RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ACSBG1Q96GR2 724 aa14.41□□□□□ -0.1
SCAMP4-208ENST00000489554 LRP5O75197 1615 aa14.41□□□□□ -0.1
SCAMP4-208ENST00000489554 TATP17735 454 aaPredicted RBP14.4□□□□□ -0.1
SCAMP4-208ENST00000489554 USHBP1Q8N6Y0 703 aa14.4□□□□□ -0.1
SCAMP4-208ENST00000489554 POLKQ9UBT6 870 aa14.4□□□□□ -0.1
SCAMP4-208ENST00000489554 ANKRD26Q9UPS8 1709 aa14.4□□□□□ -0.1
SCAMP4-208ENST00000489554 TXNRD1Q16881 649 aa14.39□□□□□ -0.11
SCAMP4-208ENST00000489554 KNSTRNQ9Y448 316 aa14.39□□□□□ -0.11
SCAMP4-208ENST00000489554 RGPD2P0DJD1 1756 aa14.39□□□□□ -0.11
SCAMP4-208ENST00000489554 SRCAPQ6ZRS2 3230 aa14.38□□□□□ -0.11
SCAMP4-208ENST00000489554 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-208ENST00000489554 PROM2Q8N271 834 aa14.38□□□□□ -0.11
SCAMP4-208ENST00000489554 NCAPD2Q15021 1401 aa14.37□□□□□ -0.11
SCAMP4-208ENST00000489554 PCDH11XQ9BZA7 1347 aa14.37□□□□□ -0.11
SCAMP4-208ENST00000489554 PCDH11YQ9BZA8 1340 aa14.37□□□□□ -0.11
SCAMP4-208ENST00000489554 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
SCAMP4-208ENST00000489554 DIEXFQ68CQ4 756 aaKnown RBP14.35□□□□□ -0.11
SCAMP4-208ENST00000489554 ANO8Q9HCE9 1232 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-208ENST00000489554 MAP2P11137 1827 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-208ENST00000489554 PRIM1P49642 420 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-208ENST00000489554 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-208ENST00000489554 SYTL4Q96C24 671 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-208ENST00000489554 EYA1Q99502 592 aa14.34□□□□□ -0.11
SCAMP4-208ENST00000489554 STK32BQ9NY57 414 aa14.34□□□□□ -0.11
SCAMP4-208ENST00000489554 SHANK3Q9BYB0 1731 aa14.34□□□□□ -0.11
SCAMP4-208ENST00000489554 BTAF1O14981 1849 aa14.34□□□□□ -0.11
SCAMP4-208ENST00000489554 EIF4A2Q14240 407 aaKnown RBP14.33□□□□□ -0.12
SCAMP4-208ENST00000489554 PLEKHG2Q9H7P9 1386 aa14.33□□□□□ -0.12
SCAMP4-208ENST00000489554 NPC1L1Q9UHC9 1359 aa14.33□□□□□ -0.12
SCAMP4-208ENST00000489554 SLC15A2Q16348 729 aa14.32□□□□□ -0.12
SCAMP4-208ENST00000489554 SLC27A3Q5K4L6 730 aa14.32□□□□□ -0.12
SCAMP4-208ENST00000489554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.32□□□□□ -0.12
SCAMP4-208ENST00000489554 SPG7Q9UQ90 795 aa14.32□□□□□ -0.12
SCAMP4-208ENST00000489554 CYP27B1O15528 508 aa14.31□□□□□ -0.12
SCAMP4-208ENST00000489554 SPON1Q9HCB6 807 aa14.31□□□□□ -0.12
SCAMP4-208ENST00000489554 DOT1LQ8TEK3 1739 aa14.31□□□□□ -0.12
SCAMP4-208ENST00000489554 PKD1L3Q7Z443 1732 aa14.3□□□□□ -0.12
SCAMP4-208ENST00000489554 IGSF1Q8N6C5 1336 aa14.3□□□□□ -0.12
SCAMP4-208ENST00000489554 PAPPAQ13219 1627 aa14.29□□□□□ -0.12
SCAMP4-208ENST00000489554 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
SCAMP4-208ENST00000489554 NKX1-1Q15270 411 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-208ENST00000489554 LRRC4BQ9NT99 713 aa14.28□□□□□ -0.12
SCAMP4-208ENST00000489554 HMGB2P26583 209 aaKnown RBP14.27□□□□□ -0.13
SCAMP4-208ENST00000489554 CASZ1Q86V15 1759 aa14.27□□□□□ -0.13
SCAMP4-208ENST00000489554 IFNL2Q8IZJ0 200 aa14.26□□□□□ -0.13
SCAMP4-208ENST00000489554 PRKRIP1Q9H875 184 aaPredicted RBP14.26□□□□□ -0.13
SCAMP4-208ENST00000489554 PHKG2P15735 406 aa14.25□□□□□ -0.13
SCAMP4-208ENST00000489554 ZNF827Q17R98 1081 aa14.25□□□□□ -0.13
SCAMP4-208ENST00000489554 CC2D1BQ5T0F9 858 aaKnown RBP14.25□□□□□ -0.13
SCAMP4-208ENST00000489554 MPRIPQ6WCQ1 1025 aa14.25□□□□□ -0.13
SCAMP4-208ENST00000489554 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
SCAMP4-208ENST00000489554 PDGFDQ9GZP0 370 aaPredicted RBP14.25□□□□□ -0.13
SCAMP4-208ENST00000489554 PPP1R1BQ9UD71 204 aaPredicted RBP14.25□□□□□ -0.13
SCAMP4-208ENST00000489554 CCNL1Q9UK58 526 aaPredicted RBP14.25□□□□□ -0.13
SCAMP4-208ENST00000489554 ZBTB7AO95365 584 aa14.24□□□□□ -0.13
SCAMP4-208ENST00000489554 IL13P35225 146 aa14.24□□□□□ -0.13
SCAMP4-208ENST00000489554 MTHFSP49914 203 aa14.24□□□□□ -0.13
SCAMP4-208ENST00000489554 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
SCAMP4-208ENST00000489554 PLEKHO1Q53GL0 409 aaPredicted RBP14.24□□□□□ -0.13
SCAMP4-208ENST00000489554 SMARCC1Q92922 1105 aaPredicted RBP14.24□□□□□ -0.13
SCAMP4-208ENST00000489554 MTFR1LQ9H019 292 aa14.24□□□□□ -0.13
SCAMP4-208ENST00000489554 LY75O60449 1722 aa14.24□□□□□ -0.13
SCAMP4-208ENST00000489554 PALLDQ8WX93 1383 aa14.23□□□□□ -0.13
SCAMP4-208ENST00000489554 HSP90AB1P08238 724 aaKnown RBP14.23□□□□□ -0.13
SCAMP4-208ENST00000489554 MIER1Q8N108 512 aa14.23□□□□□ -0.13
SCAMP4-208ENST00000489554 KDRP35968 1356 aa14.22□□□□□ -0.13
SCAMP4-208ENST00000489554 TOGARAM1Q9Y4F4 1720 aa14.22□□□□□ -0.13
SCAMP4-208ENST00000489554 KCNQ4P56696 695 aa14.22□□□□□ -0.13
SCAMP4-208ENST00000489554 PIGBQ92521 554 aa14.22□□□□□ -0.13
SCAMP4-208ENST00000489554 TMOD3Q9NYL9 352 aa14.22□□□□□ -0.13
SCAMP4-208ENST00000489554 TFCP2L1Q9NZI6 479 aa14.22□□□□□ -0.13
SCAMP4-208ENST00000489554 SULT6B1Q6IMI4 303 aa14.21□□□□□ -0.13
SCAMP4-208ENST00000489554 AEBP1Q8IUX7 1158 aa14.21□□□□□ -0.13
SCAMP4-208ENST00000489554 SLC16A10Q8TF71 515 aa14.21□□□□□ -0.13
SCAMP4-208ENST00000489554 ATF5Q9Y2D1 282 aaPredicted RBP14.21□□□□□ -0.13
SCAMP4-208ENST00000489554 ANP32CO43423 234 aa14.2□□□□□ -0.14
SCAMP4-208ENST00000489554 PTGER2P43116 358 aa14.2□□□□□ -0.14
SCAMP4-208ENST00000489554 ZNF530Q6P9A1 599 aaPredicted RBP14.2□□□□□ -0.14
SCAMP4-208ENST00000489554 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
SCAMP4-208ENST00000489554 PNPLA7Q6ZV29 1317 aa14.19□□□□□ -0.14
SCAMP4-208ENST00000489554 ERVV-2B6SEH9 535 aa14.19□□□□□ -0.14
SCAMP4-208ENST00000489554 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
SCAMP4-208ENST00000489554 CNGB1Q14028 1251 aaPredicted RBP14.19□□□□□ -0.14
SCAMP4-208ENST00000489554 RALBP1Q15311 655 aa14.19□□□□□ -0.14
SCAMP4-208ENST00000489554 C1orf141Q5JVX7 400 aa14.19□□□□□ -0.14
SCAMP4-208ENST00000489554 QSER1Q2KHR3 1735 aa14.18□□□□□ -0.14
SCAMP4-208ENST00000489554 ITGB4P16144 1822 aa14.18□□□□□ -0.14
SCAMP4-208ENST00000489554 CCDC184Q52MB2 194 aa14.17□□□□□ -0.14
SCAMP4-208ENST00000489554 SGIP1Q9BQI5 828 aa14.17□□□□□ -0.14
SCAMP4-208ENST00000489554 LOC102724428A0A0B4J2F2 783 aa14.16□□□□□ -0.14
SCAMP4-208ENST00000489554 PPP2R1AP30153 589 aa14.16□□□□□ -0.14
SCAMP4-208ENST00000489554 SIK1P57059 783 aa14.16□□□□□ -0.14
SCAMP4-208ENST00000489554 FLAD1Q8NFF5 587 aa14.16□□□□□ -0.14
SCAMP4-208ENST00000489554 ASAP1Q9ULH1 1129 aa14.16□□□□□ -0.14
SCAMP4-208ENST00000489554 C5P01031 1676 aa14.16□□□□□ -0.14
SCAMP4-208ENST00000489554 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.14
SCAMP4-208ENST00000489554 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
SCAMP4-208ENST00000489554 CABP4P57796 275 aa14.15□□□□□ -0.14
SCAMP4-208ENST00000489554 ATG3Q9NT62 314 aa14.15□□□□□ -0.14
SCAMP4-208ENST00000489554 COL3A1P02461 1466 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms