RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 SLC27A3Q5K4L6 730 aa36.18■■■■□ 3.38
RNF220-216ENST00000488865 SHANK3Q9BYB0 1731 aa36.17■■■■□ 3.38
RNF220-216ENST00000488865 MYOM1P52179 1685 aa36.16■■■■□ 3.38
RNF220-216ENST00000488865 INSRP06213 1382 aa36.16■■■■□ 3.38
RNF220-216ENST00000488865 PRIM1P49642 420 aaKnown RBP36.15■■■■□ 3.38
RNF220-216ENST00000488865 CARD14Q9BXL6 1004 aa36.15■■■■□ 3.38
RNF220-216ENST00000488865 FLT4P35916 1363 aa36.14■■■■□ 3.38
RNF220-216ENST00000488865 ZNF827Q17R98 1081 aa36.13■■■■□ 3.37
RNF220-216ENST00000488865 HSP90AB2PQ58FF8 381 aa36.13■■■■□ 3.37
RNF220-216ENST00000488865 SYTL4Q96C24 671 aaPredicted RBP36.13■■■■□ 3.37
RNF220-216ENST00000488865 DOT1LQ8TEK3 1739 aa36.12■■■■□ 3.37
RNF220-216ENST00000488865 RAPGEF4Q8WZA2 1011 aa36.12■■■■□ 3.37
RNF220-216ENST00000488865 SGIP1Q9BQI5 828 aa36.12■■■■□ 3.37
RNF220-216ENST00000488865 NSD3Q9BZ95 1437 aa36.11■■■■□ 3.37
RNF220-216ENST00000488865 USHBP1Q8N6Y0 703 aa36.1■■■■□ 3.37
RNF220-216ENST00000488865 AKT1S1Q96B36 256 aa36.1■■■■□ 3.37
RNF220-216ENST00000488865 NSD2O96028 1365 aa36.1■■■■□ 3.37
RNF220-216ENST00000488865 YY1P25490 414 aa36.09■■■■□ 3.37
RNF220-216ENST00000488865 PCGF6Q9BYE7 350 aa36.09■■■■□ 3.37
RNF220-216ENST00000488865 TATP17735 454 aaPredicted RBP36.07■■■■□ 3.36
RNF220-216ENST00000488865 LY75O60449 1722 aa36.05■■■■□ 3.36
RNF220-216ENST00000488865 FHDC1Q9C0D6 1143 aaPredicted RBP36.05■■■■□ 3.36
RNF220-216ENST00000488865 QSER1Q2KHR3 1735 aa36.05■■■■□ 3.36
RNF220-216ENST00000488865 SYT17Q9BSW7 474 aa36.04■■■■□ 3.36
RNF220-216ENST00000488865 SLC16A10Q8TF71 515 aa36.03■■■■□ 3.36
RNF220-216ENST00000488865 EMILIN1Q9Y6C2 1016 aa36.02■■■■□ 3.36
RNF220-216ENST00000488865 ARXQ96QS3 562 aa36.01■■■■□ 3.36
RNF220-216ENST00000488865 PCDH11XQ9BZA7 1347 aa36.01■■■■□ 3.35
RNF220-216ENST00000488865 PCDH11YQ9BZA8 1340 aa36.01■■■■□ 3.35
RNF220-216ENST00000488865 KCNQ4P56696 695 aa35.98■■■■□ 3.35
RNF220-216ENST00000488865 TFCP2L1Q9NZI6 479 aa35.98■■■■□ 3.35
RNF220-216ENST00000488865 PNPLA7Q6ZV29 1317 aa35.97■■■■□ 3.35
RNF220-216ENST00000488865 ANKRD26Q9UPS8 1709 aa35.97■■■■□ 3.35
RNF220-216ENST00000488865 CCNL1Q9UK58 526 aaPredicted RBP35.96■■■■□ 3.35
RNF220-216ENST00000488865 MAP3K5Q99683 1374 aa35.96■■■■□ 3.35
RNF220-216ENST00000488865 NCAPD2Q15021 1401 aa35.94■■■■□ 3.34
RNF220-216ENST00000488865 WASHC2AQ641Q2 1341 aa35.94■■■■□ 3.34
RNF220-216ENST00000488865 PPM1GO15355 546 aaPredicted RBP35.93■■■■□ 3.34
RNF220-216ENST00000488865 TUBGCP6Q96RT7 1819 aa35.92■■■■□ 3.34
RNF220-216ENST00000488865 CYP27B1O15528 508 aa35.91■■■■□ 3.34
RNF220-216ENST00000488865 COL24A1Q17RW2 1714 aa35.91■■■■□ 3.34
RNF220-216ENST00000488865 MAP2P11137 1827 aaKnown RBP35.9■■■■□ 3.34
RNF220-216ENST00000488865 PKD1L3Q7Z443 1732 aa35.89■■■■□ 3.34
RNF220-216ENST00000488865 HMGB2P26583 209 aaKnown RBP35.89■■■■□ 3.34
RNF220-216ENST00000488865 POLD1P28340 1107 aa35.89■■■■□ 3.34
RNF220-216ENST00000488865 EIF4G2P78344 907 aaKnown RBP eCLIP35.89■■■■□ 3.34
RNF220-216ENST00000488865 POLR3GLQ9BT43 218 aa35.88■■■■□ 3.33
RNF220-216ENST00000488865 POLKQ9UBT6 870 aa35.87■■■■□ 3.33
RNF220-216ENST00000488865 UTRNP46939 3433 aa35.86■■■■□ 3.33
RNF220-216ENST00000488865 MPRIPQ6WCQ1 1025 aa35.85■■■■□ 3.33
RNF220-216ENST00000488865 EYA1Q99502 592 aa35.84■■■■□ 3.33
RNF220-216ENST00000488865 SPG7Q9UQ90 795 aa35.84■■■■□ 3.33
RNF220-216ENST00000488865 NKX1-1Q15270 411 aaPredicted RBP35.83■■■■□ 3.33
RNF220-216ENST00000488865 PALLDQ8WX93 1383 aa35.83■■■■□ 3.33
RNF220-216ENST00000488865 HSPA5P11021 654 aaKnown RBP35.82■■■■□ 3.32
RNF220-216ENST00000488865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.82■■■■□ 3.32
RNF220-216ENST00000488865 TOGARAM1Q9Y4F4 1720 aa35.82■■■■□ 3.32
RNF220-216ENST00000488865 SMARCC1Q92922 1105 aaPredicted RBP35.8■■■■□ 3.32
RNF220-216ENST00000488865 C5P01031 1676 aa35.8■■■■□ 3.32
RNF220-216ENST00000488865 ITGB4P16144 1822 aa35.8■■■■□ 3.32
RNF220-216ENST00000488865 COL23A1Q86Y22 540 aaPredicted RBP35.79■■■■□ 3.32
RNF220-216ENST00000488865 CCER1Q8TC90 406 aaPredicted RBP35.78■■■■□ 3.32
RNF220-216ENST00000488865 PANK3Q9H999 370 aa35.77■■■■□ 3.32
RNF220-216ENST00000488865 MSH5O43196 834 aa35.75■■■■□ 3.31
RNF220-216ENST00000488865 TNNT2P45379 298 aaPredicted RBP35.75■■■■□ 3.31
RNF220-216ENST00000488865 PIGBQ92521 554 aa35.75■■■■□ 3.31
RNF220-216ENST00000488865 TAF1LQ8IZX4 1826 aa35.75■■■■□ 3.31
RNF220-216ENST00000488865 EIF4A2Q14240 407 aaKnown RBP35.74■■■■□ 3.31
RNF220-216ENST00000488865 FLAD1Q8NFF5 587 aa35.74■■■■□ 3.31
RNF220-216ENST00000488865 PLEKHG2Q9H7P9 1386 aa35.74■■■■□ 3.31
RNF220-216ENST00000488865 KLHL34Q8N239 644 aa35.73■■■■□ 3.31
RNF220-216ENST00000488865 CHD4Q14839 1912 aa35.72■■■■□ 3.31
RNF220-216ENST00000488865 IFNL2Q8IZJ0 200 aa35.71■■■■□ 3.31
RNF220-216ENST00000488865 GPR162Q16538 588 aa35.7■■■■□ 3.31
RNF220-216ENST00000488865 PHKG2P15735 406 aa35.69■■■■□ 3.3
RNF220-216ENST00000488865 C4BP0C0L5 1744 aa35.68■■■■□ 3.3
RNF220-216ENST00000488865 TMOD3Q9NYL9 352 aa35.67■■■■□ 3.3
RNF220-216ENST00000488865 ZNF784Q8NCA9 323 aaPredicted RBP35.66■■■■□ 3.3
RNF220-216ENST00000488865 IGSF1Q8N6C5 1336 aa35.65■■■■□ 3.3
RNF220-216ENST00000488865 AK7Q96M32 723 aa35.65■■■■□ 3.3
RNF220-216ENST00000488865 GOLGB1Q14789 3259 aaKnown RBP35.65■■■■□ 3.3
RNF220-216ENST00000488865 NLGN2Q8NFZ4 835 aa35.64■■■■□ 3.3
RNF220-216ENST00000488865 LOC102724428A0A0B4J2F2 783 aa35.63■■■■□ 3.29
RNF220-216ENST00000488865 SIK1P57059 783 aa35.63■■■■□ 3.29
RNF220-216ENST00000488865 MSL1Q68DK7 614 aa35.63■■■■□ 3.29
RNF220-216ENST00000488865 MORC1Q86VD1 984 aa35.59■■■■□ 3.29
RNF220-216ENST00000488865 ASAP1Q9ULH1 1129 aa35.59■■■■□ 3.29
RNF220-216ENST00000488865 UBR3Q6ZT12 1888 aa35.58■■■■□ 3.29
RNF220-216ENST00000488865 AMIGO3Q86WK7 504 aa35.57■■■■□ 3.28
RNF220-216ENST00000488865 PELP1Q8IZL8 1130 aaKnown RBP35.57■■■■□ 3.28
RNF220-216ENST00000488865 LINC00116Q8NCU8 138 aa35.56■■■■□ 3.28
RNF220-216ENST00000488865 KNSTRNQ9Y448 316 aa35.56■■■■□ 3.28
RNF220-216ENST00000488865 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.55■■■■□ 3.28
RNF220-216ENST00000488865 ERVV-2B6SEH9 535 aa35.55■■■■□ 3.28
RNF220-216ENST00000488865 HSP90AB1P08238 724 aaKnown RBP35.55■■■■□ 3.28
RNF220-216ENST00000488865 SSFA2P28290 1259 aa35.55■■■■□ 3.28
RNF220-216ENST00000488865 PLEKHO1Q53GL0 409 aaPredicted RBP35.55■■■■□ 3.28
RNF220-216ENST00000488865 ATG3Q9NT62 314 aa35.55■■■■□ 3.28
RNF220-216ENST00000488865 CD2APQ9Y5K6 639 aa35.54■■■■□ 3.28
RNF220-216ENST00000488865 ATP6V1AP38606 617 aa35.53■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms