RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
HDLBP-242ENST00000488013 AEBP1Q8IUX7 1158 aa14.53□□□□□ -0.08
HDLBP-242ENST00000488013 APAF1O14727 1248 aa14.52□□□□□ -0.09
HDLBP-242ENST00000488013 HTATSF1O43719 755 aaKnown RBP14.52□□□□□ -0.09
HDLBP-242ENST00000488013 IL2RBP14784 551 aa14.52□□□□□ -0.09
HDLBP-242ENST00000488013 CALD1Q05682 793 aaKnown RBP14.52□□□□□ -0.09
HDLBP-242ENST00000488013 ZNF772Q68DY9 489 aaPredicted RBP14.52□□□□□ -0.09
HDLBP-242ENST00000488013 CCDC146Q8IYE0 955 aa14.52□□□□□ -0.09
HDLBP-242ENST00000488013 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
HDLBP-242ENST00000488013 LMO7Q8WWI1 1683 aa14.52□□□□□ -0.09
HDLBP-242ENST00000488013 NFE2L2Q16236 605 aa14.51□□□□□ -0.09
HDLBP-242ENST00000488013 BARGINQ6ZT62 677 aa14.51□□□□□ -0.09
HDLBP-242ENST00000488013 TRPC5Q9UL62 973 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-242ENST00000488013 ABCA3Q99758 1704 aa14.51□□□□□ -0.09
HDLBP-242ENST00000488013 LTN1O94822 1766 aa14.5□□□□□ -0.09
HDLBP-242ENST00000488013 COL18A1P39060 1754 aa14.5□□□□□ -0.09
HDLBP-242ENST00000488013 SPATA31A1Q5TZJ5 1347 aa14.5□□□□□ -0.09
HDLBP-242ENST00000488013 SPATA31A5Q5VU36 1347 aa14.5□□□□□ -0.09
HDLBP-242ENST00000488013 ZBED9Q6R2W3 1325 aa14.5□□□□□ -0.09
HDLBP-242ENST00000488013 SPATA31A7Q8IWB4 1347 aa14.5□□□□□ -0.09
HDLBP-242ENST00000488013 TMPOP42166 694 aaKnown RBP14.5□□□□□ -0.09
HDLBP-242ENST00000488013 USHBP1Q8N6Y0 703 aa14.5□□□□□ -0.09
HDLBP-242ENST00000488013 CCDC9Q9Y3X0 531 aaKnown RBP14.5□□□□□ -0.09
HDLBP-242ENST00000488013 LRP6O75581 1613 aa14.5□□□□□ -0.09
HDLBP-242ENST00000488013 AFF2P51816 1311 aa14.49□□□□□ -0.09
HDLBP-242ENST00000488013 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
HDLBP-242ENST00000488013 RIPK4P57078 832 aa14.49□□□□□ -0.09
HDLBP-242ENST00000488013 PDE3BQ13370 1112 aa14.49□□□□□ -0.09
HDLBP-242ENST00000488013 BCL9LQ86UU0 1499 aa14.49□□□□□ -0.09
HDLBP-242ENST00000488013 C1orf141Q5JVX7 400 aa14.48□□□□□ -0.09
HDLBP-242ENST00000488013 RTF1Q92541 710 aaKnown RBP14.48□□□□□ -0.09
HDLBP-242ENST00000488013 PHACTR3Q96KR7 559 aa14.48□□□□□ -0.09
HDLBP-242ENST00000488013 WDR63Q8IWG1 891 aa14.47□□□□□ -0.09
HDLBP-242ENST00000488013 ZCRB1Q8TBF4 217 aaKnown RBP14.47□□□□□ -0.09
HDLBP-242ENST00000488013 YTHDC1Q96MU7 727 aaKnown RBP14.47□□□□□ -0.09
HDLBP-242ENST00000488013 USP35Q9P2H5 1018 aa14.47□□□□□ -0.09
HDLBP-242ENST00000488013 FAM208AQ9UK61 1670 aaKnown RBP14.46□□□□□ -0.09
HDLBP-242ENST00000488013 GNAT3A8MTJ3 354 aa14.46□□□□□ -0.09
HDLBP-242ENST00000488013 MTHFSDQ2M296 383 aaKnown RBP14.46□□□□□ -0.09
HDLBP-242ENST00000488013 AKAP4Q5JQC9 854 aa14.46□□□□□ -0.09
HDLBP-242ENST00000488013 GJD4Q96KN9 370 aaPredicted RBP14.46□□□□□ -0.09
HDLBP-242ENST00000488013 RGPD1P0DJD0 1748 aa14.46□□□□□ -0.1
HDLBP-242ENST00000488013 PCDH11XQ9BZA7 1347 aa14.45□□□□□ -0.1
HDLBP-242ENST00000488013 PCDH11YQ9BZA8 1340 aa14.45□□□□□ -0.1
HDLBP-242ENST00000488013 OVOS2A0A0G2JMS6 1433 aa14.45□□□□□ -0.1
HDLBP-242ENST00000488013 EXOC5O00471 708 aa14.45□□□□□ -0.1
HDLBP-242ENST00000488013 ZNF530Q6P9A1 599 aaPredicted RBP14.45□□□□□ -0.1
HDLBP-242ENST00000488013 WWC1Q8IX03 1113 aa14.45□□□□□ -0.1
HDLBP-242ENST00000488013 IFNL2Q8IZJ0 200 aa14.45□□□□□ -0.1
HDLBP-242ENST00000488013 NWD2Q9ULI1 1742 aa14.44□□□□□ -0.1
HDLBP-242ENST00000488013 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
HDLBP-242ENST00000488013 QTRT2Q9H974 415 aaKnown RBP14.44□□□□□ -0.1
HDLBP-242ENST00000488013 IL16Q14005 1332 aa14.43□□□□□ -0.1
HDLBP-242ENST00000488013 GOLGA2Q08379 1002 aa14.43□□□□□ -0.1
HDLBP-242ENST00000488013 RRP7AQ9Y3A4 280 aaKnown RBP14.43□□□□□ -0.1
HDLBP-242ENST00000488013 MAP3K5Q99683 1374 aa14.43□□□□□ -0.1
HDLBP-242ENST00000488013 ATRNO75882 1429 aa14.42□□□□□ -0.1
HDLBP-242ENST00000488013 ONECUT3O60422 494 aaPredicted RBP14.42□□□□□ -0.1
HDLBP-242ENST00000488013 DDB1Q16531 1140 aa14.42□□□□□ -0.1
HDLBP-242ENST00000488013 DCAF5Q96JK2 942 aa14.42□□□□□ -0.1
HDLBP-242ENST00000488013 BABAM1Q9NWV8 329 aa14.42□□□□□ -0.1
HDLBP-242ENST00000488013 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
HDLBP-242ENST00000488013 DISP2A7MBM2 1401 aa14.41□□□□□ -0.1
HDLBP-242ENST00000488013 E9PSI1 815 aa14.41□□□□□ -0.1
HDLBP-242ENST00000488013 CENPBP07199 599 aaPredicted RBP14.41□□□□□ -0.1
HDLBP-242ENST00000488013 PHKG2P15735 406 aa14.41□□□□□ -0.1
HDLBP-242ENST00000488013 RBM6P78332 1123 aaKnown RBP14.41□□□□□ -0.1
HDLBP-242ENST00000488013 MYH16Q9H6N6 1097 aa14.41□□□□□ -0.1
HDLBP-242ENST00000488013 TRIM35Q9UPQ4 493 aa14.41□□□□□ -0.1
HDLBP-242ENST00000488013 SALL2Q9Y467 1007 aaPredicted RBP14.41□□□□□ -0.1
HDLBP-242ENST00000488013 MEGF6O75095 1541 aa14.41□□□□□ -0.1
HDLBP-242ENST00000488013 NKX1-1Q15270 411 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-242ENST00000488013 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-242ENST00000488013 GNAI1P63096 354 aa14.39□□□□□ -0.11
HDLBP-242ENST00000488013 FAM98CQ17RN3 349 aaKnown RBP14.39□□□□□ -0.11
HDLBP-242ENST00000488013 IFT57Q9NWB7 429 aa14.39□□□□□ -0.11
HDLBP-242ENST00000488013 PLCH1Q4KWH8 1693 aa14.39□□□□□ -0.11
HDLBP-242ENST00000488013 ATF5Q9Y2D1 282 aaPredicted RBP14.38□□□□□ -0.11
HDLBP-242ENST00000488013 A0A0G2JS52 829 aa14.37□□□□□ -0.11
HDLBP-242ENST00000488013 ERVV-2B6SEH9 535 aa14.37□□□□□ -0.11
HDLBP-242ENST00000488013 CYP27B1O15528 508 aa14.37□□□□□ -0.11
HDLBP-242ENST00000488013 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
HDLBP-242ENST00000488013 RXRBP28702 533 aa14.37□□□□□ -0.11
HDLBP-242ENST00000488013 MYT1Q01538 1121 aa14.37□□□□□ -0.11
HDLBP-242ENST00000488013 TEFQ10587 303 aa14.37□□□□□ -0.11
HDLBP-242ENST00000488013 DDX54Q8TDD1 881 aaKnown RBP14.37□□□□□ -0.11
HDLBP-242ENST00000488013 CFAP44Q96MT7 982 aa14.37□□□□□ -0.11
HDLBP-242ENST00000488013 TNS2Q63HR2 1409 aa14.37□□□□□ -0.11
HDLBP-242ENST00000488013 CEMIPQ8WUJ3 1361 aa14.36□□□□□ -0.11
HDLBP-242ENST00000488013 NRAPQ86VF7 1730 aa14.36□□□□□ -0.11
HDLBP-242ENST00000488013 RNMTO43148 476 aaKnown RBP14.36□□□□□ -0.11
HDLBP-242ENST00000488013 TAF7Q15545 349 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-242ENST00000488013 IL17REQ8NFR9 667 aa14.36□□□□□ -0.11
HDLBP-242ENST00000488013 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.35□□□□□ -0.11
HDLBP-242ENST00000488013 SLFN5Q08AF3 891 aa14.35□□□□□ -0.11
HDLBP-242ENST00000488013 MPRIPQ6WCQ1 1025 aa14.35□□□□□ -0.11
HDLBP-242ENST00000488013 MCM10Q7L590 875 aa14.35□□□□□ -0.11
HDLBP-242ENST00000488013 CHMP4AQ9BY43 222 aa14.35□□□□□ -0.11
HDLBP-242ENST00000488013 CT47B1P0C2W7 299 aaPredicted RBP14.34□□□□□ -0.11
HDLBP-242ENST00000488013 SEPT12Q8IYM1 358 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms