RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ANKRD26Q9UPS8 1709 aa26.77■■□□□ 1.88
CD55-209ENST00000488171 CGNL1Q0VF96 1302 aa26.77■■□□□ 1.88
CD55-209ENST00000488171 PDGFDQ9GZP0 370 aaPredicted RBP26.76■■□□□ 1.87
CD55-209ENST00000488171 SPON1Q9HCB6 807 aa26.76■■□□□ 1.87
CD55-209ENST00000488171 PAPPAQ13219 1627 aa26.75■■□□□ 1.87
CD55-209ENST00000488171 DOT1LQ8TEK3 1739 aa26.75■■□□□ 1.87
CD55-209ENST00000488171 STK32BQ9NY57 414 aa26.74■■□□□ 1.87
CD55-209ENST00000488171 KAT6BQ8WYB5 2073 aa26.73■■□□□ 1.87
CD55-209ENST00000488171 SLC15A2Q16348 729 aa26.73■■□□□ 1.87
CD55-209ENST00000488171 RAPGEF4Q8WZA2 1011 aa26.71■■□□□ 1.87
CD55-209ENST00000488171 NSD2O96028 1365 aa26.71■■□□□ 1.87
CD55-209ENST00000488171 PRIM1P49642 420 aaKnown RBP26.71■■□□□ 1.87
CD55-209ENST00000488171 MAP2P11137 1827 aaKnown RBP26.7■■□□□ 1.87
CD55-209ENST00000488171 LRRC4BQ9NT99 713 aa26.7■■□□□ 1.86
CD55-209ENST00000488171 PPM1GO15355 546 aaPredicted RBP26.69■■□□□ 1.86
CD55-209ENST00000488171 TATP17735 454 aaPredicted RBP26.69■■□□□ 1.86
CD55-209ENST00000488171 NCAPD2Q15021 1401 aa26.68■■□□□ 1.86
CD55-209ENST00000488171 SYTL4Q96C24 671 aaPredicted RBP26.68■■□□□ 1.86
CD55-209ENST00000488171 WASHC2AQ641Q2 1341 aa26.67■■□□□ 1.86
CD55-209ENST00000488171 ZBTB7AO95365 584 aa26.67■■□□□ 1.86
CD55-209ENST00000488171 PANK3Q9H999 370 aa26.67■■□□□ 1.86
CD55-209ENST00000488171 POLKQ9UBT6 870 aa26.67■■□□□ 1.86
CD55-209ENST00000488171 PPP1R1BQ9UD71 204 aaPredicted RBP26.66■■□□□ 1.86
CD55-209ENST00000488171 ZNF827Q17R98 1081 aa26.65■■□□□ 1.86
CD55-209ENST00000488171 LY75O60449 1722 aa26.65■■□□□ 1.86
CD55-209ENST00000488171 PCDH11XQ9BZA7 1347 aa26.63■■□□□ 1.85
CD55-209ENST00000488171 PCDH11YQ9BZA8 1340 aa26.63■■□□□ 1.85
CD55-209ENST00000488171 PKD1L3Q7Z443 1732 aa26.63■■□□□ 1.85
CD55-209ENST00000488171 SLC27A3Q5K4L6 730 aa26.63■■□□□ 1.85
CD55-209ENST00000488171 PTGER2P43116 358 aa26.62■■□□□ 1.85
CD55-209ENST00000488171 TNNT2P45379 298 aaPredicted RBP26.61■■□□□ 1.85
CD55-209ENST00000488171 ATF5Q9Y2D1 282 aaPredicted RBP26.61■■□□□ 1.85
CD55-209ENST00000488171 CYP27B1O15528 508 aa26.6■■□□□ 1.85
CD55-209ENST00000488171 EYA1Q99502 592 aa26.6■■□□□ 1.85
CD55-209ENST00000488171 KCNQ4P56696 695 aa26.59■■□□□ 1.85
CD55-209ENST00000488171 AKT1S1Q96B36 256 aa26.59■■□□□ 1.85
CD55-209ENST00000488171 MTFR1LQ9H019 292 aa26.58■■□□□ 1.85
CD55-209ENST00000488171 TOGARAM1Q9Y4F4 1720 aa26.58■■□□□ 1.85
CD55-209ENST00000488171 QSER1Q2KHR3 1735 aa26.57■■□□□ 1.84
CD55-209ENST00000488171 EIF4A2Q14240 407 aaKnown RBP26.56■■□□□ 1.84
CD55-209ENST00000488171 SGIP1Q9BQI5 828 aa26.56■■□□□ 1.84
CD55-209ENST00000488171 TUBGCP6Q96RT7 1819 aa26.55■■□□□ 1.84
CD55-209ENST00000488171 CCNL1Q9UK58 526 aaPredicted RBP26.53■■□□□ 1.84
CD55-209ENST00000488171 ITGB4P16144 1822 aa26.52■■□□□ 1.84
CD55-209ENST00000488171 SPG7Q9UQ90 795 aa26.52■■□□□ 1.84
CD55-209ENST00000488171 KIF7Q2M1P5 1343 aa26.52■■□□□ 1.84
CD55-209ENST00000488171 NKX1-1Q15270 411 aaPredicted RBP26.51■■□□□ 1.83
CD55-209ENST00000488171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.51■■□□□ 1.831e-7■■■□□ 16.2
CD55-209ENST00000488171 PNPLA7Q6ZV29 1317 aa26.51■■□□□ 1.83
CD55-209ENST00000488171 MPRIPQ6WCQ1 1025 aa26.5■■□□□ 1.83
CD55-209ENST00000488171 MORC1Q86VD1 984 aa26.49■■□□□ 1.83
CD55-209ENST00000488171 IGSF1Q8N6C5 1336 aa26.48■■□□□ 1.83
CD55-209ENST00000488171 TFCP2L1Q9NZI6 479 aa26.48■■□□□ 1.83
CD55-209ENST00000488171 KNSTRNQ9Y448 316 aa26.48■■□□□ 1.83
CD55-209ENST00000488171 PALLDQ8WX93 1383 aa26.47■■□□□ 1.83
CD55-209ENST00000488171 C5P01031 1676 aa26.47■■□□□ 1.83
CD55-209ENST00000488171 FHDC1Q9C0D6 1143 aaPredicted RBP26.46■■□□□ 1.83
CD55-209ENST00000488171 COL24A1Q17RW2 1714 aa26.46■■□□□ 1.83
CD55-209ENST00000488171 PLEKHG2Q9H7P9 1386 aa26.46■■□□□ 1.83
CD55-209ENST00000488171 AMER1Q5JTC6 1135 aaPredicted RBP26.46■■□□□ 1.83
CD55-209ENST00000488171 SLC16A10Q8TF71 515 aa26.46■■□□□ 1.83
CD55-209ENST00000488171 PHKG2P15735 406 aa26.45■■□□□ 1.82
CD55-209ENST00000488171 PIGBQ92521 554 aa26.45■■□□□ 1.82
CD55-209ENST00000488171 TAF1LQ8IZX4 1826 aa26.44■■□□□ 1.82
CD55-209ENST00000488171 ARXQ96QS3 562 aa26.44■■□□□ 1.82
CD55-209ENST00000488171 SYT17Q9BSW7 474 aa26.44■■□□□ 1.82
CD55-209ENST00000488171 IFNL2Q8IZJ0 200 aa26.43■■□□□ 1.82
CD55-209ENST00000488171 SMARCC1Q92922 1105 aaPredicted RBP26.41■■□□□ 1.82
CD55-209ENST00000488171 DCAF8L1A6NGE4 600 aa26.38■■□□□ 1.81
CD55-209ENST00000488171 PER1O15534 1290 aaPredicted RBP26.38■■□□□ 1.81
CD55-209ENST00000488171 COL23A1Q86Y22 540 aaPredicted RBP26.38■■□□□ 1.81
CD55-209ENST00000488171 MAP3K5Q99683 1374 aa26.38■■□□□ 1.81
CD55-209ENST00000488171 C4BP0C0L5 1744 aa26.37■■□□□ 1.81
CD55-209ENST00000488171 TMOD3Q9NYL9 352 aa26.37■■□□□ 1.81
CD55-209ENST00000488171 AEBP1Q8IUX7 1158 aa26.36■■□□□ 1.81
CD55-209ENST00000488171 HMGB2P26583 209 aaKnown RBP26.34■■□□□ 1.81
CD55-209ENST00000488171 POLD1P28340 1107 aa26.34■■□□□ 1.81
CD55-209ENST00000488171 IL13P35225 146 aa26.34■■□□□ 1.81
CD55-209ENST00000488171 ASAP1Q9ULH1 1129 aa26.34■■□□□ 1.81
CD55-209ENST00000488171 PLEKHO1Q53GL0 409 aaPredicted RBP26.33■■□□□ 1.81
CD55-209ENST00000488171 LOC102724428A0A0B4J2F2 783 aa26.33■■□□□ 1.8
CD55-209ENST00000488171 MSH5O43196 834 aa26.33■■□□□ 1.8
CD55-209ENST00000488171 SIK1P57059 783 aa26.33■■□□□ 1.8
CD55-209ENST00000488171 KDRP35968 1356 aa26.32■■□□□ 1.8
CD55-209ENST00000488171 YY1P25490 414 aa26.32■■□□□ 1.8
CD55-209ENST00000488171 AMOTQ4VCS5 1084 aa26.32■■□□□ 1.8
CD55-209ENST00000488171 SULT6B1Q6IMI4 303 aa26.32■■□□□ 1.8
CD55-209ENST00000488171 KDM6AO15550 1401 aaPredicted RBP26.31■■□□□ 1.8
CD55-209ENST00000488171 ZNF530Q6P9A1 599 aaPredicted RBP26.31■■□□□ 1.8
CD55-209ENST00000488171 AMIGO3Q86WK7 504 aa26.31■■□□□ 1.8
CD55-209ENST00000488171 DCAF5Q96JK2 942 aa26.31■■□□□ 1.8
CD55-209ENST00000488171 ATG3Q9NT62 314 aa26.31■■□□□ 1.8
CD55-209ENST00000488171 UBR3Q6ZT12 1888 aa26.3■■□□□ 1.8
CD55-209ENST00000488171 ERVV-2B6SEH9 535 aa26.3■■□□□ 1.8
CD55-209ENST00000488171 HSP90AB1P08238 724 aaKnown RBP26.3■■□□□ 1.8
CD55-209ENST00000488171 MTHFSP49914 203 aa26.3■■□□□ 1.8
CD55-209ENST00000488171 CC2D1BQ5T0F9 858 aaKnown RBP26.29■■□□□ 1.8
CD55-209ENST00000488171 LINC00116Q8NCU8 138 aa26.29■■□□□ 1.8
CD55-209ENST00000488171 FLAD1Q8NFF5 587 aa26.29■■□□□ 1.8
CD55-209ENST00000488171 AK7Q96M32 723 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms