RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SPINT1O43278 529 aa9.32□□□□□ -0.92
COPS3-209ENST00000486810 PTGIRP43119 386 aa9.32□□□□□ -0.92
COPS3-209ENST00000486810 MAP7D1Q3KQU3 841 aa9.32□□□□□ -0.92
COPS3-209ENST00000486810 ZNF787Q6DD87 383 aa9.32□□□□□ -0.92
COPS3-209ENST00000486810 BMP2P12643 396 aa9.31□□□□□ -0.92
COPS3-209ENST00000486810 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
COPS3-209ENST00000486810 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
COPS3-209ENST00000486810 ARID3CA6NKF2 412 aa9.3□□□□□ -0.92
COPS3-209ENST00000486810 USP17L5A8MUK1 530 aa9.3□□□□□ -0.92
COPS3-209ENST00000486810 ATP5J2-PTCD1G3V325 749 aa9.3□□□□□ -0.92
COPS3-209ENST00000486810 ATP9BO43861 1147 aa9.3□□□□□ -0.92
COPS3-209ENST00000486810 STAU1O95793 577 aaKnown RBP9.3□□□□□ -0.92
COPS3-209ENST00000486810 NCOA4Q13772 614 aa9.3□□□□□ -0.92
COPS3-209ENST00000486810 SCARF1Q14162 830 aa9.3□□□□□ -0.92
COPS3-209ENST00000486810 TFIP11Q9UBB9 837 aaKnown RBP9.3□□□□□ -0.92
COPS3-209ENST00000486810 PALM3A6NDB9 673 aaPredicted RBP9.29□□□□□ -0.92
COPS3-209ENST00000486810 SOBPA7XYQ1 873 aa9.29□□□□□ -0.92
COPS3-209ENST00000486810 C11orf95C9JLR9 678 aaPredicted RBP9.29□□□□□ -0.92
COPS3-209ENST00000486810 CTSOP43234 321 aaPredicted RBP9.29□□□□□ -0.92
COPS3-209ENST00000486810 USP4Q13107 963 aa9.29□□□□□ -0.92
COPS3-209ENST00000486810 INSM2Q96T92 566 aaPredicted RBP9.29□□□□□ -0.92
COPS3-209ENST00000486810 PPP1R12CQ9BZL4 782 aa9.29□□□□□ -0.92
COPS3-209ENST00000486810 SENP2Q9HC62 589 aa9.29□□□□□ -0.92
COPS3-209ENST00000486810 USP17L3A6NCW0 530 aa9.28□□□□□ -0.92
COPS3-209ENST00000486810 USP17L4A6NCW7 530 aa9.28□□□□□ -0.92
COPS3-209ENST00000486810 UPP2O95045 317 aa9.28□□□□□ -0.92
COPS3-209ENST00000486810 FOXD4L5Q5VV16 416 aaPredicted RBP9.28□□□□□ -0.92
COPS3-209ENST00000486810 USP17L2Q6R6M4 530 aa9.28□□□□□ -0.92
COPS3-209ENST00000486810 USP17L1Q7RTZ2 530 aa9.28□□□□□ -0.92
COPS3-209ENST00000486810 CYP2U1Q7Z449 544 aa9.28□□□□□ -0.92
COPS3-209ENST00000486810 PLEKHM2Q8IWE5 1019 aa9.28□□□□□ -0.92
COPS3-209ENST00000486810 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
COPS3-209ENST00000486810 C1orf115Q9H7X2 142 aa9.28□□□□□ -0.92
COPS3-209ENST00000486810 MAFBQ9Y5Q3 323 aaPredicted RBP9.28□□□□□ -0.92
COPS3-209ENST00000486810 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
COPS3-209ENST00000486810 MYCP01106 439 aaPredicted RBP9.27□□□□□ -0.93
COPS3-209ENST00000486810 DNMT3LQ9UJW3 386 aa9.27□□□□□ -0.93
COPS3-209ENST00000486810 PCDHGA11Q9Y5H2 935 aa9.27□□□□□ -0.93
COPS3-209ENST00000486810 EML3Q32P44 896 aa9.26□□□□□ -0.93
COPS3-209ENST00000486810 CFAP70Q5T0N1 1121 aa9.26□□□□□ -0.93
COPS3-209ENST00000486810 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
COPS3-209ENST00000486810 RAB6BQ9NRW1 208 aa9.26□□□□□ -0.93
COPS3-209ENST00000486810 LZTS3O60299 673 aaPredicted RBP9.25□□□□□ -0.93
COPS3-209ENST00000486810 IL2RAP01589 272 aa9.25□□□□□ -0.93
COPS3-209ENST00000486810 SCNN1DP51172 638 aa9.25□□□□□ -0.93
COPS3-209ENST00000486810 TRIM52Q96A61 297 aa9.25□□□□□ -0.93
COPS3-209ENST00000486810 ETNK1Q9HBU6 452 aa9.25□□□□□ -0.93
COPS3-209ENST00000486810 HRH3Q9Y5N1 445 aa9.25□□□□□ -0.93
COPS3-209ENST00000486810 TTLL8A6PVC2 850 aa9.24□□□□□ -0.93
COPS3-209ENST00000486810 GNRH1P01148 92 aa9.24□□□□□ -0.93
COPS3-209ENST00000486810 RNF217Q8TC41 542 aa9.24□□□□□ -0.93
COPS3-209ENST00000486810 FIGNL2A6NMB9 653 aa9.23□□□□□ -0.93
COPS3-209ENST00000486810 ZBTB7BO15156 539 aaPredicted RBP9.23□□□□□ -0.93
COPS3-209ENST00000486810 CLN3Q13286 438 aa9.23□□□□□ -0.93
COPS3-209ENST00000486810 ERICH6Q7L0X2 663 aa9.23□□□□□ -0.93
COPS3-209ENST00000486810 SIRT1Q96EB6 747 aa9.23□□□□□ -0.93
COPS3-209ENST00000486810 POLMQ9NP87 494 aaPredicted RBP9.23□□□□□ -0.93
COPS3-209ENST00000486810 KIAA1024Q9UPX6 916 aa9.23□□□□□ -0.93
COPS3-209ENST00000486810 NOD1Q9Y239 953 aa9.23□□□□□ -0.93
COPS3-209ENST00000486810 TMEM229AB2RXF0 380 aa9.22□□□□□ -0.93
COPS3-209ENST00000486810 MEN1O00255 615 aa9.22□□□□□ -0.93
COPS3-209ENST00000486810 RNF144AP50876 292 aaPredicted RBP9.22□□□□□ -0.93
COPS3-209ENST00000486810 GTF2IP78347 998 aa9.22□□□□□ -0.93
COPS3-209ENST00000486810 CLDN10P78369 228 aa9.22□□□□□ -0.93
COPS3-209ENST00000486810 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
COPS3-209ENST00000486810 XAGE2Q96GT9 111 aa9.22□□□□□ -0.93
COPS3-209ENST00000486810 ESF1Q9H501 851 aaKnown RBP9.22□□□□□ -0.93
COPS3-209ENST00000486810 MKRN1Q9UHC7 482 aaKnown RBP9.22□□□□□ -0.93
COPS3-209ENST00000486810 DKK1O94907 266 aa9.21□□□□□ -0.94
COPS3-209ENST00000486810 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.94
COPS3-209ENST00000486810 GDF10P55107 478 aa9.2□□□□□ -0.94
COPS3-209ENST00000486810 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
COPS3-209ENST00000486810 ESYT1Q9BSJ8 1104 aa9.2□□□□□ -0.94
COPS3-209ENST00000486810 FHDC1Q9C0D6 1143 aaPredicted RBP9.2□□□□□ -0.94
COPS3-209ENST00000486810 MAN1A2O60476 641 aa9.19□□□□□ -0.94
COPS3-209ENST00000486810 INHAP05111 366 aa9.19□□□□□ -0.94
COPS3-209ENST00000486810 GRIP2Q9C0E4 1043 aa9.19□□□□□ -0.94
COPS3-209ENST00000486810 WASLO00401 505 aaPredicted RBP9.18□□□□□ -0.94
COPS3-209ENST00000486810 GPC1P35052 558 aa9.18□□□□□ -0.94
COPS3-209ENST00000486810 SRPK2P78362 688 aaKnown RBP9.18□□□□□ -0.94
COPS3-209ENST00000486810 CENPCQ03188 943 aa9.18□□□□□ -0.94
COPS3-209ENST00000486810 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.17□□□□□ -0.94
COPS3-209ENST00000486810 OGFOD1Q8N543 542 aa9.17□□□□□ -0.94
COPS3-209ENST00000486810 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.17□□□□□ -0.94
COPS3-209ENST00000486810 ZNF775Q96BV0 537 aaPredicted RBP9.17□□□□□ -0.94
COPS3-209ENST00000486810 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
COPS3-209ENST00000486810 RFX1P22670 979 aa9.16□□□□□ -0.94
COPS3-209ENST00000486810 CRTC2Q53ET0 693 aaPredicted RBP9.16□□□□□ -0.94
COPS3-209ENST00000486810 PRICKLE2Q7Z3G6 844 aa9.16□□□□□ -0.94
COPS3-209ENST00000486810 TRIM50Q86XT4 487 aa9.16□□□□□ -0.94
COPS3-209ENST00000486810 CCDC82Q8N4S0 544 aa9.16□□□□□ -0.94
COPS3-209ENST00000486810 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
COPS3-209ENST00000486810 ZNF358Q9NW07 568 aa9.16□□□□□ -0.94
COPS3-209ENST00000486810 SENP3-EIF4A1A0A087X0R7 540 aa9.15□□□□□ -0.94
COPS3-209ENST00000486810 SUPT5HO00267 1087 aaKnown RBP9.15□□□□□ -0.94
COPS3-209ENST00000486810 PTSQ03393 145 aa9.15□□□□□ -0.94
COPS3-209ENST00000486810 CDCA8Q53HL2 280 aa9.15□□□□□ -0.94
COPS3-209ENST00000486810 ESCO1Q5FWF5 840 aa9.15□□□□□ -0.94
COPS3-209ENST00000486810 LYSMD3Q7Z3D4 306 aa9.15□□□□□ -0.94
COPS3-209ENST00000486810 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms