RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TNS4Q8IZW8 715 aa22.29■■□□□ 1.16
U2AF1-211ENST00000486519 SYTL4Q96C24 671 aaPredicted RBP22.29■■□□□ 1.16
U2AF1-211ENST00000486519 TAF1LQ8IZX4 1826 aa22.29■■□□□ 1.16
U2AF1-211ENST00000486519 IGSF1Q8N6C5 1336 aa22.29■■□□□ 1.16
U2AF1-211ENST00000486519 CENPJQ9HC77 1338 aaPredicted RBP22.29■■□□□ 1.16
U2AF1-211ENST00000486519 TOGARAM1Q9Y4F4 1720 aa22.28■■□□□ 1.16
U2AF1-211ENST00000486519 PCNTO95613 3336 aa22.28■■□□□ 1.16
U2AF1-211ENST00000486519 CCNL1Q9UK58 526 aaPredicted RBP22.27■■□□□ 1.16
U2AF1-211ENST00000486519 TOMM70O94826 608 aa22.25■■□□□ 1.15
U2AF1-211ENST00000486519 SMIM5Q71RC9 77 aa22.25■■□□□ 1.15
U2AF1-211ENST00000486519 AMIGO3Q86WK7 504 aa22.25■■□□□ 1.15
U2AF1-211ENST00000486519 JMYQ8N9B5 988 aa22.25■■□□□ 1.15
U2AF1-211ENST00000486519 ANKRD24Q8TF21 1146 aa22.25■■□□□ 1.15
U2AF1-211ENST00000486519 KLRG1Q96E93 195 aa22.25■■□□□ 1.15
U2AF1-211ENST00000486519 NMRK2Q9NPI5 230 aa22.25■■□□□ 1.15
U2AF1-211ENST00000486519 RGPD2P0DJD1 1756 aa22.25■■□□□ 1.15
U2AF1-211ENST00000486519 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
U2AF1-211ENST00000486519 MON2Q7Z3U7 1717 aa22.24■■□□□ 1.15
U2AF1-211ENST00000486519 STAC3Q96MF2 364 aa22.24■■□□□ 1.15
U2AF1-211ENST00000486519 KIAA1551Q9HCM1 1747 aa22.23■■□□□ 1.15
U2AF1-211ENST00000486519 FAM208AQ9UK61 1670 aaKnown RBP22.21■■□□□ 1.15
U2AF1-211ENST00000486519 TTC21AQ8NDW8 1320 aa22.21■■□□□ 1.15
U2AF1-211ENST00000486519 RAB3GAP2Q9H2M9 1393 aa22.21■■□□□ 1.15
U2AF1-211ENST00000486519 N4BP2Q86UW6 1770 aaPredicted RBP22.2■■□□□ 1.14
U2AF1-211ENST00000486519 UBR3Q6ZT12 1888 aa22.19■■□□□ 1.14
U2AF1-211ENST00000486519 SLC34A2O95436 690 aa22.16■■□□□ 1.14
U2AF1-211ENST00000486519 NME9Q86XW9 330 aa22.16■■□□□ 1.14
U2AF1-211ENST00000486519 C4BP0C0L5 1744 aa22.16■■□□□ 1.14
U2AF1-211ENST00000486519 KTN1Q86UP2 1357 aaKnown RBP22.15■■□□□ 1.14
U2AF1-211ENST00000486519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.15■■□□□ 1.14
U2AF1-211ENST00000486519 USP31Q70CQ4 1352 aa22.14■■□□□ 1.14
U2AF1-211ENST00000486519 ZNF692Q9BU19 519 aaPredicted RBP22.14■■□□□ 1.13
U2AF1-211ENST00000486519 MEGF6O75095 1541 aa22.14■■□□□ 1.13
U2AF1-211ENST00000486519 LTV1Q96GA3 475 aaPredicted RBP22.13■■□□□ 1.13
U2AF1-211ENST00000486519 KIF13BQ9NQT8 1826 aa22.13■■□□□ 1.13
U2AF1-211ENST00000486519 USP47Q96K76 1375 aa22.12■■□□□ 1.13
U2AF1-211ENST00000486519 PXDNLA1KZ92 1463 aa22.11■■□□□ 1.13
U2AF1-211ENST00000486519 RBM46Q8TBY0 533 aaKnown RBP22.11■■□□□ 1.13
U2AF1-211ENST00000486519 EVC2Q86UK5 1308 aa22.1■■□□□ 1.13
U2AF1-211ENST00000486519 PKD1L3Q7Z443 1732 aa22.1■■□□□ 1.13
U2AF1-211ENST00000486519 CD163L1Q9NR16 1453 aa22.09■■□□□ 1.13
U2AF1-211ENST00000486519 PHF14O94880 888 aa22.09■■□□□ 1.13
U2AF1-211ENST00000486519 BRCA1P38398 1863 aaKnown RBP22.09■■□□□ 1.13
U2AF1-211ENST00000486519 SBNO2Q9Y2G9 1366 aa22.08■■□□□ 1.12
U2AF1-211ENST00000486519 KCPQ6ZWJ8 1503 aa22.06■■□□□ 1.12
U2AF1-211ENST00000486519 ITGB4P16144 1822 aa22.06■■□□□ 1.12
U2AF1-211ENST00000486519 HSPA1AP0DMV8 641 aaKnown RBP22.06■■□□□ 1.12
U2AF1-211ENST00000486519 HSPA1BP0DMV9 641 aaKnown RBP22.06■■□□□ 1.12
U2AF1-211ENST00000486519 ZCRB1Q8TBF4 217 aaKnown RBP22.05■■□□□ 1.12
U2AF1-211ENST00000486519 MAP2P11137 1827 aaKnown RBP22.04■■□□□ 1.12
U2AF1-211ENST00000486519 PALLDQ8WX93 1383 aa22.04■■□□□ 1.12
U2AF1-211ENST00000486519 FLAD1Q8NFF5 587 aa22.04■■□□□ 1.12
U2AF1-211ENST00000486519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.03■■□□□ 1.12
U2AF1-211ENST00000486519 BCS1LQ9Y276 419 aa22.03■■□□□ 1.12
U2AF1-211ENST00000486519 ARHGAP27Q6ZUM4 889 aa22.02■■□□□ 1.12
U2AF1-211ENST00000486519 IP6K1Q92551 441 aa22.02■■□□□ 1.12
U2AF1-211ENST00000486519 A0A0G2JLW4 131 aa22.01■■□□□ 1.11
U2AF1-211ENST00000486519 FBLN1P23142 703 aa22.01■■□□□ 1.11
U2AF1-211ENST00000486519 FSTL1Q12841 308 aa22.01■■□□□ 1.11
U2AF1-211ENST00000486519 AK7Q96M32 723 aa22■■□□□ 1.11
U2AF1-211ENST00000486519 ARFGEF1Q9Y6D6 1849 aa21.99■■□□□ 1.11
U2AF1-211ENST00000486519 TNRC6CQ9HCJ0 1690 aaKnown RBP21.99■■□□□ 1.11
U2AF1-211ENST00000486519 C9orf131Q5VYM1 1079 aa21.99■■□□□ 1.11
U2AF1-211ENST00000486519 C16orf71Q8IYS4 520 aaPredicted RBP21.99■■□□□ 1.11
U2AF1-211ENST00000486519 SBF1O95248 1867 aa21.97■■□□□ 1.11
U2AF1-211ENST00000486519 USHBP1Q8N6Y0 703 aa21.97■■□□□ 1.11
U2AF1-211ENST00000486519 RRAGCQ9HB90 399 aa21.97■■□□□ 1.11
U2AF1-211ENST00000486519 MMP10P09238 476 aa21.96■■□□□ 1.11
U2AF1-211ENST00000486519 LINC00116Q8NCU8 138 aa21.96■■□□□ 1.11
U2AF1-211ENST00000486519 MPRIPQ6WCQ1 1025 aa21.95■■□□□ 1.1
U2AF1-211ENST00000486519 C10orf71Q711Q0 1435 aa21.95■■□□□ 1.1
U2AF1-211ENST00000486519 DPEP1P16444 411 aa21.94■■□□□ 1.1
U2AF1-211ENST00000486519 MAP3K19Q56UN5 1328 aa21.94■■□□□ 1.1
U2AF1-211ENST00000486519 HOXC9P31274 260 aa21.93■■□□□ 1.1
U2AF1-211ENST00000486519 FCHSD2O94868 740 aa21.92■■□□□ 1.1
U2AF1-211ENST00000486519 NBPF6Q5VWK0 638 aa21.92■■□□□ 1.1
U2AF1-211ENST00000486519 NBPF4Q96M43 638 aa21.92■■□□□ 1.1
U2AF1-211ENST00000486519 PLEKHG2Q9H7P9 1386 aa21.91■■□□□ 1.1
U2AF1-211ENST00000486519 SSFA2P28290 1259 aa21.91■■□□□ 1.1
U2AF1-211ENST00000486519 EDC4Q6P2E9 1401 aaKnown RBP21.9■■□□□ 1.1
U2AF1-211ENST00000486519 C4AP0C0L4 1744 aa21.9■■□□□ 1.1
U2AF1-211ENST00000486519 KCNA3P22001 575 aa21.89■■□□□ 1.09
U2AF1-211ENST00000486519 TGFB2P61812 414 aa21.89■■□□□ 1.09
U2AF1-211ENST00000486519 SLC12A5Q9H2X9 1139 aa21.89■■□□□ 1.09
U2AF1-211ENST00000486519 ITPK1Q13572 414 aa21.88■■□□□ 1.09
U2AF1-211ENST00000486519 SMC1BQ8NDV3 1235 aa21.88■■□□□ 1.09
U2AF1-211ENST00000486519 NSD3Q9BZ95 1437 aa21.88■■□□□ 1.09
U2AF1-211ENST00000486519 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
U2AF1-211ENST00000486519 GNPATO15228 680 aa21.87■■□□□ 1.09
U2AF1-211ENST00000486519 CYP27B1O15528 508 aa21.87■■□□□ 1.09
U2AF1-211ENST00000486519 PIGBQ92521 554 aa21.87■■□□□ 1.09
U2AF1-211ENST00000486519 RNF181Q9P0P0 153 aa21.87■■□□□ 1.09
U2AF1-211ENST00000486519 KDM2BQ8NHM5 1336 aa21.86■■□□□ 1.09
U2AF1-211ENST00000486519 TMC1Q8TDI8 760 aa21.86■■□□□ 1.09
U2AF1-211ENST00000486519 LOC102724428A0A0B4J2F2 783 aa21.84■■□□□ 1.09
U2AF1-211ENST00000486519 SIK1P57059 783 aa21.84■■□□□ 1.09
U2AF1-211ENST00000486519 AMPHP49418 695 aa21.83■■□□□ 1.09
U2AF1-211ENST00000486519 PCDH11XQ9BZA7 1347 aa21.82■■□□□ 1.08
U2AF1-211ENST00000486519 PCDH11YQ9BZA8 1340 aa21.82■■□□□ 1.08
U2AF1-211ENST00000486519 SMARCC1Q92922 1105 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms