RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
HDAC6-233ENST00000489352 HMGB2P26583 209 aaKnown RBP16.94■□□□□ 0.3
HDAC6-233ENST00000489352 DCAF11Q8TEB1 546 aa16.94■□□□□ 0.3
HDAC6-233ENST00000489352 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
HDAC6-233ENST00000489352 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
HDAC6-233ENST00000489352 QRICH2Q9H0J4 1663 aa16.91■□□□□ 0.3
HDAC6-233ENST00000489352 CABP1Q9NZU7 370 aa16.9■□□□□ 0.3
HDAC6-233ENST00000489352 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
HDAC6-233ENST00000489352 CABP2Q9NPB3 220 aa16.89■□□□□ 0.29
HDAC6-233ENST00000489352 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-233ENST00000489352 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
HDAC6-233ENST00000489352 USP47Q96K76 1375 aa16.88■□□□□ 0.29
HDAC6-233ENST00000489352 DOT1LQ8TEK3 1739 aa16.87■□□□□ 0.29
HDAC6-233ENST00000489352 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
HDAC6-233ENST00000489352 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
HDAC6-233ENST00000489352 C5P01031 1676 aa16.87■□□□□ 0.29
HDAC6-233ENST00000489352 ANKRD36BQ8N2N9 1353 aa16.87■□□□□ 0.29
HDAC6-233ENST00000489352 FAM161AQ3B820 660 aa16.86■□□□□ 0.29
HDAC6-233ENST00000489352 ERBB3P21860 1342 aa16.86■□□□□ 0.29
HDAC6-233ENST00000489352 RRAGCQ9HB90 399 aa16.85■□□□□ 0.29
HDAC6-233ENST00000489352 PLEKHG2Q9H7P9 1386 aa16.84■□□□□ 0.29
HDAC6-233ENST00000489352 N4BP2Q86UW6 1770 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-233ENST00000489352 TNRC6CQ9HCJ0 1690 aaKnown RBP16.82■□□□□ 0.28
HDAC6-233ENST00000489352 C9orf131Q5VYM1 1079 aa16.82■□□□□ 0.28
HDAC6-233ENST00000489352 ANKRD24Q8TF21 1146 aa16.82■□□□□ 0.28
HDAC6-233ENST00000489352 AK7Q96M32 723 aa16.82■□□□□ 0.28
HDAC6-233ENST00000489352 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-233ENST00000489352 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
HDAC6-233ENST00000489352 LTN1O94822 1766 aa16.82■□□□□ 0.28
HDAC6-233ENST00000489352 TTC21BQ7Z4L5 1316 aa16.81■□□□□ 0.28
HDAC6-233ENST00000489352 PHF14O94880 888 aa16.81■□□□□ 0.28
HDAC6-233ENST00000489352 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
HDAC6-233ENST00000489352 NFAT5O94916 1531 aa16.8■□□□□ 0.28
HDAC6-233ENST00000489352 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
HDAC6-233ENST00000489352 FCHSD2O94868 740 aa16.8■□□□□ 0.28
HDAC6-233ENST00000489352 KCPQ6ZWJ8 1503 aa16.8■□□□□ 0.28
HDAC6-233ENST00000489352 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
HDAC6-233ENST00000489352 TGFB2P61812 414 aa16.79■□□□□ 0.28
HDAC6-233ENST00000489352 NSD2O96028 1365 aa16.77■□□□□ 0.28
HDAC6-233ENST00000489352 A0A0G2JLW4 131 aa16.77■□□□□ 0.28
HDAC6-233ENST00000489352 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
HDAC6-233ENST00000489352 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
HDAC6-233ENST00000489352 NSD3Q9BZ95 1437 aa16.77■□□□□ 0.27
HDAC6-233ENST00000489352 CENPJQ9HC77 1338 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-233ENST00000489352 MLLT1Q03111 559 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-233ENST00000489352 AIDAQ96BJ3 306 aa16.76■□□□□ 0.27
HDAC6-233ENST00000489352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.75■□□□□ 0.27
HDAC6-233ENST00000489352 ZCRB1Q8TBF4 217 aaKnown RBP16.75■□□□□ 0.27
HDAC6-233ENST00000489352 RNF181Q9P0P0 153 aa16.75■□□□□ 0.27
HDAC6-233ENST00000489352 C4BP0C0L5 1744 aa16.75■□□□□ 0.27
HDAC6-233ENST00000489352 KIF13BQ9NQT8 1826 aa16.75■□□□□ 0.27
HDAC6-233ENST00000489352 UBR3Q6ZT12 1888 aa16.74■□□□□ 0.27
HDAC6-233ENST00000489352 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
HDAC6-233ENST00000489352 KIAA1210Q9ULL0 1709 aa16.73■□□□□ 0.27
HDAC6-233ENST00000489352 FAM208AQ9UK61 1670 aaKnown RBP16.73■□□□□ 0.27
HDAC6-233ENST00000489352 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-233ENST00000489352 ARFGEF1Q9Y6D6 1849 aa16.73■□□□□ 0.27
HDAC6-233ENST00000489352 FOXN1O15353 648 aa16.72■□□□□ 0.27
HDAC6-233ENST00000489352 MMP10P09238 476 aa16.72■□□□□ 0.27
HDAC6-233ENST00000489352 VEGFAP15692 232 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-233ENST00000489352 SSFA2P28290 1259 aa16.71■□□□□ 0.27
HDAC6-233ENST00000489352 CTCFP49711 727 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-233ENST00000489352 SMIM5Q71RC9 77 aa16.71■□□□□ 0.27
HDAC6-233ENST00000489352 KTN1Q86UP2 1357 aaKnown RBP16.71■□□□□ 0.27
HDAC6-233ENST00000489352 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
HDAC6-233ENST00000489352 PALLDQ8WX93 1383 aa16.7■□□□□ 0.26
HDAC6-233ENST00000489352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
HDAC6-233ENST00000489352 ABHD8Q96I13 439 aa16.7■□□□□ 0.26
HDAC6-233ENST00000489352 MKRN1Q9UHC7 482 aaKnown RBP16.7■□□□□ 0.26
HDAC6-233ENST00000489352 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
HDAC6-233ENST00000489352 SBF1O95248 1867 aa16.69■□□□□ 0.26
HDAC6-233ENST00000489352 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
HDAC6-233ENST00000489352 DPEP1P16444 411 aa16.68■□□□□ 0.26
HDAC6-233ENST00000489352 MPRIPQ6WCQ1 1025 aa16.68■□□□□ 0.26
HDAC6-233ENST00000489352 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-233ENST00000489352 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
HDAC6-233ENST00000489352 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
HDAC6-233ENST00000489352 CCDC85CA6NKD9 419 aa16.67■□□□□ 0.26
HDAC6-233ENST00000489352 PIM2Q9P1W9 311 aa16.67■□□□□ 0.26
HDAC6-233ENST00000489352 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
HDAC6-233ENST00000489352 DALRD3Q5D0E6 543 aaKnown RBP16.65■□□□□ 0.26
HDAC6-233ENST00000489352 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
HDAC6-233ENST00000489352 LBX1P52954 281 aa16.64■□□□□ 0.25
HDAC6-233ENST00000489352 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
HDAC6-233ENST00000489352 NLGN1Q8N2Q7 840 aa16.64■□□□□ 0.25
HDAC6-233ENST00000489352 GNPATO15228 680 aa16.63■□□□□ 0.25
HDAC6-233ENST00000489352 IP6K1Q92551 441 aa16.63■□□□□ 0.25
HDAC6-233ENST00000489352 RGPD2P0DJD1 1756 aa16.63■□□□□ 0.25
HDAC6-233ENST00000489352 ITGB4P16144 1822 aa16.62■□□□□ 0.25
HDAC6-233ENST00000489352 GLTPD2A6NH11 291 aa16.62■□□□□ 0.25
HDAC6-233ENST00000489352 TMF1P82094 1093 aa16.62■□□□□ 0.25
HDAC6-233ENST00000489352 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
HDAC6-233ENST00000489352 ZC3H4Q9UPT8 1303 aaKnown RBP16.62■□□□□ 0.25
HDAC6-233ENST00000489352 USP31Q70CQ4 1352 aa16.62■□□□□ 0.25
HDAC6-233ENST00000489352 MON2Q7Z3U7 1717 aa16.62■□□□□ 0.25
HDAC6-233ENST00000489352 NME9Q86XW9 330 aa16.61■□□□□ 0.25
HDAC6-233ENST00000489352 DCAF5Q96JK2 942 aa16.61■□□□□ 0.25
HDAC6-233ENST00000489352 RAPGEF4Q8WZA2 1011 aa16.6■□□□□ 0.25
HDAC6-233ENST00000489352 CFAP44Q96MT7 982 aa16.6■□□□□ 0.25
HDAC6-233ENST00000489352 CGNL1Q0VF96 1302 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms