RNA–Protein interactions for RNA: ENST00000487309.3

RN7SL397P-201, Transcript of RNA, 7SL, cytoplasmic 397, pseudogene, humanhuman

BASIC

Gene RN7SL397P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL397P-201ENST00000487309 NBPF4Q96M43 638 aa13.37□□□□□ -0.27
RN7SL397P-201ENST00000487309 QSER1Q2KHR3 1735 aa13.36□□□□□ -0.27
RN7SL397P-201ENST00000487309 NSD2O96028 1365 aa13.36□□□□□ -0.27
RN7SL397P-201ENST00000487309 KCNQ4P56696 695 aa13.36□□□□□ -0.27
RN7SL397P-201ENST00000487309 NSD3Q9BZ95 1437 aa13.36□□□□□ -0.27
RN7SL397P-201ENST00000487309 ANKRD26Q9UPS8 1709 aa13.36□□□□□ -0.27
RN7SL397P-201ENST00000487309 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
RN7SL397P-201ENST00000487309 HSP90AB2PQ58FF8 381 aa13.35□□□□□ -0.27
RN7SL397P-201ENST00000487309 PCGF6Q9BYE7 350 aa13.35□□□□□ -0.27
RN7SL397P-201ENST00000487309 TOGARAM1Q9Y4F4 1720 aa13.35□□□□□ -0.27
RN7SL397P-201ENST00000487309 ITGB4P16144 1822 aa13.34□□□□□ -0.27
RN7SL397P-201ENST00000487309 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
RN7SL397P-201ENST00000487309 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
RN7SL397P-201ENST00000487309 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
RN7SL397P-201ENST00000487309 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
RN7SL397P-201ENST00000487309 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
RN7SL397P-201ENST00000487309 INSRP06213 1382 aa13.32□□□□□ -0.28
RN7SL397P-201ENST00000487309 COL24A1Q17RW2 1714 aa13.32□□□□□ -0.28
RN7SL397P-201ENST00000487309 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
RN7SL397P-201ENST00000487309 TAF1LQ8IZX4 1826 aa13.32□□□□□ -0.28
RN7SL397P-201ENST00000487309 FLT4P35916 1363 aa13.32□□□□□ -0.28
RN7SL397P-201ENST00000487309 CHD4Q14839 1912 aa13.31□□□□□ -0.28
RN7SL397P-201ENST00000487309 CDCA8Q53HL2 280 aa13.31□□□□□ -0.28
RN7SL397P-201ENST00000487309 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
RN7SL397P-201ENST00000487309 FHDC1Q9C0D6 1143 aaPredicted RBP13.31□□□□□ -0.28
RN7SL397P-201ENST00000487309 MTFR1LQ9H019 292 aa13.31□□□□□ -0.28
RN7SL397P-201ENST00000487309 SMG6Q86US8 1419 aaKnown RBP13.3□□□□□ -0.28
RN7SL397P-201ENST00000487309 CEP350Q5VT06 3117 aa13.3□□□□□ -0.28
RN7SL397P-201ENST00000487309 C5P01031 1676 aa13.29□□□□□ -0.28
RN7SL397P-201ENST00000487309 YY1P25490 414 aa13.29□□□□□ -0.28
RN7SL397P-201ENST00000487309 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
RN7SL397P-201ENST00000487309 CYP27B1O15528 508 aa13.28□□□□□ -0.28
RN7SL397P-201ENST00000487309 SLC27A3Q5K4L6 730 aa13.28□□□□□ -0.28
RN7SL397P-201ENST00000487309 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
RN7SL397P-201ENST00000487309 SYT17Q9BSW7 474 aa13.28□□□□□ -0.28
RN7SL397P-201ENST00000487309 POLR3GLQ9BT43 218 aa13.28□□□□□ -0.28
RN7SL397P-201ENST00000487309 NCAPD2Q15021 1401 aa13.28□□□□□ -0.28
RN7SL397P-201ENST00000487309 PPM1GO15355 546 aaPredicted RBP13.27□□□□□ -0.29
RN7SL397P-201ENST00000487309 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.29
RN7SL397P-201ENST00000487309 TIMELESSQ9UNS1 1208 aa13.27□□□□□ -0.29
RN7SL397P-201ENST00000487309 CLSPNQ9HAW4 1339 aa13.27□□□□□ -0.29
RN7SL397P-201ENST00000487309 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
RN7SL397P-201ENST00000487309 CGNL1Q0VF96 1302 aa13.26□□□□□ -0.29
RN7SL397P-201ENST00000487309 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
RN7SL397P-201ENST00000487309 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
RN7SL397P-201ENST00000487309 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
RN7SL397P-201ENST00000487309 ARXQ96QS3 562 aa13.25□□□□□ -0.29
RN7SL397P-201ENST00000487309 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
RN7SL397P-201ENST00000487309 CCNL1Q9UK58 526 aaPredicted RBP13.25□□□□□ -0.29
RN7SL397P-201ENST00000487309 TNNT2P45379 298 aaPredicted RBP13.24□□□□□ -0.29
RN7SL397P-201ENST00000487309 POLKQ9UBT6 870 aa13.24□□□□□ -0.29
RN7SL397P-201ENST00000487309 UBR3Q6ZT12 1888 aa13.24□□□□□ -0.29
RN7SL397P-201ENST00000487309 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
RN7SL397P-201ENST00000487309 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
RN7SL397P-201ENST00000487309 EYA1Q99502 592 aa13.23□□□□□ -0.29
RN7SL397P-201ENST00000487309 C4BP0C0L5 1744 aa13.22□□□□□ -0.29
RN7SL397P-201ENST00000487309 PALLDQ8WX93 1383 aa13.22□□□□□ -0.29
RN7SL397P-201ENST00000487309 MAP3K5Q99683 1374 aa13.22□□□□□ -0.29
RN7SL397P-201ENST00000487309 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
RN7SL397P-201ENST00000487309 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
RN7SL397P-201ENST00000487309 SMIM5Q71RC9 77 aa13.21□□□□□ -0.29
RN7SL397P-201ENST00000487309 COL23A1Q86Y22 540 aaPredicted RBP13.21□□□□□ -0.29
RN7SL397P-201ENST00000487309 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
RN7SL397P-201ENST00000487309 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.3
RN7SL397P-201ENST00000487309 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
RN7SL397P-201ENST00000487309 MSL1Q68DK7 614 aa13.2□□□□□ -0.3
RN7SL397P-201ENST00000487309 SLC16A10Q8TF71 515 aa13.2□□□□□ -0.3
RN7SL397P-201ENST00000487309 PIGBQ92521 554 aa13.2□□□□□ -0.3
RN7SL397P-201ENST00000487309 PANK3Q9H999 370 aa13.2□□□□□ -0.3
RN7SL397P-201ENST00000487309 NLGN2Q8NFZ4 835 aa13.19□□□□□ -0.3
RN7SL397P-201ENST00000487309 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
RN7SL397P-201ENST00000487309 MSH5O43196 834 aa13.18□□□□□ -0.3
RN7SL397P-201ENST00000487309 POLD1P28340 1107 aa13.18□□□□□ -0.3
RN7SL397P-201ENST00000487309 NKX1-1Q15270 411 aaPredicted RBP13.18□□□□□ -0.3
RN7SL397P-201ENST00000487309 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
RN7SL397P-201ENST00000487309 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
RN7SL397P-201ENST00000487309 PHKG2P15735 406 aa13.16□□□□□ -0.3
RN7SL397P-201ENST00000487309 ZNF784Q8NCA9 323 aaPredicted RBP13.16□□□□□ -0.3
RN7SL397P-201ENST00000487309 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
RN7SL397P-201ENST00000487309 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
RN7SL397P-201ENST00000487309 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
RN7SL397P-201ENST00000487309 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
RN7SL397P-201ENST00000487309 ITPK1Q13572 414 aa13.14□□□□□ -0.31
RN7SL397P-201ENST00000487309 GPR162Q16538 588 aa13.14□□□□□ -0.31
RN7SL397P-201ENST00000487309 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
RN7SL397P-201ENST00000487309 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
RN7SL397P-201ENST00000487309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
RN7SL397P-201ENST00000487309 COL5A3P25940 1745 aaPredicted RBP13.13□□□□□ -0.31
RN7SL397P-201ENST00000487309 LOC102724428A0A0B4J2F2 783 aa13.13□□□□□ -0.31
RN7SL397P-201ENST00000487309 PHF14O94880 888 aa13.13□□□□□ -0.31
RN7SL397P-201ENST00000487309 YBX3P16989 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
RN7SL397P-201ENST00000487309 SIK1P57059 783 aa13.13□□□□□ -0.31
RN7SL397P-201ENST00000487309 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
RN7SL397P-201ENST00000487309 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
RN7SL397P-201ENST00000487309 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
RN7SL397P-201ENST00000487309 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
RN7SL397P-201ENST00000487309 AK7Q96M32 723 aa13.12□□□□□ -0.31
RN7SL397P-201ENST00000487309 ATG3Q9NT62 314 aa13.12□□□□□ -0.31
RN7SL397P-201ENST00000487309 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
RN7SL397P-201ENST00000487309 KDRP35968 1356 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms