RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-222	ENST00000487647	CAMTA1	Q9Y6Y1	1673 aa		18.96	■□□□□ 0.63
FGFR1-222	ENST00000487647	MCM10	Q7L590	875 aa		18.96	■□□□□ 0.63
FGFR1-222	ENST00000487647	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.95	■□□□□ 0.62
FGFR1-222	ENST00000487647	MS4A1	P11836	297 aa		18.95	■□□□□ 0.62
FGFR1-222	ENST00000487647	BRPF1	P55201	1214 aa	Predicted RBP	18.95	■□□□□ 0.62
FGFR1-222	ENST00000487647	EXOC6	Q8TAG9	804 aa		18.95	■□□□□ 0.62
FGFR1-222	ENST00000487647	PRDM11	Q9NQV5	511 aa		18.95	■□□□□ 0.62
FGFR1-222	ENST00000487647	COL18A1	P39060	1754 aa		18.95	■□□□□ 0.62
FGFR1-222	ENST00000487647	TOM1	O60784	492 aa		18.94	■□□□□ 0.62
FGFR1-222	ENST00000487647	CANX	P27824	592 aa	Known RBP	18.94	■□□□□ 0.62
FGFR1-222	ENST00000487647	LMO7	Q8WWI1	1683 aa		18.93	■□□□□ 0.62
FGFR1-222	ENST00000487647	VAMP4	O75379	141 aa		18.92	■□□□□ 0.62
FGFR1-222	ENST00000487647	CSB-PGBD3	P0DP91	1061 aa		18.92	■□□□□ 0.62
FGFR1-222	ENST00000487647	AKAP4	Q5JQC9	854 aa		18.92	■□□□□ 0.62
FGFR1-222	ENST00000487647	CRBN	Q96SW2	442 aa		18.92	■□□□□ 0.62
FGFR1-222	ENST00000487647	NLRP2	Q9NX02	1062 aa		18.92	■□□□□ 0.62
FGFR1-222	ENST00000487647	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
FGFR1-222	ENST00000487647	CHRNA2	Q15822	529 aa		18.92	■□□□□ 0.62
FGFR1-222	ENST00000487647	CCDC136	Q96JN2	1154 aa		18.92	■□□□□ 0.62
FGFR1-222	ENST00000487647	SMC4	Q9NTJ3	1288 aa		18.92	■□□□□ 0.62
FGFR1-222	ENST00000487647	ROBO1	Q9Y6N7	1651 aa		18.91	■□□□□ 0.62
FGFR1-222	ENST00000487647	AAMP	Q13685	434 aa		18.91	■□□□□ 0.62
FGFR1-222	ENST00000487647	C20orf194	Q5TEA3	1177 aa		18.91	■□□□□ 0.62
FGFR1-222	ENST00000487647	ZKSCAN2	Q63HK3	967 aa		18.91	■□□□□ 0.62
FGFR1-222	ENST00000487647	SSH1	Q8WYL5	1049 aa		18.91	■□□□□ 0.62
FGFR1-222	ENST00000487647	RAPGEF4	Q8WZA2	1011 aa		18.91	■□□□□ 0.62
FGFR1-222	ENST00000487647	KIF16B	Q96L93	1317 aa		18.91	■□□□□ 0.62
FGFR1-222	ENST00000487647	FAM208A	Q9UK61	1670 aa	Known RBP	18.9	■□□□□ 0.62
FGFR1-222	ENST00000487647	IPO8	O15397	1037 aa	Known RBP	18.9	■□□□□ 0.62
FGFR1-222	ENST00000487647	TWISTNB	Q3B726	338 aa	Predicted RBP	18.9	■□□□□ 0.62
FGFR1-222	ENST00000487647	CEMIP	Q8WUJ3	1361 aa		18.89	■□□□□ 0.62
FGFR1-222	ENST00000487647	B4GALNT3	Q6L9W6	998 aa		18.89	■□□□□ 0.62
FGFR1-222	ENST00000487647	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.89	■□□□□ 0.62
FGFR1-222	ENST00000487647	IL17RE	Q8NFR9	667 aa		18.89	■□□□□ 0.62
FGFR1-222	ENST00000487647	FRAT1	Q92837	279 aa	Predicted RBP	18.89	■□□□□ 0.62
FGFR1-222	ENST00000487647	WDR17	Q8IZU2	1322 aa		18.89	■□□□□ 0.61
FGFR1-222	ENST00000487647	TAT	P17735	454 aa	Predicted RBP	18.89	■□□□□ 0.61
FGFR1-222	ENST00000487647	TAF7	Q15545	349 aa	Predicted RBP	18.89	■□□□□ 0.61
FGFR1-222	ENST00000487647	C1orf141	Q5JVX7	400 aa		18.89	■□□□□ 0.61
FGFR1-222	ENST00000487647	SOS1	Q07889	1333 aa	Predicted RBP	18.88	■□□□□ 0.61
FGFR1-222	ENST00000487647	TSPYL4	Q9UJ04	414 aa		18.88	■□□□□ 0.61
FGFR1-222	ENST00000487647	OVOS2	A0A0G2JMS6	1433 aa		18.88	■□□□□ 0.61
FGFR1-222	ENST00000487647	C8orf58	Q8NAV2	365 aa		18.87	■□□□□ 0.61
FGFR1-222	ENST00000487647	BCL2L13	Q9BXK5	485 aa		18.87	■□□□□ 0.61
FGFR1-222	ENST00000487647	SPG7	Q9UQ90	795 aa		18.87	■□□□□ 0.61
FGFR1-222	ENST00000487647	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.86	■□□□□ 0.61
FGFR1-222	ENST00000487647	TSPYL6	Q8N831	410 aa		18.86	■□□□□ 0.61
FGFR1-222	ENST00000487647	ARHGAP45	Q92619	1136 aa		18.86	■□□□□ 0.61
FGFR1-222	ENST00000487647	RGPD2	P0DJD1	1756 aa		18.86	■□□□□ 0.61
FGFR1-222	ENST00000487647	LRRC37A3	O60309	1634 aa		18.86	■□□□□ 0.61
FGFR1-222	ENST00000487647	RGPD5	Q99666	1765 aa		18.85	■□□□□ 0.61
FGFR1-222	ENST00000487647	ABCA3	Q99758	1704 aa		18.85	■□□□□ 0.61
FGFR1-222	ENST00000487647	ATF7IP	Q6VMQ6	1270 aa		18.85	■□□□□ 0.61
FGFR1-222	ENST00000487647	COL5A2	P05997	1499 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-222	ENST00000487647	CARD10	Q9BWT7	1032 aa		18.84	■□□□□ 0.61
FGFR1-222	ENST00000487647	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-222	ENST00000487647	TOM1L2	Q6ZVM7	507 aa		18.83	■□□□□ 0.61
FGFR1-222	ENST00000487647	DZIP1L	Q8IYY4	767 aa	Known RBP	18.83	■□□□□ 0.61
FGFR1-222	ENST00000487647	MRPL50	Q8N5N7	158 aa	Known RBP	18.83	■□□□□ 0.61
FGFR1-222	ENST00000487647	NOB1	Q9ULX3	412 aa	Known RBP	18.83	■□□□□ 0.61
FGFR1-222	ENST00000487647	RNMT	O43148	476 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-222	ENST00000487647	EVA1C	P58658	441 aa		18.82	■□□□□ 0.6
FGFR1-222	ENST00000487647	FTSJ3	Q8IY81	847 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-222	ENST00000487647	CHMP4A	Q9BY43	222 aa		18.82	■□□□□ 0.6
FGFR1-222	ENST00000487647	ELL2	O00472	640 aa	Predicted RBP	18.82	■□□□□ 0.6
FGFR1-222	ENST00000487647	TEF	Q10587	303 aa		18.82	■□□□□ 0.6
FGFR1-222	ENST00000487647	PANK1	Q8TE04	598 aa		18.82	■□□□□ 0.6
FGFR1-222	ENST00000487647	HSP90AB1	P08238	724 aa	Known RBP	18.81	■□□□□ 0.6
FGFR1-222	ENST00000487647	TRIM27	P14373	513 aa		18.81	■□□□□ 0.6
FGFR1-222	ENST00000487647	IFNL2	Q8IZJ0	200 aa		18.81	■□□□□ 0.6
FGFR1-222	ENST00000487647	MIS18A	Q9NYP9	233 aa		18.81	■□□□□ 0.6
FGFR1-222	ENST00000487647	LGR6	Q9HBX8	967 aa		18.8	■□□□□ 0.6
FGFR1-222	ENST00000487647	MEGF6	O75095	1541 aa		18.79	■□□□□ 0.6
FGFR1-222	ENST00000487647	MVP	Q14764	893 aa	Known RBP	18.79	■□□□□ 0.6
FGFR1-222	ENST00000487647	MPRIP	Q6WCQ1	1025 aa		18.79	■□□□□ 0.6
FGFR1-222	ENST00000487647	COG6	Q9Y2V7	657 aa		18.79	■□□□□ 0.6
FGFR1-222	ENST00000487647	UBAP1L	F5GYI3	381 aa		18.78	■□□□□ 0.6
FGFR1-222	ENST00000487647	HOXB7	P09629	217 aa		18.78	■□□□□ 0.6
FGFR1-222	ENST00000487647	PHKG2	P15735	406 aa		18.78	■□□□□ 0.6
FGFR1-222	ENST00000487647	API5	Q9BZZ5	524 aa	Known RBP	18.78	■□□□□ 0.6
FGFR1-222	ENST00000487647	RLBP1	P12271	317 aa		18.78	■□□□□ 0.6
FGFR1-222	ENST00000487647	CHMP4B	Q9H444	224 aa	Known RBP	18.78	■□□□□ 0.6
FGFR1-222	ENST00000487647	COL16A1	Q07092	1604 aa	Predicted RBP	18.77	■□□□□ 0.6
FGFR1-222	ENST00000487647	CLUAP1	Q96AJ1	413 aa		18.77	■□□□□ 0.6
FGFR1-222	ENST00000487647	DDX19B	Q9UMR2	479 aa		18.77	■□□□□ 0.6
FGFR1-222	ENST00000487647	PHLPP1	O60346	1717 aa		18.76	■□□□□ 0.59
FGFR1-222	ENST00000487647	BTBD11	A6QL63	1104 aa		18.76	■□□□□ 0.59
FGFR1-222	ENST00000487647	IL2RB	P14784	551 aa		18.76	■□□□□ 0.59
FGFR1-222	ENST00000487647	PIP4K2B	P78356	416 aa		18.76	■□□□□ 0.59
FGFR1-222	ENST00000487647	DCAF5	Q96JK2	942 aa		18.76	■□□□□ 0.59
FGFR1-222	ENST00000487647	BTG4	Q9NY30	223 aa		18.76	■□□□□ 0.59
FGFR1-222	ENST00000487647	COL14A1	Q05707	1796 aa	Known RBP	18.76	■□□□□ 0.59
FGFR1-222	ENST00000487647	KRT24	Q2M2I5	525 aa		18.75	■□□□□ 0.59
FGFR1-222	ENST00000487647	LARP1	Q6PKG0	1096 aa	Known RBP	18.75	■□□□□ 0.59
FGFR1-222	ENST00000487647	STRN4	Q9NRL3	753 aa		18.75	■□□□□ 0.59
FGFR1-222	ENST00000487647	ADAMTS7	Q9UKP4	1686 aa		18.75	■□□□□ 0.59
FGFR1-222	ENST00000487647	PTPRC	P08575	1304 aa		18.75	■□□□□ 0.59
FGFR1-222	ENST00000487647	CCDC30	Q5VVM6	783 aa		18.74	■□□□□ 0.59
FGFR1-222	ENST00000487647	ZCRB1	Q8TBF4	217 aa	Known RBP	18.74	■□□□□ 0.59
FGFR1-222	ENST00000487647	PCDH11X	Q9BZA7	1347 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms