RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 HSP90AB2PQ58FF8 381 aa31.03■■■□□ 2.56
SRM-205ENST00000487300 ANO8Q9HCE9 1232 aaPredicted RBP31.03■■■□□ 2.56
SRM-205ENST00000487300 TXNRD1Q16881 649 aa31■■■□□ 2.55
SRM-205ENST00000487300 ACSBG1Q96GR2 724 aa31■■■□□ 2.55
SRM-205ENST00000487300 EMILIN1Q9Y6C2 1016 aa31■■■□□ 2.55
SRM-205ENST00000487300 QSER1Q2KHR3 1735 aa31■■■□□ 2.55
SRM-205ENST00000487300 TOGARAM1Q9Y4F4 1720 aa30.96■■■□□ 2.55
SRM-205ENST00000487300 NSD2O96028 1365 aa30.96■■■□□ 2.55
SRM-205ENST00000487300 USHBP1Q8N6Y0 703 aa30.95■■■□□ 2.55
SRM-205ENST00000487300 ZCRB1Q8TBF4 217 aaKnown RBP30.95■■■□□ 2.55
SRM-205ENST00000487300 DDX54Q8TDD1 881 aaKnown RBP30.95■■■□□ 2.55
SRM-205ENST00000487300 WASHC2AQ641Q2 1341 aa30.95■■■□□ 2.54
SRM-205ENST00000487300 POLR3GLQ9BT43 218 aa30.94■■■□□ 2.54
SRM-205ENST00000487300 ITGB4P16144 1822 aa30.94■■■□□ 2.54
SRM-205ENST00000487300 TUBGCP6Q96RT7 1819 aa30.94■■■□□ 2.54
SRM-205ENST00000487300 PANK3Q9H999 370 aa30.91■■■□□ 2.54
SRM-205ENST00000487300 POLKQ9UBT6 870 aa30.91■■■□□ 2.54
SRM-205ENST00000487300 RAPGEF4Q8WZA2 1011 aa30.9■■■□□ 2.54
SRM-205ENST00000487300 SLC15A2Q16348 729 aa30.87■■■□□ 2.53
SRM-205ENST00000487300 TATP17735 454 aaPredicted RBP30.86■■■□□ 2.53
SRM-205ENST00000487300 COL24A1Q17RW2 1714 aa30.86■■■□□ 2.53
SRM-205ENST00000487300 PCDH11XQ9BZA7 1347 aa30.85■■■□□ 2.53
SRM-205ENST00000487300 PCDH11YQ9BZA8 1340 aa30.85■■■□□ 2.53
SRM-205ENST00000487300 PDGFDQ9GZP0 370 aaPredicted RBP30.85■■■□□ 2.53
SRM-205ENST00000487300 SPON1Q9HCB6 807 aa30.85■■■□□ 2.53
SRM-205ENST00000487300 LRRC4BQ9NT99 713 aa30.84■■■□□ 2.53
SRM-205ENST00000487300 STK32BQ9NY57 414 aa30.84■■■□□ 2.53
SRM-205ENST00000487300 TAF1LQ8IZX4 1826 aa30.84■■■□□ 2.53
SRM-205ENST00000487300 PLEKHG2Q9H7P9 1386 aa30.83■■■□□ 2.53
SRM-205ENST00000487300 PRIM1P49642 420 aaKnown RBP30.83■■■□□ 2.53
SRM-205ENST00000487300 KIF7Q2M1P5 1343 aa30.82■■■□□ 2.52
SRM-205ENST00000487300 PPM1GO15355 546 aaPredicted RBP30.82■■■□□ 2.52
SRM-205ENST00000487300 C5P01031 1676 aa30.81■■■□□ 2.52
SRM-205ENST00000487300 SLC27A3Q5K4L6 730 aa30.8■■■□□ 2.52
SRM-205ENST00000487300 EYA1Q99502 592 aa30.8■■■□□ 2.52
SRM-205ENST00000487300 CYP27B1O15528 508 aa30.79■■■□□ 2.52
SRM-205ENST00000487300 EIF4A2Q14240 407 aaKnown RBP30.77■■■□□ 2.52
SRM-205ENST00000487300 ZNF827Q17R98 1081 aa30.77■■■□□ 2.52
SRM-205ENST00000487300 SYTL4Q96C24 671 aaPredicted RBP30.77■■■□□ 2.52
SRM-205ENST00000487300 TNNT2P45379 298 aaPredicted RBP30.76■■■□□ 2.51
SRM-205ENST00000487300 IGSF1Q8N6C5 1336 aa30.74■■■□□ 2.51
SRM-205ENST00000487300 AKT1S1Q96B36 256 aa30.74■■■□□ 2.51
SRM-205ENST00000487300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.74■■■□□ 2.51
SRM-205ENST00000487300 PTGER2P43116 358 aa30.73■■■□□ 2.51
SRM-205ENST00000487300 AMER1Q5JTC6 1135 aaPredicted RBP30.73■■■□□ 2.51
SRM-205ENST00000487300 NKX1-1Q15270 411 aaPredicted RBP30.72■■■□□ 2.51
SRM-205ENST00000487300 ZBTB7AO95365 584 aa30.71■■■□□ 2.51
SRM-205ENST00000487300 KNSTRNQ9Y448 316 aa30.71■■■□□ 2.51
SRM-205ENST00000487300 SGIP1Q9BQI5 828 aa30.69■■■□□ 2.5
SRM-205ENST00000487300 MTFR1LQ9H019 292 aa30.69■■■□□ 2.5
SRM-205ENST00000487300 SPG7Q9UQ90 795 aa30.69■■■□□ 2.5
SRM-205ENST00000487300 MORC1Q86VD1 984 aa30.68■■■□□ 2.5
SRM-205ENST00000487300 PER1O15534 1290 aaPredicted RBP30.66■■■□□ 2.5
SRM-205ENST00000487300 PPP1R1BQ9UD71 204 aaPredicted RBP30.66■■■□□ 2.5
SRM-205ENST00000487300 KCNQ4P56696 695 aa30.65■■■□□ 2.5
SRM-205ENST00000487300 C4BP0C0L5 1744 aa30.64■■■□□ 2.5
SRM-205ENST00000487300 UBR3Q6ZT12 1888 aa30.64■■■□□ 2.5
SRM-205ENST00000487300 CCNL1Q9UK58 526 aaPredicted RBP30.64■■■□□ 2.5
SRM-205ENST00000487300 PNPLA7Q6ZV29 1317 aa30.64■■■□□ 2.5
SRM-205ENST00000487300 ZNF831Q5JPB2 1677 aa30.64■■■□□ 2.5
SRM-205ENST00000487300 PALLDQ8WX93 1383 aa30.64■■■□□ 2.5
SRM-205ENST00000487300 PHKG2P15735 406 aa30.62■■■□□ 2.49
SRM-205ENST00000487300 ATF5Q9Y2D1 282 aaPredicted RBP30.62■■■□□ 2.49
SRM-205ENST00000487300 KDRP35968 1356 aa30.62■■■□□ 2.49
SRM-205ENST00000487300 VIRMAQ69YN4 1812 aaKnown RBP30.61■■■□□ 2.49
SRM-205ENST00000487300 MPRIPQ6WCQ1 1025 aa30.6■■■□□ 2.49
SRM-205ENST00000487300 NPC1L1Q9UHC9 1359 aa30.6■■■□□ 2.49
SRM-205ENST00000487300 IFNL2Q8IZJ0 200 aa30.59■■■□□ 2.49
SRM-205ENST00000487300 SCN11AQ9UI33 1791 aa30.59■■■□□ 2.49
SRM-205ENST00000487300 SLC16A10Q8TF71 515 aa30.58■■■□□ 2.49
SRM-205ENST00000487300 PIGBQ92521 554 aa30.58■■■□□ 2.49
SRM-205ENST00000487300 MAP3K5Q99683 1374 aa30.56■■■□□ 2.48
SRM-205ENST00000487300 SMARCC1Q92922 1105 aaPredicted RBP30.55■■■□□ 2.48
SRM-205ENST00000487300 TFCP2L1Q9NZI6 479 aa30.55■■■□□ 2.48
SRM-205ENST00000487300 COL5A3P25940 1745 aaPredicted RBP30.54■■■□□ 2.48
SRM-205ENST00000487300 IL13P35225 146 aa30.54■■■□□ 2.48
SRM-205ENST00000487300 KDM6AO15550 1401 aaPredicted RBP30.54■■■□□ 2.48
SRM-205ENST00000487300 AEBP1Q8IUX7 1158 aa30.53■■■□□ 2.48
SRM-205ENST00000487300 UTRNP46939 3433 aa30.53■■■□□ 2.48
SRM-205ENST00000487300 COL3A1P02461 1466 aaPredicted RBP30.51■■■□□ 2.48
SRM-205ENST00000487300 CICQ96RK0 1608 aaPredicted RBP30.51■■■□□ 2.47
SRM-205ENST00000487300 ADAMTS7Q9UKP4 1686 aa30.5■■■□□ 2.47
SRM-205ENST00000487300 HMGB2P26583 209 aaKnown RBP30.5■■■□□ 2.47
SRM-205ENST00000487300 FHDC1Q9C0D6 1143 aaPredicted RBP30.5■■■□□ 2.47
SRM-205ENST00000487300 TMOD3Q9NYL9 352 aa30.5■■■□□ 2.47
SRM-205ENST00000487300 AMOTQ4VCS5 1084 aa30.49■■■□□ 2.47
SRM-205ENST00000487300 MTHFSP49914 203 aa30.48■■■□□ 2.47
SRM-205ENST00000487300 PLEKHO1Q53GL0 409 aaPredicted RBP30.48■■■□□ 2.47
SRM-205ENST00000487300 ARXQ96QS3 562 aa30.48■■■□□ 2.47
SRM-205ENST00000487300 SYT17Q9BSW7 474 aa30.47■■■□□ 2.47
SRM-205ENST00000487300 HSP90AB1P08238 724 aaKnown RBP30.46■■■□□ 2.47
SRM-205ENST00000487300 SULT6B1Q6IMI4 303 aa30.46■■■□□ 2.47
SRM-205ENST00000487300 DCAF5Q96JK2 942 aa30.46■■■□□ 2.47
SRM-205ENST00000487300 GOLGB1Q14789 3259 aaKnown RBP30.45■■■□□ 2.47
SRM-205ENST00000487300 ERVV-2B6SEH9 535 aa30.45■■■□□ 2.47
SRM-205ENST00000487300 CC2D1BQ5T0F9 858 aaKnown RBP30.45■■■□□ 2.47
SRM-205ENST00000487300 COL23A1Q86Y22 540 aaPredicted RBP30.45■■■□□ 2.47
SRM-205ENST00000487300 ASAP1Q9ULH1 1129 aa30.45■■■□□ 2.47
SRM-205ENST00000487300 LOC102724428A0A0B4J2F2 783 aa30.44■■■□□ 2.46
SRM-205ENST00000487300 SIK1P57059 783 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms