RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 NSD3Q9BZ95 1437 aa4.06□□□□□ -1.76
DEPDC1-203ENST00000488146 LY75O60449 1722 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 SPATA31A1Q5TZJ5 1347 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 NFAT5O94916 1531 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 IRX5P78411 483 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 CRB1P82279 1406 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 TNS2Q63HR2 1409 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 FBXO22Q8NEZ5 403 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 CHD4Q14839 1912 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 TTC21AQ8NDW8 1320 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 RBM26Q5T8P6 1007 aaKnown RBP4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 KRT28Q7Z3Y7 464 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 SLAIN1Q8ND83 568 aa4.05□□□□□ -1.76
DEPDC1-203ENST00000488146 MLLT3P42568 568 aaPredicted RBP4.04□□□□□ -1.76
DEPDC1-203ENST00000488146 MS4A4AQ96JQ5 239 aa4.04□□□□□ -1.76
DEPDC1-203ENST00000488146 C8orf37Q96NL8 207 aa4.04□□□□□ -1.76
DEPDC1-203ENST00000488146 COL5A2P05997 1499 aaPredicted RBP4.04□□□□□ -1.76
DEPDC1-203ENST00000488146 ANKRD26Q9UPS8 1709 aa4.04□□□□□ -1.76
DEPDC1-203ENST00000488146 CAMKK2Q96RR4 588 aa4.04□□□□□ -1.76
DEPDC1-203ENST00000488146 OCEL1Q9H607 264 aa4.04□□□□□ -1.76
DEPDC1-203ENST00000488146 RTL1A6NKG5 1358 aa4.04□□□□□ -1.76
DEPDC1-203ENST00000488146 NCAPD2Q15021 1401 aa4.03□□□□□ -1.76
DEPDC1-203ENST00000488146 KIF13BQ9NQT8 1826 aa4.03□□□□□ -1.76
DEPDC1-203ENST00000488146 NBPF8Q3BBV2 869 aa4.03□□□□□ -1.76
DEPDC1-203ENST00000488146 NBPF14Q5TI25 921 aa4.03□□□□□ -1.76
DEPDC1-203ENST00000488146 SLC16A10Q8TF71 515 aa4.03□□□□□ -1.76
DEPDC1-203ENST00000488146 ZNF326Q5BKZ1 582 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-203ENST00000488146 SEPT12Q8IYM1 358 aa4.03□□□□□ -1.76
DEPDC1-203ENST00000488146 TRIM52Q96A61 297 aa4.03□□□□□ -1.76
DEPDC1-203ENST00000488146 CPSF1Q10570 1443 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-203ENST00000488146 TESPA1A2RU30 521 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 NUTM2BA6NNL0 878 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 NUTM2EB1AL46 878 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 WASLO00401 505 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 FAM50AQ14320 339 aaKnown RBP4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 NUTM2DQ5VT03 806 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 NUTM2AQ8IVF1 878 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 IL27Q8NEV9 243 aa4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 C5P01031 1676 aa4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 ARHGEF1Q92888 912 aaKnown RBP4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 CGNL1Q0VF96 1302 aa4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 USP6P35125 1406 aa4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 MYOM1P52179 1685 aa4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 PKD1L3Q7Z443 1732 aa4.02□□□□□ -1.77
DEPDC1-203ENST00000488146 GOLGA2Q08379 1002 aa4.01□□□□□ -1.77
DEPDC1-203ENST00000488146 KIAA0232Q92628 1395 aa4.01□□□□□ -1.77
DEPDC1-203ENST00000488146 ADGRF5Q8IZF2 1346 aa4.01□□□□□ -1.77
DEPDC1-203ENST00000488146 KCNH5Q8NCM2 988 aa4.01□□□□□ -1.77
DEPDC1-203ENST00000488146 MKRN3Q13064 507 aaKnown RBP4□□□□□ -1.77
DEPDC1-203ENST00000488146 ESCO1Q5FWF5 840 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 RBM33Q96EV2 1170 aaKnown RBP4□□□□□ -1.77
DEPDC1-203ENST00000488146 ORAI2Q96SN7 254 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 MPHOSPH9Q99550 1183 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 EIF2AK3Q9NZJ5 1116 aaKnown RBP4□□□□□ -1.77
DEPDC1-203ENST00000488146 PLEKHH1Q9ULM0 1364 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 KCNQ2O43526 872 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 ST18O60284 1047 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 NLRP6P59044 892 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 SLC27A3Q5K4L6 730 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 TCP11L2Q8N4U5 519 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 CHIC2Q9UKJ5 165 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 SHANK3Q9BYB0 1731 aa4□□□□□ -1.77
DEPDC1-203ENST00000488146 SPON1Q9HCB6 807 aa3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 SMG6Q86US8 1419 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 ADCY9O60503 1353 aa3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 ZMYND10O75800 440 aa3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 NLRP13Q86W25 1043 aa3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 CDAN1Q8IWY9 1227 aa3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 DDX27Q96GQ7 796 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 ARID3AQ99856 593 aa3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 CARD10Q9BWT7 1032 aa3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 EDC4Q6P2E9 1401 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-203ENST00000488146 DPYSL4O14531 572 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 PDCD7Q8N8D1 485 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 BTAF1O14981 1849 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 WDR17Q8IZU2 1322 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 ZC3H4Q9UPT8 1303 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 FAM83GA6ND36 823 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 SNPHO15079 494 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 DPY19L2Q6NUT2 758 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 FLAD1Q8NFF5 587 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 ARXQ96QS3 562 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 PPIP5K1Q6PFW1 1433 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 PRR36Q9H6K5 1346 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 TNRC6CQ9HCJ0 1690 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 TUBGCP6Q96RT7 1819 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 C3orf67Q6ZVT6 689 aa3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 KRI1Q8N9T8 703 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 L3MBTL3Q96JM7 780 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.98□□□□□ -1.77
DEPDC1-203ENST00000488146 MAP3K19Q56UN5 1328 aa3.97□□□□□ -1.77
DEPDC1-203ENST00000488146 PXDNLA1KZ92 1463 aa3.97□□□□□ -1.77
DEPDC1-203ENST00000488146 LTN1O94822 1766 aa3.97□□□□□ -1.77
DEPDC1-203ENST00000488146 MTFR1LQ9H019 292 aa3.97□□□□□ -1.77
DEPDC1-203ENST00000488146 KIF20BQ96Q89 1820 aa3.97□□□□□ -1.77
DEPDC1-203ENST00000488146 ADAMTS2O95450 1211 aa3.97□□□□□ -1.77
DEPDC1-203ENST00000488146 CRISPLD2Q9H0B8 497 aa3.97□□□□□ -1.77
DEPDC1-203ENST00000488146 KIAA1551Q9HCM1 1747 aa3.96□□□□□ -1.77
DEPDC1-203ENST00000488146 TAF1LQ8IZX4 1826 aa3.96□□□□□ -1.78
DEPDC1-203ENST00000488146 ARFGEF1Q9Y6D6 1849 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms