RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 GMPR2Q9P2T1 348 aaKnown RBP6.43□□□□□ -1.38
RBM28-207ENST00000488249 TIMELESSQ9UNS1 1208 aa6.43□□□□□ -1.38
RBM28-207ENST00000488249 USP17L5A8MUK1 530 aa6.42□□□□□ -1.38
RBM28-207ENST00000488249 ATP9BO43861 1147 aa6.42□□□□□ -1.38
RBM28-207ENST00000488249 LZTS3O60299 673 aaPredicted RBP6.42□□□□□ -1.38
RBM28-207ENST00000488249 BMP2P12643 396 aa6.42□□□□□ -1.38
RBM28-207ENST00000488249 PTGIRP43119 386 aa6.42□□□□□ -1.38
RBM28-207ENST00000488249 RELBQ01201 579 aa6.42□□□□□ -1.38
RBM28-207ENST00000488249 CYP2U1Q7Z449 544 aa6.42□□□□□ -1.38
RBM28-207ENST00000488249 SIRT1Q96EB6 747 aa6.42□□□□□ -1.38
RBM28-207ENST00000488249 SENP2Q9HC62 589 aa6.42□□□□□ -1.38
RBM28-207ENST00000488249 POTECB2RU33 542 aa6.41□□□□□ -1.38
RBM28-207ENST00000488249 ATP5J2-PTCD1G3V325 749 aa6.41□□□□□ -1.38
RBM28-207ENST00000488249 SPINT1O43278 529 aa6.41□□□□□ -1.38
RBM28-207ENST00000488249 EML3Q32P44 896 aa6.41□□□□□ -1.38
RBM28-207ENST00000488249 DEPDC4Q8N2C3 294 aa6.41□□□□□ -1.38
RBM28-207ENST00000488249 KIFC2Q96AC6 838 aa6.41□□□□□ -1.38
RBM28-207ENST00000488249 PPP1R12CQ9BZL4 782 aa6.41□□□□□ -1.38
RBM28-207ENST00000488249 ZNF395Q9H8N7 513 aaPredicted RBP6.41□□□□□ -1.38
RBM28-207ENST00000488249 TFIP11Q9UBB9 837 aaKnown RBP6.41□□□□□ -1.38
RBM28-207ENST00000488249 USP17L3A6NCW0 530 aa6.4□□□□□ -1.38
RBM28-207ENST00000488249 USP17L4A6NCW7 530 aa6.4□□□□□ -1.38
RBM28-207ENST00000488249 PALM3A6NDB9 673 aaPredicted RBP6.4□□□□□ -1.38
RBM28-207ENST00000488249 C11orf95C9JLR9 678 aaPredicted RBP6.4□□□□□ -1.38
RBM28-207ENST00000488249 NCOA4Q13772 614 aa6.4□□□□□ -1.38
RBM28-207ENST00000488249 ZNF787Q6DD87 383 aa6.4□□□□□ -1.38
RBM28-207ENST00000488249 USP17L2Q6R6M4 530 aa6.4□□□□□ -1.38
RBM28-207ENST00000488249 USP17L1Q7RTZ2 530 aa6.4□□□□□ -1.38
RBM28-207ENST00000488249 PLEKHM2Q8IWE5 1019 aa6.4□□□□□ -1.38
RBM28-207ENST00000488249 TRIM47Q96LD4 638 aa6.4□□□□□ -1.38
RBM28-207ENST00000488249 ARID3CA6NKF2 412 aa6.39□□□□□ -1.39
RBM28-207ENST00000488249 GNRH1P01148 92 aa6.39□□□□□ -1.39
RBM28-207ENST00000488249 NOD1Q9Y239 953 aa6.39□□□□□ -1.39
RBM28-207ENST00000488249 MAFBQ9Y5Q3 323 aaPredicted RBP6.39□□□□□ -1.39
RBM28-207ENST00000488249 A0A1W2PRU2 124 aa6.38□□□□□ -1.39
RBM28-207ENST00000488249 SNRPBP14678 240 aaKnown RBP6.38□□□□□ -1.39
RBM28-207ENST00000488249 INSM2Q96T92 566 aaPredicted RBP6.38□□□□□ -1.39
RBM28-207ENST00000488249 SOS2Q07890 1332 aaPredicted RBP6.38□□□□□ -1.39
RBM28-207ENST00000488249 CTSOP43234 321 aaPredicted RBP6.37□□□□□ -1.39
RBM28-207ENST00000488249 ARHGEF10LQ9HCE6 1279 aa6.37□□□□□ -1.39
RBM28-207ENST00000488249 PCDHGA11Q9Y5H2 935 aa6.37□□□□□ -1.39
RBM28-207ENST00000488249 TTLL8A6PVC2 850 aa6.36□□□□□ -1.39
RBM28-207ENST00000488249 MEN1O00255 615 aa6.36□□□□□ -1.39
RBM28-207ENST00000488249 LMOD1P29536 600 aaPredicted RBP6.36□□□□□ -1.39
RBM28-207ENST00000488249 GTF2IP78347 998 aa6.36□□□□□ -1.39
RBM28-207ENST00000488249 CLN3Q13286 438 aa6.36□□□□□ -1.39
RBM28-207ENST00000488249 CFAP70Q5T0N1 1121 aa6.36□□□□□ -1.39
RBM28-207ENST00000488249 TRIM50Q86XT4 487 aa6.36□□□□□ -1.39
RBM28-207ENST00000488249 POLMQ9NP87 494 aaPredicted RBP6.36□□□□□ -1.39
RBM28-207ENST00000488249 RAB6BQ9NRW1 208 aa6.36□□□□□ -1.39
RBM28-207ENST00000488249 MKRN1Q9UHC7 482 aaKnown RBP6.36□□□□□ -1.39
RBM28-207ENST00000488249 MAN1A2O60476 641 aa6.35□□□□□ -1.39
RBM28-207ENST00000488249 STAU1O95793 577 aaKnown RBP6.35□□□□□ -1.39
RBM28-207ENST00000488249 ESCO1Q5FWF5 840 aa6.35□□□□□ -1.39
RBM28-207ENST00000488249 FOXD4L5Q5VV16 416 aaPredicted RBP6.35□□□□□ -1.39
RBM28-207ENST00000488249 CNKSR1Q969H4 720 aa6.35□□□□□ -1.39
RBM28-207ENST00000488249 CCDC97Q96F63 343 aaPredicted RBP6.35□□□□□ -1.39
RBM28-207ENST00000488249 XAGE2Q96GT9 111 aa6.35□□□□□ -1.39
RBM28-207ENST00000488249 NLRP3Q96P20 1036 aa6.35□□□□□ -1.39
RBM28-207ENST00000488249 ESYT1Q9BSJ8 1104 aa6.35□□□□□ -1.39
RBM28-207ENST00000488249 C1orf115Q9H7X2 142 aa6.35□□□□□ -1.39
RBM28-207ENST00000488249 ETNK1Q9HBU6 452 aa6.35□□□□□ -1.39
RBM28-207ENST00000488249 SERPINA10Q9UK55 444 aa6.35□□□□□ -1.39
RBM28-207ENST00000488249 FIGNL2A6NMB9 653 aa6.34□□□□□ -1.39
RBM28-207ENST00000488249 SOBPA7XYQ1 873 aa6.34□□□□□ -1.39
RBM28-207ENST00000488249 IL2RAP01589 272 aa6.34□□□□□ -1.39
RBM28-207ENST00000488249 GPC1P35052 558 aa6.34□□□□□ -1.39
RBM28-207ENST00000488249 RNF144AP50876 292 aaPredicted RBP6.34□□□□□ -1.39
RBM28-207ENST00000488249 ATP1A2P50993 1020 aa6.34□□□□□ -1.39
RBM28-207ENST00000488249 SCNN1DP51172 638 aa6.34□□□□□ -1.39
RBM28-207ENST00000488249 GDF10P55107 478 aa6.34□□□□□ -1.39
RBM28-207ENST00000488249 KANK4Q5T7N3 995 aaPredicted RBP6.34□□□□□ -1.39
RBM28-207ENST00000488249 RNF217Q8TC41 542 aa6.34□□□□□ -1.39
RBM28-207ENST00000488249 DNMT3LQ9UJW3 386 aa6.34□□□□□ -1.39
RBM28-207ENST00000488249 TMEM229AB2RXF0 380 aa6.33□□□□□ -1.4
RBM28-207ENST00000488249 WASLO00401 505 aaPredicted RBP6.33□□□□□ -1.4
RBM28-207ENST00000488249 ZBTB7BO15156 539 aaPredicted RBP6.33□□□□□ -1.4
RBM28-207ENST00000488249 INHAP05111 366 aa6.33□□□□□ -1.4
RBM28-207ENST00000488249 RFX1P22670 979 aa6.33□□□□□ -1.4
RBM28-207ENST00000488249 CLDN10P78369 228 aa6.33□□□□□ -1.4
RBM28-207ENST00000488249 PSME1Q06323 249 aa6.33□□□□□ -1.4
RBM28-207ENST00000488249 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.33□□□□□ -1.42e-6■□□□□ 8.3
RBM28-207ENST00000488249 OGFOD1Q8N543 542 aa6.33□□□□□ -1.4
RBM28-207ENST00000488249 VRTNQ9H8Y1 702 aa6.33□□□□□ -1.4
RBM28-207ENST00000488249 DNAAF2Q9NVR5 837 aaKnown RBP6.33□□□□□ -1.4
RBM28-207ENST00000488249 HRH3Q9Y5N1 445 aa6.33□□□□□ -1.4
RBM28-207ENST00000488249 SUPT5HO00267 1087 aaKnown RBP6.32□□□□□ -1.4
RBM28-207ENST00000488249 RASA1P20936 1047 aa6.32□□□□□ -1.4
RBM28-207ENST00000488249 CENPCQ03188 943 aa6.32□□□□□ -1.4
RBM28-207ENST00000488249 LARGE2Q8N3Y3 721 aa6.32□□□□□ -1.4
RBM28-207ENST00000488249 CCDC82Q8N4S0 544 aa6.32□□□□□ -1.4
RBM28-207ENST00000488249 GRIP2Q9C0E4 1043 aa6.32□□□□□ -1.4
RBM28-207ENST00000488249 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
RBM28-207ENST00000488249 SLC27A3Q5K4L6 730 aa6.31□□□□□ -1.4
RBM28-207ENST00000488249 CCDC102BQ68D86 513 aa6.31□□□□□ -1.4
RBM28-207ENST00000488249 LARP1Q6PKG0 1096 aaKnown RBP6.31□□□□□ -1.4
RBM28-207ENST00000488249 LYSMD3Q7Z3D4 306 aa6.31□□□□□ -1.4
RBM28-207ENST00000488249 PRICKLE2Q7Z3G6 844 aa6.31□□□□□ -1.4
RBM28-207ENST00000488249 TPCN2Q8NHX9 752 aa6.31□□□□□ -1.4
RBM28-207ENST00000488249 FHDC1Q9C0D6 1143 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms