RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 KNSTRNQ9Y448 316 aa15.71■□□□□ 0.11
SPEN-205ENST00000487496 RGPD3A6NKT7 1758 aaPredicted RBP15.71■□□□□ 0.11
SPEN-205ENST00000487496 RGPD4Q7Z3J3 1758 aa15.71■□□□□ 0.11
SPEN-205ENST00000487496 NSD2O96028 1365 aa15.71■□□□□ 0.11
SPEN-205ENST00000487496 NHSQ6T4R5 1651 aa15.7■□□□□ 0.1
SPEN-205ENST00000487496 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
SPEN-205ENST00000487496 ANKRD26Q9UPS8 1709 aa15.69■□□□□ 0.1
SPEN-205ENST00000487496 MORC1Q86VD1 984 aa15.69■□□□□ 0.1
SPEN-205ENST00000487496 MAP2P11137 1827 aaKnown RBP15.68■□□□□ 0.1
SPEN-205ENST00000487496 EYA1Q99502 592 aa15.68■□□□□ 0.1
SPEN-205ENST00000487496 ANO8Q9HCE9 1232 aaPredicted RBP15.68■□□□□ 0.1
SPEN-205ENST00000487496 PRIM1P49642 420 aaKnown RBP15.67■□□□□ 0.1
SPEN-205ENST00000487496 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
SPEN-205ENST00000487496 AMER1Q5JTC6 1135 aaPredicted RBP15.67■□□□□ 0.1
SPEN-205ENST00000487496 SYTL4Q96C24 671 aaPredicted RBP15.67■□□□□ 0.1
SPEN-205ENST00000487496 NCAPD2Q15021 1401 aa15.67■□□□□ 0.1
SPEN-205ENST00000487496 LRP5O75197 1615 aa15.66■□□□□ 0.1
SPEN-205ENST00000487496 PER1O15534 1290 aaPredicted RBP15.66■□□□□ 0.1
SPEN-205ENST00000487496 SHANK3Q9BYB0 1731 aa15.65■□□□□ 0.1
SPEN-205ENST00000487496 KAT6BQ8WYB5 2073 aa15.65■□□□□ 0.1
SPEN-205ENST00000487496 PCDH11XQ9BZA7 1347 aa15.65■□□□□ 0.1
SPEN-205ENST00000487496 PCDH11YQ9BZA8 1340 aa15.65■□□□□ 0.1
SPEN-205ENST00000487496 BTAF1O14981 1849 aa15.64■□□□□ 0.09
SPEN-205ENST00000487496 CYP27B1O15528 508 aa15.64■□□□□ 0.09
SPEN-205ENST00000487496 STK32BQ9NY57 414 aa15.64■□□□□ 0.09
SPEN-205ENST00000487496 SLC15A2Q16348 729 aa15.63■□□□□ 0.09
SPEN-205ENST00000487496 LRRC4BQ9NT99 713 aa15.62■□□□□ 0.09
SPEN-205ENST00000487496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.62■□□□□ 0.09
SPEN-205ENST00000487496 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
SPEN-205ENST00000487496 DOT1LQ8TEK3 1739 aa15.61■□□□□ 0.09
SPEN-205ENST00000487496 SLC27A3Q5K4L6 730 aa15.61■□□□□ 0.09
SPEN-205ENST00000487496 PDGFDQ9GZP0 370 aaPredicted RBP15.61■□□□□ 0.09
SPEN-205ENST00000487496 IGSF1Q8N6C5 1336 aa15.61■□□□□ 0.09
SPEN-205ENST00000487496 SPON1Q9HCB6 807 aa15.6■□□□□ 0.09
SPEN-205ENST00000487496 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
SPEN-205ENST00000487496 CC2D1BQ5T0F9 858 aaKnown RBP15.59■□□□□ 0.09
SPEN-205ENST00000487496 PKD1L3Q7Z443 1732 aa15.59■□□□□ 0.09
SPEN-205ENST00000487496 MPRIPQ6WCQ1 1025 aa15.58■□□□□ 0.08
SPEN-205ENST00000487496 IL13P35225 146 aa15.57■□□□□ 0.08
SPEN-205ENST00000487496 MTHFSP49914 203 aa15.57■□□□□ 0.08
SPEN-205ENST00000487496 KCNQ4P56696 695 aa15.57■□□□□ 0.08
SPEN-205ENST00000487496 ZNF827Q17R98 1081 aa15.57■□□□□ 0.08
SPEN-205ENST00000487496 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
SPEN-205ENST00000487496 PAPPAQ13219 1627 aa15.57■□□□□ 0.08
SPEN-205ENST00000487496 ZBTB7AO95365 584 aa15.56■□□□□ 0.08
SPEN-205ENST00000487496 PHKG2P15735 406 aa15.56■□□□□ 0.08
SPEN-205ENST00000487496 AEBP1Q8IUX7 1158 aa15.56■□□□□ 0.08
SPEN-205ENST00000487496 AKT1S1Q96B36 256 aa15.56■□□□□ 0.08
SPEN-205ENST00000487496 PLEKHG2Q9H7P9 1386 aa15.56■□□□□ 0.08
SPEN-205ENST00000487496 NPC1L1Q9UHC9 1359 aa15.56■□□□□ 0.08
SPEN-205ENST00000487496 CASZ1Q86V15 1759 aa15.55■□□□□ 0.08
SPEN-205ENST00000487496 CCNL1Q9UK58 526 aaPredicted RBP15.55■□□□□ 0.08
SPEN-205ENST00000487496 CNGB1Q14028 1251 aaPredicted RBP15.54■□□□□ 0.08
SPEN-205ENST00000487496 PLEKHO1Q53GL0 409 aaPredicted RBP15.54■□□□□ 0.08
SPEN-205ENST00000487496 SULT6B1Q6IMI4 303 aa15.54■□□□□ 0.08
SPEN-205ENST00000487496 PIGBQ92521 554 aa15.54■□□□□ 0.08
SPEN-205ENST00000487496 ATF5Q9Y2D1 282 aaPredicted RBP15.53■□□□□ 0.08
SPEN-205ENST00000487496 LY75O60449 1722 aa15.53■□□□□ 0.08
SPEN-205ENST00000487496 TOGARAM1Q9Y4F4 1720 aa15.53■□□□□ 0.08
SPEN-205ENST00000487496 KDRP35968 1356 aa15.52■□□□□ 0.08
SPEN-205ENST00000487496 PALLDQ8WX93 1383 aa15.52■□□□□ 0.08
SPEN-205ENST00000487496 PTGER2P43116 358 aa15.52■□□□□ 0.08
SPEN-205ENST00000487496 AMOTQ4VCS5 1084 aa15.52■□□□□ 0.08
SPEN-205ENST00000487496 SMARCC1Q92922 1105 aaPredicted RBP15.52■□□□□ 0.08
SPEN-205ENST00000487496 MTFR1LQ9H019 292 aa15.52■□□□□ 0.08
SPEN-205ENST00000487496 PPP1R1BQ9UD71 204 aaPredicted RBP15.52■□□□□ 0.08
SPEN-205ENST00000487496 TMOD3Q9NYL9 352 aa15.51■□□□□ 0.07
SPEN-205ENST00000487496 TFCP2L1Q9NZI6 479 aa15.51■□□□□ 0.07
SPEN-205ENST00000487496 PNPLA7Q6ZV29 1317 aa15.5■□□□□ 0.07
SPEN-205ENST00000487496 DIAPH1O60610 1272 aaKnown RBP15.5■□□□□ 0.07
SPEN-205ENST00000487496 HSP90AB1P08238 724 aaKnown RBP15.5■□□□□ 0.07
SPEN-205ENST00000487496 ZNF530Q6P9A1 599 aaPredicted RBP15.5■□□□□ 0.07
SPEN-205ENST00000487496 ITGB4P16144 1822 aa15.5■□□□□ 0.07
SPEN-205ENST00000487496 DCAF5Q96JK2 942 aa15.49■□□□□ 0.07
SPEN-205ENST00000487496 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
SPEN-205ENST00000487496 SLC16A10Q8TF71 515 aa15.48■□□□□ 0.07
SPEN-205ENST00000487496 SGIP1Q9BQI5 828 aa15.48■□□□□ 0.07
SPEN-205ENST00000487496 ASAP1Q9ULH1 1129 aa15.48■□□□□ 0.07
SPEN-205ENST00000487496 HMOX1P09601 288 aa15.47■□□□□ 0.07
SPEN-205ENST00000487496 HMGB2P26583 209 aaKnown RBP15.47■□□□□ 0.07
SPEN-205ENST00000487496 C1orf141Q5JVX7 400 aa15.47■□□□□ 0.07
SPEN-205ENST00000487496 ATG3Q9NT62 314 aa15.47■□□□□ 0.07
SPEN-205ENST00000487496 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.07
SPEN-205ENST00000487496 LOC102724428A0A0B4J2F2 783 aa15.46■□□□□ 0.07
SPEN-205ENST00000487496 SIK1P57059 783 aa15.46■□□□□ 0.07
SPEN-205ENST00000487496 COL23A1Q86Y22 540 aaPredicted RBP15.45■□□□□ 0.06
SPEN-205ENST00000487496 COL3A1P02461 1466 aaPredicted RBP15.45■□□□□ 0.06
SPEN-205ENST00000487496 QSER1Q2KHR3 1735 aa15.44■□□□□ 0.06
SPEN-205ENST00000487496 CABP4P57796 275 aa15.44■□□□□ 0.06
SPEN-205ENST00000487496 ATP6V1AP38606 617 aa15.43■□□□□ 0.06
SPEN-205ENST00000487496 ITPK1Q13572 414 aa15.43■□□□□ 0.06
SPEN-205ENST00000487496 ARXQ96QS3 562 aa15.43■□□□□ 0.06
SPEN-205ENST00000487496 C5P01031 1676 aa15.43■□□□□ 0.06
SPEN-205ENST00000487496 U2SURPO15042 1029 aaKnown RBP15.42■□□□□ 0.06
SPEN-205ENST00000487496 MSH5O43196 834 aa15.42■□□□□ 0.06
SPEN-205ENST00000487496 PPP2R1AP30153 589 aa15.42■□□□□ 0.06
SPEN-205ENST00000487496 AKAP4Q5JQC9 854 aa15.42■□□□□ 0.06
SPEN-205ENST00000487496 NFATC2IPQ8NCF5 419 aa15.42■□□□□ 0.06
SPEN-205ENST00000487496 LINC00116Q8NCU8 138 aa15.42■□□□□ 0.06
SPEN-205ENST00000487496 AK7Q96M32 723 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms