RNA–Protein interactions for RNA: ENST00000486971.1

C3orf38-204, Transcript of chromosome 3 open reading frame 38, humanhuman

TSL 2 BASIC

Gene C3orf38, Length 1,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf38-204ENST00000486971 DOT1LQ8TEK3 1739 aa18.57■□□□□ 0.56
C3orf38-204ENST00000486971 IL2RBP14784 551 aa18.57■□□□□ 0.56
C3orf38-204ENST00000486971 SYTL4Q96C24 671 aaPredicted RBP18.57■□□□□ 0.56
C3orf38-204ENST00000486971 ARHGEF25Q86VW2 580 aa18.56■□□□□ 0.56
C3orf38-204ENST00000486971 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
C3orf38-204ENST00000486971 CCNL1Q9UK58 526 aaPredicted RBP18.56■□□□□ 0.56
C3orf38-204ENST00000486971 KCNH5Q8NCM2 988 aa18.55■□□□□ 0.56
C3orf38-204ENST00000486971 MPHOSPH9Q99550 1183 aa18.55■□□□□ 0.56
C3orf38-204ENST00000486971 C5P01031 1676 aa18.54■□□□□ 0.56
C3orf38-204ENST00000486971 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
C3orf38-204ENST00000486971 NLRP2Q9NX02 1062 aa18.53■□□□□ 0.56
C3orf38-204ENST00000486971 FAM161AQ3B820 660 aa18.52■□□□□ 0.56
C3orf38-204ENST00000486971 TNRC6CQ9HCJ0 1690 aaKnown RBP18.51■□□□□ 0.55
C3orf38-204ENST00000486971 PLEKHG2Q9H7P9 1386 aa18.51■□□□□ 0.55
C3orf38-204ENST00000486971 PKD1L3Q7Z443 1732 aa18.51■□□□□ 0.55
C3orf38-204ENST00000486971 PPARGC1BQ86YN6 1023 aaKnown RBP18.5■□□□□ 0.55
C3orf38-204ENST00000486971 FLAD1Q8NFF5 587 aa18.5■□□□□ 0.55
C3orf38-204ENST00000486971 USP54Q70EL1 1684 aa18.5■□□□□ 0.55
C3orf38-204ENST00000486971 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
C3orf38-204ENST00000486971 KDM2AQ9Y2K7 1162 aa18.49■□□□□ 0.55
C3orf38-204ENST00000486971 ANKRD36BQ8N2N9 1353 aa18.48■□□□□ 0.55
C3orf38-204ENST00000486971 SMC1BQ8NDV3 1235 aa18.48■□□□□ 0.55
C3orf38-204ENST00000486971 NFAT5O94916 1531 aa18.48■□□□□ 0.55
C3orf38-204ENST00000486971 KDM2BQ8NHM5 1336 aa18.48■□□□□ 0.55
C3orf38-204ENST00000486971 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
C3orf38-204ENST00000486971 ERBB3P21860 1342 aa18.47■□□□□ 0.55
C3orf38-204ENST00000486971 USP47Q96K76 1375 aa18.46■□□□□ 0.55
C3orf38-204ENST00000486971 KCPQ6ZWJ8 1503 aa18.46■□□□□ 0.55
C3orf38-204ENST00000486971 PRIM1P49642 420 aaKnown RBP18.46■□□□□ 0.55
C3orf38-204ENST00000486971 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
C3orf38-204ENST00000486971 LTN1O94822 1766 aa18.45■□□□□ 0.54
C3orf38-204ENST00000486971 N4BP2Q86UW6 1770 aaPredicted RBP18.45■□□□□ 0.54
C3orf38-204ENST00000486971 ARHGAP27Q6ZUM4 889 aa18.45■□□□□ 0.54
C3orf38-204ENST00000486971 BCS1LQ9Y276 419 aa18.45■□□□□ 0.54
C3orf38-204ENST00000486971 C10orf71Q711Q0 1435 aa18.45■□□□□ 0.54
C3orf38-204ENST00000486971 HMGB2P26583 209 aaKnown RBP18.44■□□□□ 0.54
C3orf38-204ENST00000486971 CABP2Q9NPB3 220 aa18.44■□□□□ 0.54
C3orf38-204ENST00000486971 NSD2O96028 1365 aa18.43■□□□□ 0.54
C3orf38-204ENST00000486971 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
C3orf38-204ENST00000486971 C9orf131Q5VYM1 1079 aa18.41■□□□□ 0.54
C3orf38-204ENST00000486971 CABP1Q9NZU7 370 aa18.41■□□□□ 0.54
C3orf38-204ENST00000486971 KIF13BQ9NQT8 1826 aa18.41■□□□□ 0.54
C3orf38-204ENST00000486971 PXDNLA1KZ92 1463 aa18.4■□□□□ 0.54
C3orf38-204ENST00000486971 RRAGCQ9HB90 399 aa18.4■□□□□ 0.54
C3orf38-204ENST00000486971 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
C3orf38-204ENST00000486971 KIAA1210Q9ULL0 1709 aa18.4■□□□□ 0.54
C3orf38-204ENST00000486971 FAM208AQ9UK61 1670 aaKnown RBP18.39■□□□□ 0.53
C3orf38-204ENST00000486971 PHF14O94880 888 aa18.39■□□□□ 0.53
C3orf38-204ENST00000486971 AK7Q96M32 723 aa18.39■□□□□ 0.53
C3orf38-204ENST00000486971 KIAA1551Q9HCM1 1747 aa18.39■□□□□ 0.53
C3orf38-204ENST00000486971 UBR3Q6ZT12 1888 aa18.39■□□□□ 0.53
C3orf38-204ENST00000486971 NSD3Q9BZ95 1437 aa18.39■□□□□ 0.53
C3orf38-204ENST00000486971 TOGARAM1Q9Y4F4 1720 aa18.38■□□□□ 0.53
C3orf38-204ENST00000486971 ANKRD24Q8TF21 1146 aa18.38■□□□□ 0.53
C3orf38-204ENST00000486971 PRDM10Q9NQV6 1147 aa18.37■□□□□ 0.53
C3orf38-204ENST00000486971 TTC21BQ7Z4L5 1316 aa18.37■□□□□ 0.53
C3orf38-204ENST00000486971 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
C3orf38-204ENST00000486971 BRCA1P38398 1863 aaKnown RBP18.36■□□□□ 0.53
C3orf38-204ENST00000486971 MLLT1Q03111 559 aaPredicted RBP18.36■□□□□ 0.53
C3orf38-204ENST00000486971 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
C3orf38-204ENST00000486971 FCHSD2O94868 740 aa18.35■□□□□ 0.53
C3orf38-204ENST00000486971 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
C3orf38-204ENST00000486971 FOXN1O15353 648 aa18.34■□□□□ 0.53
C3orf38-204ENST00000486971 AIDAQ96BJ3 306 aa18.34■□□□□ 0.53
C3orf38-204ENST00000486971 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
C3orf38-204ENST00000486971 TGFB2P61812 414 aa18.33■□□□□ 0.52
C3orf38-204ENST00000486971 CENPJQ9HC77 1338 aaPredicted RBP18.31■□□□□ 0.52
C3orf38-204ENST00000486971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.31■□□□□ 0.52
C3orf38-204ENST00000486971 A0A0G2JLW4 131 aa18.31■□□□□ 0.52
C3orf38-204ENST00000486971 ABHD8Q96I13 439 aa18.31■□□□□ 0.52
C3orf38-204ENST00000486971 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
C3orf38-204ENST00000486971 CTCFP49711 727 aaPredicted RBP18.3■□□□□ 0.52
C3orf38-204ENST00000486971 ZNF692Q9BU19 519 aaPredicted RBP18.3■□□□□ 0.52
C3orf38-204ENST00000486971 MKRN1Q9UHC7 482 aaKnown RBP18.29■□□□□ 0.52
C3orf38-204ENST00000486971 SBF1O95248 1867 aa18.29■□□□□ 0.52
C3orf38-204ENST00000486971 MMP10P09238 476 aa18.28■□□□□ 0.52
C3orf38-204ENST00000486971 SMIM5Q71RC9 77 aa18.28■□□□□ 0.52
C3orf38-204ENST00000486971 SSFA2P28290 1259 aa18.27■□□□□ 0.52
C3orf38-204ENST00000486971 AMIGO3Q86WK7 504 aa18.27■□□□□ 0.52
C3orf38-204ENST00000486971 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
C3orf38-204ENST00000486971 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
C3orf38-204ENST00000486971 DPEP1P16444 411 aa18.25■□□□□ 0.51
C3orf38-204ENST00000486971 LTV1Q96GA3 475 aaPredicted RBP18.25■□□□□ 0.51
C3orf38-204ENST00000486971 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
C3orf38-204ENST00000486971 CCDC85CA6NKD9 419 aa18.24■□□□□ 0.51
C3orf38-204ENST00000486971 VEGFAP15692 232 aaPredicted RBP18.24■□□□□ 0.51
C3orf38-204ENST00000486971 CREBZFQ9NS37 354 aa18.23■□□□□ 0.51
C3orf38-204ENST00000486971 CCDC87Q9NVE4 849 aa18.23■□□□□ 0.51
C3orf38-204ENST00000486971 RGPD2P0DJD1 1756 aa18.22■□□□□ 0.51
C3orf38-204ENST00000486971 LBX1P52954 281 aa18.22■□□□□ 0.51
C3orf38-204ENST00000486971 MEGF6O75095 1541 aa18.22■□□□□ 0.51
C3orf38-204ENST00000486971 EVC2Q86UK5 1308 aa18.22■□□□□ 0.51
C3orf38-204ENST00000486971 ZC3H4Q9UPT8 1303 aaKnown RBP18.22■□□□□ 0.51
C3orf38-204ENST00000486971 C4AP0C0L4 1744 aa18.21■□□□□ 0.51
C3orf38-204ENST00000486971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.51
C3orf38-204ENST00000486971 TIAM2Q8IVF5 1701 aa18.2■□□□□ 0.5
C3orf38-204ENST00000486971 SMARCC1Q92922 1105 aaPredicted RBP18.2■□□□□ 0.5
C3orf38-204ENST00000486971 ITGB4P16144 1822 aa18.2■□□□□ 0.5
C3orf38-204ENST00000486971 USP31Q70CQ4 1352 aa18.19■□□□□ 0.5
C3orf38-204ENST00000486971 GNPATO15228 680 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms