24.25■■□□□ 1.47
ABCF3-217ENST00000489719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.25■■□□□ 1.47
ABCF3-217ENST00000489719 RGPD2P0DJD1 1756 aa24.24■■□□□ 1.47
ABCF3-217ENST00000489719 CC2D1BQ5T0F9 858 aaKnown RBP24.24■■□□□ 1.47
ABCF3-217ENST00000489719 RREB1Q92766 1687 aa24.24■■□□□ 1.47
ABCF3-217ENST00000489719 SLC27A3Q5K4L6 730 aa24.23■■□□□ 1.47
ABCF3-217ENST00000489719 SPON1Q9HCB6 807 aa24.22■■□□□ 1.47
ABCF3-217ENST00000489719 MAP2P11137 1827 aaKnown RBP24.21■■□□□ 1.47
ABCF3-217ENST00000489719 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
ABCF3-217ENST00000489719 NUP188Q5SRE5 1749 aa24.21■■□□□ 1.47
ABCF3-217ENST00000489719 NHSQ6T4R5 1651 aa24.21■■□□□ 1.47
ABCF3-217ENST00000489719 MTHFSP49914 203 aa24.2■■□□□ 1.46
ABCF3-217ENST00000489719 MPRIPQ6WCQ1 1025 aa24.2■■□□□ 1.46
ABCF3-217ENST00000489719 IFNL2Q8IZJ0 200 aa24.2■■□□□ 1.46
ABCF3-217ENST00000489719 LRRC4BQ9NT99 713 aa24.2■■□□□ 1.46
ABCF3-217ENST00000489719 NCAPD2Q15021 1401 aa24.19■■□□□ 1.46
ABCF3-217ENST00000489719 IGSF1Q8N6C5 1336 aa24.19■■□□□ 1.46
ABCF3-217ENST00000489719 KAT6BQ8WYB5 2073 aa24.19■■□□□ 1.46
ABCF3-217ENST00000489719 NKX1-1Q15270 411 aaPredicted RBP24.19■■□□□ 1.46
ABCF3-217ENST00000489719 RGPD3A6NKT7 1758 aaPredicted RBP24.19■■□□□ 1.46
ABCF3-217ENST00000489719 RGPD4Q7Z3J3 1758 aa24.19■■□□□ 1.46
ABCF3-217ENST00000489719 PLEKHO1Q53GL0 409 aaPredicted RBP24.18■■□□□ 1.46
ABCF3-217ENST00000489719 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
ABCF3-217ENST00000489719 IL13P35225 146 aa24.16■■□□□ 1.46
ABCF3-217ENST00000489719 PPP1R1BQ9UD71 204 aaPredicted RBP24.16■■□□□ 1.46
ABCF3-217ENST00000489719 CCNL1Q9UK58 526 aaPredicted RBP24.16■■□□□ 1.46
ABCF3-217ENST00000489719 PHKG2P15735 406 aa24.15■■□□□ 1.46
ABCF3-217ENST00000489719 HMGB2P26583 209 aaKnown RBP24.15■■□□□ 1.46
ABCF3-217ENST00000489719 KCNQ4P56696 695 aa24.15■■□□□ 1.46
ABCF3-217ENST00000489719 AMOTQ4VCS5 1084 aa24.15■■□□□ 1.46
ABCF3-217ENST00000489719 SULT6B1Q6IMI4 303 aa24.15■■□□□ 1.46
ABCF3-217ENST00000489719 PDGFDQ9GZP0 370 aaPredicted RBP24.15■■□□□ 1.46
ABCF3-217ENST00000489719 ZBTB7AO95365 584 aa24.14■■□□□ 1.45
ABCF3-217ENST00000489719 SMARCC1Q92922 1105 aaPredicted RBP24.14■■□□□ 1.45
ABCF3-217ENST00000489719 NPC1L1Q9UHC9 1359 aa24.13■■□□□ 1.45
ABCF3-217ENST00000489719 LRP5O75197 1615 aa24.13■■□□□ 1.45
ABCF3-217ENST00000489719 HSP90AB1P08238 724 aaKnown RBP24.12■■□□□ 1.45
ABCF3-217ENST00000489719 ZNF827Q17R98 1081 aa24.12■■□□□ 1.45
ABCF3-217ENST00000489719 PIGBQ92521 554 aa24.12■■□□□ 1.45
ABCF3-217ENST00000489719 TFCP2L1Q9NZI6 479 aa24.12■■□□□ 1.45
ABCF3-217ENST00000489719 ATF5Q9Y2D1 282 aaPredicted RBP24.12■■□□□ 1.45
ABCF3-217ENST00000489719 BTAF1O14981 1849 aa24.12■■□□□ 1.45
ABCF3-217ENST00000489719 AEBP1Q8IUX7 1158 aa24.11■■□□□ 1.45
ABCF3-217ENST00000489719 AKT1S1Q96B36 256 aa24.11■■□□□ 1.45
ABCF3-217ENST00000489719 TMOD3Q9NYL9 352 aa24.11■■□□□ 1.45
ABCF3-217ENST00000489719 DIAPH1O60610 1272 aaKnown RBP24.1■■□□□ 1.45
ABCF3-217ENST00000489719 ZNF530Q6P9A1 599 aaPredicted RBP24.1■■□□□ 1.45
ABCF3-217ENST00000489719 PLEKHG2Q9H7P9 1386 aa24.1■■□□□ 1.45
ABCF3-217ENST00000489719 SHANK3Q9BYB0 1731 aa24.08■■□□□ 1.45
ABCF3-217ENST00000489719 C1orf141Q5JVX7 400 aa24.08■■□□□ 1.45
ABCF3-217ENST00000489719 MTFR1LQ9H019 292 aa24.08■■□□□ 1.45
ABCF3-217ENST00000489719 DCAF5Q96JK2 942 aa24.07■■□□□ 1.44
ABCF3-217ENST00000489719 PALLDQ8WX93 1383 aa24.06■■□□□ 1.44
ABCF3-217ENST00000489719 ERVV-2B6SEH9 535 aa24.06■■□□□ 1.44
ABCF3-217ENST00000489719 DOT1LQ8TEK3 1739 aa24.05■■□□□ 1.44
ABCF3-217ENST00000489719 HMOX1P09601 288 aa24.04■■□□□ 1.44
ABCF3-217ENST00000489719 SLC16A10Q8TF71 515 aa24.04■■□□□ 1.44
ABCF3-217ENST00000489719 ASAP1Q9ULH1 1129 aa24.03■■□□□ 1.44
ABCF3-217ENST00000489719 MSH5O43196 834 aa24.02■■□□□ 1.44
ABCF3-217ENST00000489719 PTGER2P43116 358 aa24.02■■□□□ 1.44
ABCF3-217ENST00000489719 CABP4P57796 275 aa24.02■■□□□ 1.44
ABCF3-217ENST00000489719 CFAP53Q96M91 514 aa24.02■■□□□ 1.44
ABCF3-217ENST00000489719 KDRP35968 1356 aa24.02■■□□□ 1.44
ABCF3-217ENST00000489719 PKD1L3Q7Z443 1732 aa24.01■■□□□ 1.43
ABCF3-217ENST00000489719 U2SURPO15042 1029 aaKnown RBP24.01■■□□□ 1.43
ABCF3-217ENST00000489719 LOC102724428A0A0B4J2F2 783 aa24■■□□□ 1.43
ABCF3-217ENST00000489719 SIK1P57059 783 aa24■■□□□ 1.43
ABCF3-217ENST00000489719 ATG3Q9NT62 314 aa24■■□□□ 1.43
ABCF3-217ENST00000489719 PNPLA7Q6ZV29 1317 aa24■■□□□ 1.43
ABCF3-217ENST00000489719 AKAP4Q5JQC9 854 aa23.98■■□□□ 1.43
ABCF3-217ENST00000489719 FLAD1Q8NFF5 587 aa23.98■■□□□ 1.43
ABCF3-217ENST00000489719 DCAF8L1A6NGE4 600 aa23.97■■□□□ 1.43
ABCF3-217ENST00000489719 ATP6V1AP38606 617 aa23.97■■□□□ 1.43
ABCF3-217ENST00000489719 AK7Q96M32 723 aa23.97■■□□□ 1.43
ABCF3-217ENST00000489719 PAPPAQ13219 1627 aa23.96■■□□□ 1.43
ABCF3-217ENST00000489719 POLD1P28340 1107 aa23.96■■□□□ 1.43
ABCF3-217ENST00000489719 ARXQ96QS3 562 aa23.96■■□□□ 1.43
ABCF3-217ENST00000489719 PPP2R1AP30153 589 aa23.95■■□□□ 1.42
ABCF3-217ENST00000489719 COL23A1Q86Y22 540 aaPredicted RBP23.95■■□□□ 1.42
ABCF3-217ENST00000489719 NFATC2IPQ8NCF5 419 aa23.95■■□□□ 1.42
ABCF3-217ENST00000489719 SGIP1Q9BQI5 828 aa23.95■■□□□ 1.42
ABCF3-217ENST00000489719 RBM42Q9BTD8 480 aaKnown RBP23.95■■□□□ 1.42
ABCF3-217ENST00000489719 NUDCQ9Y266 331 aa23.95■■□□□ 1.42
ABCF3-217ENST00000489719 CASZ1Q86V15 1759 aa23.94■■□□□ 1.42
ABCF3-217ENST00000489719 MTHFSDQ2M296 383 aaKnown RBP23.93■■□□□ 1.42
ABCF3-217ENST00000489719 LY75O60449 1722 aa23.93■■□□□ 1.42
ABCF3-217ENST00000489719 LINC00116Q8NCU8 138 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms