RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 PCDH11YQ9BZA8 1340 aa20.41■□□□□ 0.86
CYTH3-209ENST00000488964 SPG7Q9UQ90 795 aa20.4■□□□□ 0.86
CYTH3-209ENST00000488964 PLEKHG2Q9H7P9 1386 aa20.39■□□□□ 0.85
CYTH3-209ENST00000488964 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.85
CYTH3-209ENST00000488964 EYA1Q99502 592 aa20.39■□□□□ 0.85
CYTH3-209ENST00000488964 NCAPD2Q15021 1401 aa20.38■□□□□ 0.85
CYTH3-209ENST00000488964 RGPD3A6NKT7 1758 aaPredicted RBP20.38■□□□□ 0.85
CYTH3-209ENST00000488964 RGPD4Q7Z3J3 1758 aa20.38■□□□□ 0.85
CYTH3-209ENST00000488964 PLSCR1O15162 318 aa20.37■□□□□ 0.85
CYTH3-209ENST00000488964 EZH2Q15910 746 aaKnown RBP20.37■□□□□ 0.85
CYTH3-209ENST00000488964 ACSBG1Q96GR2 724 aa20.37■□□□□ 0.85
CYTH3-209ENST00000488964 CAMKK2Q96RR4 588 aa20.37■□□□□ 0.85
CYTH3-209ENST00000488964 NHSQ6T4R5 1651 aa20.37■□□□□ 0.85
CYTH3-209ENST00000488964 IGSF1Q8N6C5 1336 aa20.36■□□□□ 0.85
CYTH3-209ENST00000488964 MTHFSP49914 203 aa20.36■□□□□ 0.85
CYTH3-209ENST00000488964 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
CYTH3-209ENST00000488964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.36■□□□□ 0.85
CYTH3-209ENST00000488964 SYTL4Q96C24 671 aaPredicted RBP20.34■□□□□ 0.85
CYTH3-209ENST00000488964 CFAP53Q96M91 514 aa20.34■□□□□ 0.85
CYTH3-209ENST00000488964 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.84
CYTH3-209ENST00000488964 SHANK3Q9BYB0 1731 aa20.33■□□□□ 0.84
CYTH3-209ENST00000488964 DIAPH1O60610 1272 aaKnown RBP20.31■□□□□ 0.84
CYTH3-209ENST00000488964 PLEKHO1Q53GL0 409 aaPredicted RBP20.31■□□□□ 0.84
CYTH3-209ENST00000488964 RREB1Q92766 1687 aa20.31■□□□□ 0.84
CYTH3-209ENST00000488964 DOT1LQ8TEK3 1739 aa20.3■□□□□ 0.84
CYTH3-209ENST00000488964 KCNQ2O43526 872 aa20.3■□□□□ 0.84
CYTH3-209ENST00000488964 AMOTQ4VCS5 1084 aa20.3■□□□□ 0.84
CYTH3-209ENST00000488964 HSP90AB1P08238 724 aaKnown RBP20.29■□□□□ 0.84
CYTH3-209ENST00000488964 HMGB2P26583 209 aaKnown RBP20.29■□□□□ 0.84
CYTH3-209ENST00000488964 IL13P35225 146 aa20.29■□□□□ 0.84
CYTH3-209ENST00000488964 SULT6B1Q6IMI4 303 aa20.29■□□□□ 0.84
CYTH3-209ENST00000488964 IFNL2Q8IZJ0 200 aa20.29■□□□□ 0.84
CYTH3-209ENST00000488964 BTAF1O14981 1849 aa20.29■□□□□ 0.84
CYTH3-209ENST00000488964 PRIM1P49642 420 aaKnown RBP20.28■□□□□ 0.84
CYTH3-209ENST00000488964 NUP188Q5SRE5 1749 aa20.27■□□□□ 0.84
CYTH3-209ENST00000488964 CYP27B1O15528 508 aa20.26■□□□□ 0.83
CYTH3-209ENST00000488964 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
CYTH3-209ENST00000488964 PTF1AQ7RTS3 328 aa20.26■□□□□ 0.83
CYTH3-209ENST00000488964 NUDCQ9Y266 331 aa20.26■□□□□ 0.83
CYTH3-209ENST00000488964 KDRP35968 1356 aa20.25■□□□□ 0.83
CYTH3-209ENST00000488964 TXNRD1Q16881 649 aa20.25■□□□□ 0.83
CYTH3-209ENST00000488964 R3HDM1Q15032 1099 aaKnown RBP20.24■□□□□ 0.83
CYTH3-209ENST00000488964 SLC27A3Q5K4L6 730 aa20.24■□□□□ 0.83
CYTH3-209ENST00000488964 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
CYTH3-209ENST00000488964 U2SURPO15042 1029 aaKnown RBP20.23■□□□□ 0.83
CYTH3-209ENST00000488964 PHKG2P15735 406 aa20.23■□□□□ 0.83
CYTH3-209ENST00000488964 PPP2R1AP30153 589 aa20.23■□□□□ 0.83
CYTH3-209ENST00000488964 NKX1-1Q15270 411 aaPredicted RBP20.23■□□□□ 0.83
CYTH3-209ENST00000488964 ZNF530Q6P9A1 599 aaPredicted RBP20.23■□□□□ 0.83
CYTH3-209ENST00000488964 STK32BQ9NY57 414 aa20.23■□□□□ 0.83
CYTH3-209ENST00000488964 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
CYTH3-209ENST00000488964 AEBP1Q8IUX7 1158 aa20.22■□□□□ 0.83
CYTH3-209ENST00000488964 MPRIPQ6WCQ1 1025 aa20.21■□□□□ 0.83
CYTH3-209ENST00000488964 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
CYTH3-209ENST00000488964 TMOD3Q9NYL9 352 aa20.21■□□□□ 0.83
CYTH3-209ENST00000488964 HMOX1P09601 288 aa20.2■□□□□ 0.82
CYTH3-209ENST00000488964 RALBP1Q15311 655 aa20.2■□□□□ 0.82
CYTH3-209ENST00000488964 DCAF5Q96JK2 942 aa20.2■□□□□ 0.82
CYTH3-209ENST00000488964 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
CYTH3-209ENST00000488964 CCNL1Q9UK58 526 aaPredicted RBP20.17■□□□□ 0.82
CYTH3-209ENST00000488964 ITGB4P16144 1822 aa20.17■□□□□ 0.82
CYTH3-209ENST00000488964 ERVV-2B6SEH9 535 aa20.16■□□□□ 0.82
CYTH3-209ENST00000488964 AKAP4Q5JQC9 854 aa20.16■□□□□ 0.82
CYTH3-209ENST00000488964 PROM2Q8N271 834 aa20.16■□□□□ 0.82
CYTH3-209ENST00000488964 NEFMP07197 916 aa20.15■□□□□ 0.82
CYTH3-209ENST00000488964 PALLDQ8WX93 1383 aa20.15■□□□□ 0.82
CYTH3-209ENST00000488964 TOGARAM1Q9Y4F4 1720 aa20.15■□□□□ 0.82
CYTH3-209ENST00000488964 U2AF1L5P0DN76 240 aaPredicted RBP20.14■□□□□ 0.81
CYTH3-209ENST00000488964 U2AF1Q01081 240 aaKnown RBP eCLIP20.14■□□□□ 0.81
CYTH3-209ENST00000488964 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
CYTH3-209ENST00000488964 LY75O60449 1722 aa20.13■□□□□ 0.81
CYTH3-209ENST00000488964 CABP4P57796 275 aa20.13■□□□□ 0.81
CYTH3-209ENST00000488964 SLC15A2Q16348 729 aa20.13■□□□□ 0.81
CYTH3-209ENST00000488964 PIGBQ92521 554 aa20.13■□□□□ 0.81
CYTH3-209ENST00000488964 ANO8Q9HCE9 1232 aaPredicted RBP20.13■□□□□ 0.81
CYTH3-209ENST00000488964 LRP5O75197 1615 aa20.11■□□□□ 0.81
CYTH3-209ENST00000488964 PNNQ9H307 717 aaKnown RBP20.1■□□□□ 0.81
CYTH3-209ENST00000488964 PAPPAQ13219 1627 aa20.09■□□□□ 0.81
CYTH3-209ENST00000488964 MYBBP1AQ9BQG0 1328 aaKnown RBP20.09■□□□□ 0.81
CYTH3-209ENST00000488964 FCHSD2O94868 740 aa20.09■□□□□ 0.81
CYTH3-209ENST00000488964 LRRC4BQ9NT99 713 aa20.09■□□□□ 0.81
CYTH3-209ENST00000488964 ZNF316A6NFI3 1004 aaPredicted RBP20.08■□□□□ 0.81
CYTH3-209ENST00000488964 PRKAR2BP31323 418 aa20.08■□□□□ 0.81
CYTH3-209ENST00000488964 SPON1Q9HCB6 807 aa20.08■□□□□ 0.81
CYTH3-209ENST00000488964 TFCP2L1Q9NZI6 479 aa20.08■□□□□ 0.81
CYTH3-209ENST00000488964 KDM6AO15550 1401 aaPredicted RBP20.08■□□□□ 0.8
CYTH3-209ENST00000488964 MTHFSDQ2M296 383 aaKnown RBP20.07■□□□□ 0.8
CYTH3-209ENST00000488964 MAP3K5Q99683 1374 aa20.07■□□□□ 0.8
CYTH3-209ENST00000488964 SCN11AQ9UI33 1791 aa20.06■□□□□ 0.8
CYTH3-209ENST00000488964 LOC102724428A0A0B4J2F2 783 aa20.06■□□□□ 0.8
CYTH3-209ENST00000488964 SIK1P57059 783 aa20.06■□□□□ 0.8
CYTH3-209ENST00000488964 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
CYTH3-209ENST00000488964 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
CYTH3-209ENST00000488964 AKT1S1Q96B36 256 aa20.05■□□□□ 0.8
CYTH3-209ENST00000488964 AK7Q96M32 723 aa20.05■□□□□ 0.8
CYTH3-209ENST00000488964 ASAP1Q9ULH1 1129 aa20.05■□□□□ 0.8
CYTH3-209ENST00000488964 C5P01031 1676 aa20.04■□□□□ 0.8
CYTH3-209ENST00000488964 RNMTO43148 476 aaKnown RBP20.04■□□□□ 0.8
CYTH3-209ENST00000488964 ATG3Q9NT62 314 aa20.04■□□□□ 0.8
CYTH3-209ENST00000488964 PPP1R1BQ9UD71 204 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms