RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 GPKOWQ92917 476 aaPredicted RBP eCLIP7.48□□□□□ -1.21
COMMD6-211ENST00000486516 LRRC4BQ9NT99 713 aa7.48□□□□□ -1.21
COMMD6-211ENST00000486516 MKL2Q9ULH7 1088 aa7.48□□□□□ -1.21
COMMD6-211ENST00000486516 DIXDC1Q155Q3 683 aa7.47□□□□□ -1.21
COMMD6-211ENST00000486516 RTL5Q5HYW3 569 aaPredicted RBP7.47□□□□□ -1.21
COMMD6-211ENST00000486516 ZMYM1Q5SVZ6 1142 aa7.47□□□□□ -1.21
COMMD6-211ENST00000486516 GMCL1Q96IK5 515 aa7.47□□□□□ -1.21
COMMD6-211ENST00000486516 GAS2L1Q99501 681 aaPredicted RBP7.47□□□□□ -1.21
COMMD6-211ENST00000486516 OCSTAMPQ9BR26 566 aa7.47□□□□□ -1.21
COMMD6-211ENST00000486516 OXCT2Q9BYC2 517 aaPredicted RBP7.47□□□□□ -1.21
COMMD6-211ENST00000486516 SEMA6BQ9H3T3 888 aa7.47□□□□□ -1.21
COMMD6-211ENST00000486516 RRAGCQ9HB90 399 aa7.47□□□□□ -1.21
COMMD6-211ENST00000486516 CD163Q86VB7 1156 aa7.46□□□□□ -1.22
COMMD6-211ENST00000486516 TRERF1Q96PN7 1200 aa7.46□□□□□ -1.22
COMMD6-211ENST00000486516 CDV3Q9UKY7 258 aaKnown RBP7.46□□□□□ -1.22
COMMD6-211ENST00000486516 LILRB3O75022 631 aa7.45□□□□□ -1.22
COMMD6-211ENST00000486516 RNF144AP50876 292 aaPredicted RBP7.45□□□□□ -1.22
COMMD6-211ENST00000486516 PDXDC2PQ6P474 469 aa7.45□□□□□ -1.22
COMMD6-211ENST00000486516 ZBTB33Q86T24 672 aa7.45□□□□□ -1.22
COMMD6-211ENST00000486516 ERVH48-1M5A8F1 160 aa7.44□□□□□ -1.22
COMMD6-211ENST00000486516 TULP1O00294 542 aaPredicted RBP7.44□□□□□ -1.22
COMMD6-211ENST00000486516 HOXB4P17483 251 aaPredicted RBP7.44□□□□□ -1.22
COMMD6-211ENST00000486516 CHRNA4P43681 627 aa7.44□□□□□ -1.22
COMMD6-211ENST00000486516 DOC2BQ14184 412 aa7.44□□□□□ -1.22
COMMD6-211ENST00000486516 FOXD4L6Q3SYB3 417 aaPredicted RBP7.43□□□□□ -1.22
COMMD6-211ENST00000486516 FOXD4L3Q6VB84 417 aaPredicted RBP7.43□□□□□ -1.22
COMMD6-211ENST00000486516 LINC00114Q6XXX2 140 aa7.43□□□□□ -1.22
COMMD6-211ENST00000486516 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
COMMD6-211ENST00000486516 PARP9Q8IXQ6 854 aa7.43□□□□□ -1.22
COMMD6-211ENST00000486516 HELBQ8NG08 1087 aaPredicted RBP7.43□□□□□ -1.22
COMMD6-211ENST00000486516 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
COMMD6-211ENST00000486516 H7C1W4 665 aa7.42□□□□□ -1.22
COMMD6-211ENST00000486516 POU4F2Q12837 409 aa7.42□□□□□ -1.22
COMMD6-211ENST00000486516 CYLDQ9NQC7 956 aa7.42□□□□□ -1.22
COMMD6-211ENST00000486516 DYRK1BQ9Y463 629 aa7.42□□□□□ -1.22
COMMD6-211ENST00000486516 MYSM1Q5VVJ2 828 aa7.41□□□□□ -1.22
COMMD6-211ENST00000486516 ADAM32Q8TC27 787 aa7.41□□□□□ -1.22
COMMD6-211ENST00000486516 KLRG1Q96E93 195 aa7.41□□□□□ -1.22
COMMD6-211ENST00000486516 FKBPLQ9UIM3 349 aa7.41□□□□□ -1.22
COMMD6-211ENST00000486516 NSFL1CQ9UNZ2 370 aaKnown RBP7.41□□□□□ -1.22
COMMD6-211ENST00000486516 THBS1P07996 1170 aa7.4□□□□□ -1.22
COMMD6-211ENST00000486516 CTDSPL2Q05D32 466 aa7.4□□□□□ -1.22
COMMD6-211ENST00000486516 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
COMMD6-211ENST00000486516 EDARADDQ8WWZ3 215 aa7.4□□□□□ -1.22
COMMD6-211ENST00000486516 MEN1O00255 615 aa7.39□□□□□ -1.23
COMMD6-211ENST00000486516 MAP2K3P46734 347 aa7.39□□□□□ -1.23
COMMD6-211ENST00000486516 LRRN4Q8WUT4 740 aa7.39□□□□□ -1.23
COMMD6-211ENST00000486516 NUCKS1Q9H1E3 243 aaKnown RBP7.39□□□□□ -1.23
COMMD6-211ENST00000486516 SCO2A0A1W2PP80 73 aa7.38□□□□□ -1.23
COMMD6-211ENST00000486516 BTBD11A6QL63 1104 aa7.37□□□□□ -1.23
COMMD6-211ENST00000486516 NR6A1Q15406 480 aa7.37□□□□□ -1.23
COMMD6-211ENST00000486516 NBPF20Q3BBV1 942 aa7.37□□□□□ -1.23
COMMD6-211ENST00000486516 BARGINQ6ZT62 677 aa7.37□□□□□ -1.23
COMMD6-211ENST00000486516 AMPD1P23109 780 aa7.36□□□□□ -1.23
COMMD6-211ENST00000486516 TUSC1Q2TAM9 212 aa7.36□□□□□ -1.23
COMMD6-211ENST00000486516 A0A1W2PRU2 124 aa7.35□□□□□ -1.23
COMMD6-211ENST00000486516 PTK2Q05397 1052 aa7.35□□□□□ -1.23
COMMD6-211ENST00000486516 NBPF10Q6P3W6 841 aaKnown RBP7.35□□□□□ -1.23
COMMD6-211ENST00000486516 NBPF15Q8N660 670 aa7.35□□□□□ -1.23
COMMD6-211ENST00000486516 KDM2AQ9Y2K7 1162 aa7.35□□□□□ -1.23
COMMD6-211ENST00000486516 ATP5J2-PTCD1G3V325 749 aa7.34□□□□□ -1.23
COMMD6-211ENST00000486516 GDF2Q9UK05 429 aaPredicted RBP7.34□□□□□ -1.23
COMMD6-211ENST00000486516 ESPNB1AK53 854 aa7.33□□□□□ -1.24
COMMD6-211ENST00000486516 C2CD2LO14523 706 aa7.33□□□□□ -1.24
COMMD6-211ENST00000486516 GNB5O14775 395 aa7.33□□□□□ -1.24
COMMD6-211ENST00000486516 GPC1P35052 558 aa7.33□□□□□ -1.24
COMMD6-211ENST00000486516 SLC27A3Q5K4L6 730 aa7.33□□□□□ -1.24
COMMD6-211ENST00000486516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.33□□□□□ -1.24
COMMD6-211ENST00000486516 CFHR5Q9BXR6 569 aa7.33□□□□□ -1.24
COMMD6-211ENST00000486516 TIMMDC1Q9NPL8 285 aa7.33□□□□□ -1.24
COMMD6-211ENST00000486516 ZMYND10O75800 440 aa7.32□□□□□ -1.24
COMMD6-211ENST00000486516 F11P03951 625 aa7.32□□□□□ -1.24
COMMD6-211ENST00000486516 GPAMQ9HCL2 828 aa7.32□□□□□ -1.24
COMMD6-211ENST00000486516 GGA1Q9UJY5 639 aa7.32□□□□□ -1.24
COMMD6-211ENST00000486516 RSPO4Q2I0M5 234 aaPredicted RBP7.31□□□□□ -1.24
COMMD6-211ENST00000486516 DZIP3Q86Y13 1208 aaKnown RBP7.31□□□□□ -1.24
COMMD6-211ENST00000486516 GOLGA6L1Q8N7Z2 621 aa7.31□□□□□ -1.24
COMMD6-211ENST00000486516 BTBD6Q96KE9 485 aa7.31□□□□□ -1.24
COMMD6-211ENST00000486516 GRIP2Q9C0E4 1043 aa7.31□□□□□ -1.24
COMMD6-211ENST00000486516 ZC3H4Q9UPT8 1303 aaKnown RBP7.3□□□□□ -1.24
COMMD6-211ENST00000486516 DGKGP49619 791 aa7.3□□□□□ -1.24
COMMD6-211ENST00000486516 UBAP2LQ14157 1087 aaKnown RBP7.3□□□□□ -1.24
COMMD6-211ENST00000486516 EPS8L1Q8TE68 723 aa7.3□□□□□ -1.24
COMMD6-211ENST00000486516 ZFP64Q9NPA5 681 aa7.3□□□□□ -1.24
COMMD6-211ENST00000486516 TRIM66O15016 1216 aa7.29□□□□□ -1.24
COMMD6-211ENST00000486516 GATA4P43694 442 aa7.29□□□□□ -1.24
COMMD6-211ENST00000486516 CLK2P49760 499 aaKnown RBP7.29□□□□□ -1.24
COMMD6-211ENST00000486516 ARTNQ5T4W7 220 aa7.29□□□□□ -1.24
COMMD6-211ENST00000486516 FBXO31Q5XUX0 539 aaPredicted RBP7.29□□□□□ -1.24
COMMD6-211ENST00000486516 SLCO4C1Q6ZQN7 724 aa7.29□□□□□ -1.24
COMMD6-211ENST00000486516 GPSM3Q9Y4H4 160 aa7.29□□□□□ -1.24
COMMD6-211ENST00000486516 SPATA31C2B4DYI2 1134 aa7.28□□□□□ -1.24
COMMD6-211ENST00000486516 WASLO00401 505 aaPredicted RBP7.28□□□□□ -1.24
COMMD6-211ENST00000486516 BMP4P12644 408 aa7.28□□□□□ -1.24
COMMD6-211ENST00000486516 NLRP3Q96P20 1036 aa7.28□□□□□ -1.24
COMMD6-211ENST00000486516 POLR3EQ9NVU0 708 aa7.28□□□□□ -1.24
COMMD6-211ENST00000486516 EPXP11678 715 aa7.27□□□□□ -1.25
COMMD6-211ENST00000486516 PLCB2Q00722 1185 aa7.27□□□□□ -1.25
COMMD6-211ENST00000486516 CTBSQ01459 385 aa7.27□□□□□ -1.25
COMMD6-211ENST00000486516 NKAPLQ5M9Q1 402 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms